Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14k21
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86198-1|BAA25646.1| 260|Homo sapiens dolichol-phosphate-mannos... 200 3e-51
CR456926-1|CAG33207.1| 260|Homo sapiens DPM1 protein. 200 3e-51
BC016322-1|AAH16322.1| 260|Homo sapiens dolichyl-phosphate mann... 200 3e-51
BC008466-1|AAH08466.1| 260|Homo sapiens dolichyl-phosphate mann... 200 3e-51
BC007073-1|AAH07073.1| 260|Homo sapiens dolichyl-phosphate mann... 200 3e-51
AL034553-4|CAB53749.1| 260|Homo sapiens dolichyl-phosphate mann... 200 3e-51
AF007875-1|AAC98797.1| 253|Homo sapiens dolichol monophosphate ... 196 4e-50
AL034553-5|CAI23326.2| 294|Homo sapiens dolichyl-phosphate mann... 174 3e-43
AL034553-3|CAI23324.1| 287|Homo sapiens dolichyl-phosphate mann... 170 3e-42
AL034553-6|CAI23327.2| 221|Homo sapiens dolichyl-phosphate mann... 113 4e-25
>D86198-1|BAA25646.1| 260|Homo sapiens dolichol-phosphate-mannose
synthase protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>CR456926-1|CAG33207.1| 260|Homo sapiens DPM1 protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>BC016322-1|AAH16322.1| 260|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>BC008466-1|AAH08466.1| 260|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQMNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>BC007073-1|AAH07073.1| 260|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>AL034553-4|CAB53749.1| 260|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 260
Score = 200 bits (489), Expect = 3e-51
Identities = 93/112 (83%), Positives = 103/112 (91%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GGVYGWD KRK+ISRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYV
Sbjct: 149 KGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYV 208
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 209 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>AF007875-1|AAC98797.1| 253|Homo sapiens dolichol monophosphate
mannose synthase protein.
Length = 253
Score = 196 bits (479), Expect = 4e-50
Identities = 91/112 (81%), Positives = 101/112 (90%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYV 463
+G+GG+YGWD KRK+ISRGANFLTQ++L PG SDLTGSFRLY KEVLEKLI CVSKGYV
Sbjct: 142 KGNGGIYGWDLKRKIISRGANFLTQILLTPGASDLTGSFRLYPKEVLEKLIEKCVSKGYV 201
Query: 462 FQMEMIIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
FQMEMI+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 202 FQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 253
>AL034553-5|CAI23326.2| 294|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 294
Score = 174 bits (423), Expect = 3e-43
Identities = 84/107 (78%), Positives = 94/107 (87%), Gaps = 3/107 (2%)
Frame = -1
Query: 618 WDFK---RKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYVFQMEM 448
WD++ +L SRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYVFQMEM
Sbjct: 188 WDYRCEPPRLASRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEM 247
Query: 447 IIRARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
I+RARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 248 IVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 294
Score = 37.9 bits (84), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRG 586
+G+GGVYGWD KRK+IS G
Sbjct: 148 KGNGGVYGWDLKRKIISDG 166
>AL034553-3|CAI23324.1| 287|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 287
Score = 170 bits (414), Expect = 3e-42
Identities = 83/104 (79%), Positives = 91/104 (87%)
Frame = -1
Query: 618 WDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYVFQMEMIIR 439
WD+ SRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYVFQMEMI+R
Sbjct: 189 WDY-----SRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVR 243
Query: 438 ARQFDYSIGEVPISFVDRVYGESKLGGSEIVQFAKALLYLFATT 307
ARQ +Y+IGEVPISFVDRVYGESKLGG+EIV F K LL LFATT
Sbjct: 244 ARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 287
Score = 37.9 bits (84), Expect = 0.031
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -1
Query: 642 RGSGGVYGWDFKRKLISRG 586
+G+GGVYGWD KRK+IS G
Sbjct: 149 KGNGGVYGWDLKRKIISDG 167
>AL034553-6|CAI23327.2| 221|Homo sapiens dolichyl-phosphate
mannosyltransferase polypeptide 1, catalytic subunit
protein.
Length = 221
Score = 113 bits (273), Expect = 4e-25
Identities = 54/70 (77%), Positives = 61/70 (87%)
Frame = -1
Query: 618 WDFKRKLISRGANFLTQLMLRPGVSDLTGSFRLYKKEVLEKLILSCVSKGYVFQMEMIIR 439
WD+ SRGANFLTQ++LRPG SDLTGSFRLY+KEVLEKLI CVSKGYVFQMEMI+R
Sbjct: 157 WDY-----SRGANFLTQILLRPGASDLTGSFRLYRKEVLEKLIEKCVSKGYVFQMEMIVR 211
Query: 438 ARQFDYSIGE 409
ARQ +Y+IGE
Sbjct: 212 ARQLNYTIGE 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,532,504
Number of Sequences: 237096
Number of extensions: 1637482
Number of successful extensions: 2767
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2767
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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