Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14l10
(720 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 24 1.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.7
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 24 1.7
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 24 1.7
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 24 1.7
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 2.2
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 2.2
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.2
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.8
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 22 6.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 21 8.9
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 24.2 bits (50), Expect = 1.3
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = -1
Query: 609 EVRKQCTKNLSYCVRNNRFMCVSKGRYIDIKNNDLYY--ICVRNGN---RTFVRYTFQCQ 445
++ KQ + N+ Y +NN ++ + +Y I N DL + + R N +RYT +C+
Sbjct: 355 KIIKQISSNI-YERQNNEYIWIVSNKYQKIANGDLNFNEVNFRILNAPVNQLIRYT-RCE 412
Query: 444 N 442
N
Sbjct: 413 N 413
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 1.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -1
Query: 381 SKIVVTKVKKDKEKL--AIKKSAKSESSRKNSDQSINQNNSGES 256
SK+ KVKKDK+ + K+S +S ++ N N S S
Sbjct: 692 SKLFAKKVKKDKDIILNVPKESTQSLTTTGNVSYLTTNNTSNNS 735
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 423 ILVRCLPITSSDNVSKI 373
++ +CLP + SDN +KI
Sbjct: 110 VMGKCLPTSGSDNCNKI 126
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 423 ILVRCLPITSSDNVSKI 373
++ +CLP + SDN +KI
Sbjct: 110 VMGKCLPTSGSDNCNKI 126
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 216 HHHIQTQSI-HCFYQIP 263
HHH QTQS+ H Y+ P
Sbjct: 353 HHHHQTQSLQHLHYRQP 369
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 23.4 bits (48), Expect = 2.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -1
Query: 339 LAIKKSAKSESSRKNSDQSINQNNSGESDK 250
L S S +S +NSD+S + ESD+
Sbjct: 178 LGTASSTSSTASSRNSDRSAGSPSVSESDE 207
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 639 GRCPENTVFSEVRKQCTK 586
G+CP N +FS +C +
Sbjct: 35 GKCPSNEIFSRCDGRCQR 52
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 23.4 bits (48), Expect = 2.2
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 639 GRCPENTVFSEVRKQCTK 586
G+CP N +FS +C +
Sbjct: 35 GKCPSNEIFSRCDGRCQR 52
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 197 GSEYFPTSSHTDSINSLFLS 256
G EY+ S HTD NS L+
Sbjct: 786 GKEYYAASFHTDIGNSQSLA 805
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.8 bits (44), Expect = 6.7
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -3
Query: 655 KTTYYWKVPRKHSIQ*SKKTMHKKLIIL 572
K +W PR+ + SK +H+K ++L
Sbjct: 41 KRKRWWSRPREPAQTTSKAGIHRKKVLL 68
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.4 bits (43), Expect = 8.9
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -1
Query: 309 SSRKNSDQSINQNNSGESDKNS 244
S+ N++ + N NN+G +D +
Sbjct: 238 SNNNNNNNNNNNNNNGANDNGN 259
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,612
Number of Sequences: 438
Number of extensions: 3593
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -