Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14k16
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16135-1|CAA34261.1| 558|Homo sapiens protein ( Human mRNA for ... 86 1e-16
BC069184-1|AAH69184.1| 558|Homo sapiens HNRPL protein protein. 86 1e-16
AB044547-1|BAB18649.1| 589|Homo sapiens heterogeneous nuclear r... 86 1e-16
BC017480-1|AAH17480.1| 542|Homo sapiens heterogeneous nuclear r... 64 3e-10
AY236963-1|AAQ20084.2| 537|Homo sapiens stromal RNA regulating ... 64 3e-10
AY236962-1|AAQ20083.1| 508|Homo sapiens stromal RNA regulating ... 64 3e-10
AF461722-1|AAN76189.1| 537|Homo sapiens BLOCK24 variant protein. 64 3e-10
AC011247-1|AAY24302.1| 542|Homo sapiens unknown protein. 64 3e-10
BC016582-1|AAH16582.1| 532|Homo sapiens polypyrimidine tract bi... 34 0.42
AL357150-4|CAH70267.1| 537|Homo sapiens polypyrimidine tract bi... 34 0.42
AL357150-2|CAH70268.1| 532|Homo sapiens polypyrimidine tract bi... 34 0.42
AF530580-1|AAM94624.1| 537|Homo sapiens non-neuronal splice var... 34 0.42
AB051232-1|BAB71742.1| 532|Homo sapiens PTB-like protein L prot... 34 0.42
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 34 0.55
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 34 0.55
AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa... 34 0.55
AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa... 34 0.55
X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein... 33 0.97
X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract bin... 33 0.97
X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract bin... 33 0.97
X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract bin... 33 0.97
X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-bind... 33 0.97
BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract bi... 33 0.97
BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract bi... 33 0.97
BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract bi... 33 0.97
BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract bi... 33 0.97
AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein. 33 0.97
AL357150-5|CAH70269.1| 531|Homo sapiens polypyrimidine tract bi... 32 1.7
AL357150-3|CAH70266.1| 536|Homo sapiens polypyrimidine tract bi... 32 1.7
AF530581-1|AAM94625.1| 536|Homo sapiens non-neuronal splice var... 32 1.7
AF176085-1|AAF14284.1| 531|Homo sapiens neural polypyrimidine t... 32 1.7
BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated prot... 30 6.8
BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated prot... 30 6.8
BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein. 30 6.8
AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of diffe... 30 6.8
AL158824-9|CAI12354.1| 457|Homo sapiens ROD1 regulator of diffe... 30 6.8
AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of diffe... 30 6.8
AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of diffe... 30 6.8
AL136967-3|CAC09454.3| 276|Homo sapiens natural cytotoxicity tr... 30 6.8
AL136967-2|CAC09452.3| 270|Homo sapiens natural cytotoxicity tr... 30 6.8
AL136967-1|CAC09453.3| 258|Homo sapiens natural cytotoxicity tr... 30 6.8
AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated prot... 30 6.8
AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated prot... 30 6.8
AJ406935-1|CAC27574.1| 98|Homo sapiens keratin associated prot... 30 6.8
AJ225109-1|CAB39168.1| 276|Homo sapiens NK cell activating rece... 30 6.8
AJ010100-1|CAB52290.1| 270|Homo sapiens NKp44RG2 protein. 30 6.8
AJ010099-1|CAB52289.1| 258|Homo sapiens NKp44RG1 protein. 30 6.8
AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein. 30 6.8
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 30 9.0
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 30 9.0
BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated prot... 30 9.0
BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated prot... 30 9.0
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 30 9.0
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 30 9.0
AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated prot... 30 9.0
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 30 9.0
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 30 9.0
>X16135-1|CAA34261.1| 558|Homo sapiens protein ( Human mRNA for
novel heterogeneous nuclear RNP protein, L protein. ).
Length = 558
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = -3
Query: 690 RIQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQ 511
RIQ P VLHFFN P +V++E ++ + GV P ++ F KSERSSSGL+E+++ S
Sbjct: 464 RIQHPSNVLHFFNAPLEVTEENFFEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSD 523
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSR 415
++ + NH +++P +P+ +KLCFS+++
Sbjct: 524 ALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQ 555
>BC069184-1|AAH69184.1| 558|Homo sapiens HNRPL protein protein.
Length = 558
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = -3
Query: 690 RIQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQ 511
RIQ P VLHFFN P +V++E ++ + GV P ++ F KSERSSSGL+E+++ S
Sbjct: 464 RIQHPSNVLHFFNAPLEVTEENFFEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSD 523
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSR 415
++ + NH +++P +P+ +KLCFS+++
Sbjct: 524 ALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQ 555
>AB044547-1|BAB18649.1| 589|Homo sapiens heterogeneous nuclear
ribonucleoprotein L protein.
Length = 589
Score = 86.2 bits (204), Expect = 1e-16
Identities = 37/92 (40%), Positives = 61/92 (66%)
Frame = -3
Query: 690 RIQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQ 511
RIQ P VLHFFN P +V++E ++ + GV P ++ F KSERSSSGL+E+++ S
Sbjct: 495 RIQHPSNVLHFFNAPLEVTEENFFEICDELGVKRPSSVKVFSGKSERSSSGLLEWESKSD 554
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSR 415
++ + NH +++P +P+ +KLCFS+++
Sbjct: 555 ALETLGFLNHYQMKNPNGPYPYTLKLCFSTAQ 586
>BC017480-1|AAH17480.1| 542|Homo sapiens heterogeneous nuclear
ribonucleoprotein L-like protein.
Length = 542
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLK-SERSSSGLMEFQNISQ 511
IQPP VLH++N P V++E ++ D+ V F K S ++ SGL+E++ +
Sbjct: 449 IQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD 508
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQI 409
+V A+ A NH I+ P P+ +KLCFS+S +
Sbjct: 509 AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL 542
>AY236963-1|AAQ20084.2| 537|Homo sapiens stromal RNA regulating
factor protein.
Length = 537
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLK-SERSSSGLMEFQNISQ 511
IQPP VLH++N P V++E ++ D+ V F K S ++ SGL+E++ +
Sbjct: 444 IQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD 503
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQI 409
+V A+ A NH I+ P P+ +KLCFS+S +
Sbjct: 504 AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL 537
>AY236962-1|AAQ20083.1| 508|Homo sapiens stromal RNA regulating
factor protein.
Length = 508
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLK-SERSSSGLMEFQNISQ 511
IQPP VLH++N P V++E ++ D+ V F K S ++ SGL+E++ +
Sbjct: 415 IQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD 474
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQI 409
+V A+ A NH I+ P P+ +KLCFS+S +
Sbjct: 475 AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL 508
>AF461722-1|AAN76189.1| 537|Homo sapiens BLOCK24 variant protein.
Length = 537
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLK-SERSSSGLMEFQNISQ 511
IQPP VLH++N P V++E ++ D+ V F K S ++ SGL+E++ +
Sbjct: 444 IQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD 503
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQI 409
+V A+ A NH I+ P P+ +KLCFS+S +
Sbjct: 504 AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL 537
>AC011247-1|AAY24302.1| 542|Homo sapiens unknown protein.
Length = 542
Score = 64.5 bits (150), Expect = 3e-10
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLK-SERSSSGLMEFQNISQ 511
IQPP VLH++N P V++E ++ D+ V F K S ++ SGL+E++ +
Sbjct: 449 IQPPSCVLHYYNVPLCVTEETFTKLCNDHEVLTFIKYKVFDAKPSAKTLSGLLEWECKTD 508
Query: 510 SVMAIMACNHATIQHPGAKFPFVMKLCFSSSRQI 409
+V A+ A NH I+ P P+ +KLCFS+S +
Sbjct: 509 AVEALTALNHYQIRVPNGSNPYTLKLCFSTSSHL 542
>BC016582-1|AAH16582.1| 532|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 532
Score = 34.3 bits (75), Expect = 0.42
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F L++ + ++
Sbjct: 450 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQRDHKMALLQMATVEEA 505
Query: 507 VMAIM 493
+ A++
Sbjct: 506 IQALI 510
>AL357150-4|CAH70267.1| 537|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.42
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F L++ + ++
Sbjct: 455 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQRDHKMALLQMATVEEA 510
Query: 507 VMAIM 493
+ A++
Sbjct: 511 IQALI 515
>AL357150-2|CAH70268.1| 532|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 532
Score = 34.3 bits (75), Expect = 0.42
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F L++ + ++
Sbjct: 450 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQRDHKMALLQMATVEEA 505
Query: 507 VMAIM 493
+ A++
Sbjct: 506 IQALI 510
>AF530580-1|AAM94624.1| 537|Homo sapiens non-neuronal splice
variant nPTB3 protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.42
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F L++ + ++
Sbjct: 455 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQRDHKMALLQMATVEEA 510
Query: 507 VMAIM 493
+ A++
Sbjct: 511 IQALI 515
>AB051232-1|BAB71742.1| 532|Homo sapiens PTB-like protein L
protein.
