Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14l19
(639 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.4
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 2.5
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 23 2.5
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 2.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.6
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.6
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 7.6
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 7.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 7.6
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.6
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 98 LELPQSMVAGHKPQHAR-HIS 157
+ELPQ V GH+ +H+ H+S
Sbjct: 183 VELPQFRVLGHRQRHSTIHLS 203
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 277 HWPSATTAADVFPVSIAILYGLLCIL 200
HW + F + +AI+Y +L I+
Sbjct: 45 HWRAFPAPGKHFHIGLAIIYSMLLIM 70
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 23.0 bits (47), Expect = 2.5
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 448 KSSVMLKFGFAPERSLTIYRLLYSNHFVHKKPKYHNIATRPETSYLKIHTN 600
K+ M+K + PE +L + ++ N P++ N +Y+ + TN
Sbjct: 53 KTMAMMKGEYIPENALPVGIEIWRNKLFVTVPRWRN-GIPATLTYISLDTN 102
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 2.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -3
Query: 277 HWPSATTAADVFPVSIAILYGLLCIL 200
HW + F + +AI+Y +L I+
Sbjct: 45 HWRAFPAPGKHFHIGLAIIYSMLLIM 70
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 171 HLGASATGVNSIHKSPYKIAMETGNTSAAVVADGQCAQILI 293
H GA G+ + Y + ++ NT++ + A Q QI I
Sbjct: 522 HSGAVVAGIVGLKMPRYCLFGDSVNTASRMEATSQAMQIHI 562
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 548 TIISQPDQKLVTLKSIQTHL 607
T++S P K T+K ++ HL
Sbjct: 900 TVVSPPPTKRRTMKVVKYHL 919
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 548 TIISQPDQKLVTLKSIQTHL 607
T++S P K T+K ++ HL
Sbjct: 938 TVVSPPPTKRRTMKVVKYHL 957
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/33 (27%), Positives = 18/33 (54%)
Frame = -1
Query: 597 CMDFKVTSFWSGCDIMVFRFFMYKVIRIQ*SVN 499
C+ +FWS + +F+ K+I I+ S++
Sbjct: 387 CLTVVCLAFWSFIVSTILLWFINKIIPIRMSIH 419
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 431 GAECCSE*SCEIHLSISNLTL 369
G E C + C + +S N+T+
Sbjct: 118 GKEACKQGVCTVEVSSENMTV 138
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -2
Query: 431 GAECCSE*SCEIHLSISNLTL 369
G E C + C + +S N+T+
Sbjct: 118 GKEACKQGVCTVEVSSENMTV 138
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2
Query: 527 LYIKNLNTIISQPDQKL 577
LY N N IIS+P +++
Sbjct: 363 LYQYNFNIIISEPTERI 379
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/29 (24%), Positives = 16/29 (55%)
Frame = +1
Query: 523 HFVHKKPKYHNIATRPETSYLKIHTNTPV 609
H +P++++I++ P+ +IH V
Sbjct: 890 HLTPLQPRFYSISSSPDVHQGQIHLTVAV 918
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,025
Number of Sequences: 438
Number of extensions: 4494
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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