Length = 532
Score = 34.3 bits (75), Expect = 0.42
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F L++ + ++
Sbjct: 450 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQRDHKMALLQMATVEEA 505
Query: 507 VMAIM 493
+ A++
Sbjct: 506 IQALI 510
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform
B protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 1546
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 1546
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A
(autosomal recessive, mild) protein.
Length = 5202
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 33.9 bits (74), Expect = 0.55
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 4/38 (10%)
Frame = +3
Query: 246 SGQCVC----VAFRLDMCEFVFCAASPFNSIRARPCRC 347
SGQC C + R D C F F FN + PC+C
Sbjct: 712 SGQCKCKANVIGLRCDHCNFGFKFLRSFNDVGCEPCQC 749
>X66975-1|CAA47386.1| 557|Homo sapiens nuclear ribonucleoprotein
protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 475 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 530
Query: 507 VMAIM 493
V A++
Sbjct: 531 VQALI 535
>X65372-1|CAA46444.1| 557|Homo sapiens polypirimidine tract
binding protein protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 475 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 530
Query: 507 VMAIM 493
V A++
Sbjct: 531 VQALI 535
>X65371-1|CAA46443.1| 550|Homo sapiens polypirimidine tract
binding protein protein.
Length = 550
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 468 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 523
Query: 507 VMAIM 493
V A++
Sbjct: 524 VQALI 528
>X62006-1|CAA43973.1| 531|Homo sapiens polypirimidine tract
binding protein protein.
Length = 531
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 449 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 504
Query: 507 VMAIM 493
V A++
Sbjct: 505 VQALI 509
>X60648-1|CAA43056.1| 531|Homo sapiens polypyrimidine tract-binding
protein (pPTB) protein.
Length = 531
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 449 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 504
Query: 507 VMAIM 493
V A++
Sbjct: 505 VQALI 509
>BT006819-1|AAP35465.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 475 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 530
Query: 507 VMAIM 493
V A++
Sbjct: 531 VQALI 535
>BC013694-1|AAH13694.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 475 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 530
Query: 507 VMAIM 493
V A++
Sbjct: 531 VQALI 535
>BC004383-1|AAH04383.1| 531|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 531
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 449 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 504
Query: 507 VMAIM 493
V A++
Sbjct: 505 VQALI 509
>BC002397-1|AAH02397.1| 557|Homo sapiens polypyrimidine tract
binding protein 1 protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 475 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 530
Query: 507 VMAIM 493
V A++
Sbjct: 531 VQALI 535
>AC006273-1|AAC99798.1| 531|Homo sapiens PTB_HUMAN protein.
Length = 531
Score = 33.1 bits (72), Expect = 0.97
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP VS+E L +F G + F + L++ ++ ++
Sbjct: 449 IFPPSATLHLSNIPPSVSEEDLKVLFSSNG----GVVKGFKFFQKDRKMALIQMGSVEEA 504
Query: 507 VMAIM 493
V A++
Sbjct: 505 VQALI 509
>AL357150-5|CAH70269.1| 531|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F + + L++ + ++
Sbjct: 450 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQDHKMA-LLQMATVEEA 504
Query: 507 VMAIM 493
+ A++
Sbjct: 505 IQALI 509
>AL357150-3|CAH70266.1| 536|Homo sapiens polypyrimidine tract
binding protein 2 protein.
Length = 536
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F + + L++ + ++
Sbjct: 455 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQDHKMA-LLQMATVEEA 509
Query: 507 VMAIM 493
+ A++
Sbjct: 510 IQALI 514
>AF530581-1|AAM94625.1| 536|Homo sapiens non-neuronal splice
variant nPTB4 protein.
Length = 536
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F + + L++ + ++
Sbjct: 455 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQDHKMA-LLQMATVEEA 509
Query: 507 VMAIM 493
+ A++
Sbjct: 510 IQALI 514
>AF176085-1|AAF14284.1| 531|Homo sapiens neural polypyrimidine
tract binding protein protein.
Length = 531
Score = 32.3 bits (70), Expect = 1.7
Identities = 17/65 (26%), Positives = 32/65 (49%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V++E L +F + G T+ F + + L++ + ++
Sbjct: 450 IFPPSATLHLSNIPPSVAEEDLRTLFANTG----GTVKAFKFFQDHKMA-LLQMATVEEA 504
Query: 507 VMAIM 493
+ A++
Sbjct: 505 IQALI 509
>BC130562-1|AAI30563.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 68 RCCISSCCRPSCCVSSCCK 86
>BC126131-1|AAI26132.1| 195|Homo sapiens keratin associated protein
4-14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 68 RCCISSCCRPSCCVSSCCK 86
>BC044585-1|AAH44585.1| 558|Homo sapiens ROD1 protein protein.
Length = 558
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 476 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 531
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 532 IQALIELHNH 541
>AL359073-2|CAI14113.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 470 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 525
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 526 IQALIELHNH 535
>AL158824-9|CAI12354.1| 457|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 457
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 375 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 430
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 431 IQALIELHNH 440
>AL158824-8|CAI12353.1| 524|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 524
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 442 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 497
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 498 IQALIELHNH 507
>AL158824-5|CAI12350.1| 552|Homo sapiens ROD1 regulator of
differentiation 1 (S. pombe) protein.
Length = 552
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 470 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 525
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 526 IQALIELHNH 535
>AL136967-3|CAC09454.3| 276|Homo sapiens natural cytotoxicity
triggering receptor 2 protein.
Length = 276
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AL136967-2|CAC09452.3| 270|Homo sapiens natural cytotoxicity
triggering receptor 2 protein.
Length = 270
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AL136967-1|CAC09453.3| 258|Homo sapiens natural cytotoxicity
triggering receptor 2 protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AJ406944-1|CAC27583.1| 195|Homo sapiens keratin associated protein
4.14 protein.
Length = 195
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 68 RCCISSCCRPSCCVSSCCK 86
>AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated protein
4.9 protein.
Length = 191
Score = 30.3 bits (65), Expect = 6.8
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 99 RCCISSCCRPSCCVSSCCK 117
>AJ406935-1|CAC27574.1| 98|Homo sapiens keratin associated protein
4.3 protein.
Length = 98
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 668 CCISSTRPQTCLTNSCCK--CSRTT 600
CCISS +C +SCCK C +TT
Sbjct: 7 CCISSCCRPSCCISSCCKPSCCQTT 31
>AJ225109-1|CAB39168.1| 276|Homo sapiens NK cell activating
receptor (NKp44) protein.
Length = 276
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AJ010100-1|CAB52290.1| 270|Homo sapiens NKp44RG2 protein.
Length = 270
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AJ010099-1|CAB52289.1| 258|Homo sapiens NKp44RG1 protein.
Length = 258
Score = 30.3 bits (65), Expect = 6.8
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1
Query: 389 SLIRIRTRTSGKPRTTAWSSTNTI 318
+L+ IR TS KPRT AW+S TI
Sbjct: 60 ALVCIRLVTSSKPRTMAWTSRFTI 83
>AB023967-1|BAA75466.1| 521|Homo sapiens Rod1 protein.
Length = 521
Score = 30.3 bits (65), Expect = 6.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = -3
Query: 687 IQPPXKVLHFFNTPPDVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQS 508
I PP LH N PP V+ + L +F + G ++ F + L++ ++ ++
Sbjct: 439 IFPPSATLHLSNIPPSVTVDDLKNLFIEAGC----SVKAFKFFQKDRKMALIQLGSVEEA 494
Query: 507 VMAIMAC-NH 481
+ A++ NH
Sbjct: 495 IQALIELHNH 504
>D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
>BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
>BC126423-1|AAI26424.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 78 RCCISSCCRPSCCMSSCCK 96
>BC126421-1|AAI26422.1| 210|Homo sapiens keratin associated protein
4-7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 78 RCCISSCCRPSCCMSSCCK 96
>BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
>BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA binding
protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
>AJ406939-1|CAC27578.1| 210|Homo sapiens keratin associated protein
4.7 protein.
Length = 210
Score = 29.9 bits (64), Expect = 9.0
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 671 RCCISSTRPQTCLTNSCCK 615
RCCISS +C +SCCK
Sbjct: 78 RCCISSCCRPSCCMSSCCK 96
>AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RNA
binding protein protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
>AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein.
Length = 172
Score = 29.9 bits (64), Expect = 9.0
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -3
Query: 642 DVSDEQLLQVFKDYGVTPPHTISKFPLKSERSSSGLMEFQNISQSVMAIMACNHATI 472
D +++ L QVF YG + K G + F+NI + A+MA N ++
Sbjct: 16 DTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSV 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,113,484
Number of Sequences: 237096
Number of extensions: 1754150
Number of successful extensions: 5156
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 4362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5120
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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