Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14k09
(734 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0936 - 12528336-12528379,12528516-12528602,12528696-125288... 256 2e-68
05_05_0202 - 23211342-23211385,23211493-23211579,23211666-232117... 250 1e-66
03_01_0509 + 3836284-3836547,3836927-3837157,3837253-3837423,383... 239 2e-63
05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475 119 3e-27
03_05_0467 - 24615243-24615384,24619166-24619450,24619516-246195... 113 1e-25
04_04_1143 + 31202901-31203034,31203312-31203345,31203913-312039... 112 2e-25
02_01_0095 - 679597-679671,679775-679890,682241-682319,682446-68... 111 6e-25
07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520 103 1e-22
08_01_0699 - 6163662-6163680,6163865-6163943,6163979-6164048,616... 101 4e-22
08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751 65 6e-11
12_02_0652 - 21527768-21528328,21528980-21529738,21530151-215302... 33 0.31
05_06_0181 - 26178006-26178836 33 0.31
04_04_1193 + 31634043-31634349,31634685-31634847,31635048-316366... 29 3.8
03_02_0004 - 4869853-4871106 29 5.1
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 28 8.8
05_07_0206 - 28405109-28406671 28 8.8
04_04_1349 - 32811733-32813040 28 8.8
01_05_0346 + 21191542-21191783,21191988-21192072,21192159-211924... 28 8.8
>03_02_0936 -
12528336-12528379,12528516-12528602,12528696-12528809,
12528895-12529120,12529200-12529523,12529603-12529773,
12529870-12530100,12530291-12530479,12531176-12531178
Length = 462
Score = 256 bits (626), Expect = 2e-68
Identities = 121/219 (55%), Positives = 154/219 (70%), Gaps = 1/219 (0%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
IQG GG+V+ GYL A E ++ GGL +ADEVQ GF R G HFWGFETHGV PDIVTM
Sbjct: 245 IQGVGGIVELSPGYLPLAYEAVRSAGGLCIADEVQAGFARVGSHFWGFETHGVVPDIVTM 304
Query: 554 AKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKV 375
AKGIGNG PL AVVTT EIA + YFNTFGGNP+ + G AVL V+E+EGLQ N+
Sbjct: 305 AKGIGNGIPLGAVVTTPEIAQVLTRRCYFNTFGGNPLCTAGGLAVLRVLEKEGLQANAHA 364
Query: 374 VGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGV 198
VG Y +L LQ +H +IGDVRG G M+GVELV + KTP ++ E++K+ GV
Sbjct: 365 VGSYLKDRLRALQDKHEIIGDVRGTGFMLGVELVTDRQLKTP-AKDEICRAMEHMKEMGV 423
Query: 197 LIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKV 81
L+ +GG + NVFRI PP+C TK+D DF +++++ A+ K+
Sbjct: 424 LVGKGGFYGNVFRITPPLCFTKEDADFFVAVMDSALSKL 462
>05_05_0202 -
23211342-23211385,23211493-23211579,23211666-23211779,
23211886-23212111,23212222-23212401,23212511-23212654,
23212818-23212979,23213093-23213296,23214109-23214156,
23214601-23214846
Length = 484
Score = 250 bits (611), Expect = 1e-66
Identities = 113/218 (51%), Positives = 155/218 (71%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
IQG GG+V+ GYL +++K GGL +ADEVQ G RTG HFWGFE+HGV PDIVTM
Sbjct: 267 IQGVGGIVELAPGYLPAVYNMVRKAGGLCIADEVQAGVARTGSHFWGFESHGVIPDIVTM 326
Query: 554 AKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKV 375
AKGIGNG P+ AVVTT EIA + +YFNTFGGNP+++ G AVL+V+E+E LQ+N+ V
Sbjct: 327 AKGIGNGIPIGAVVTTPEIAQVLTRRSYFNTFGGNPVSTAGGHAVLKVLEKEKLQENAFV 386
Query: 374 VGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVL 195
VG Y +L L+++H +IGDVRG+G ++GVELV K ++ + ++KD GVL
Sbjct: 387 VGSYLKERLNKLKEKHDIIGDVRGKGFLLGVELVTDRQKKTPAKVEIGHVMNHMKDMGVL 446
Query: 194 IARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIKKV 81
+ +GG + NVFR+ PP+C TK+D DF I ++ ++ K+
Sbjct: 447 VGKGGFYGNVFRVTPPLCFTKEDSDFFIEAMDISLSKL 484
>03_01_0509 +
3836284-3836547,3836927-3837157,3837253-3837423,
3838379-3838522,3838640-3838819,3838926-3839151,
3839326-3839439,3839541-3839627,3839711-3839754
Length = 486
Score = 239 bits (585), Expect = 2e-63
Identities = 114/215 (53%), Positives = 153/215 (71%), Gaps = 1/215 (0%)
Frame = -1
Query: 731 QGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMA 552
QG GG V+ GYLK A + ++K GG+ +ADEVQ+GFGRTG H+WGF+T V PDIVTMA
Sbjct: 270 QGVGGAVELAPGYLKLAYDTVRKAGGVCIADEVQSGFGRTGSHYWGFQTQDVIPDIVTMA 329
Query: 551 KGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKVV 372
KGIGNG PL AVVTT EIA A+ FNTFGGNP+ S G AVL+V+++E Q + V
Sbjct: 330 KGIGNGLPLGAVVTTPEIANVLAQKIQFNTFGGNPVCSVGGLAVLKVLDKEKRQAHCADV 389
Query: 371 GEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELV-EPGTKTPLTTSKVNDIHENIKDNGVL 195
G + + +L +LQ++H +IGDVRG+GLM+GVELV + KTP ++ N + E +KD +L
Sbjct: 390 GSHLVNRLKELQQKHEIIGDVRGRGLMLGVELVTDRKEKTP-AKAETNLLFEKLKDLNIL 448
Query: 194 IARGGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
+ +GG NVFRIKPPMC T+ D D+ + ++ A+
Sbjct: 449 VGKGGLHGNVFRIKPPMCFTRDDADYLVDAMDYAM 483
>05_01_0220 + 1644608-1645036,1645147-1645578,1645939-1646475
Length = 465
Score = 119 bits (286), Expect = 3e-27
Identities = 67/215 (31%), Positives = 114/215 (53%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
+QG GG+ K +L+ ++ + G L V DEVQ G GRTG + W +E +GV PDI+T+
Sbjct: 255 VQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEAYGVLPDIMTL 313
Query: 554 AKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKV 375
AK + G P+ V+ T+++A+ + TFGG P+ L+ I++ G
Sbjct: 314 AKPLAGGLPIGVVLVTEKVASAINFGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAK 373
Query: 374 VGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTKTPLTTSKVNDIHENIKDNGVL 195
GE F + L + + ++RG GL++G+EL P PL + + D GV+
Sbjct: 374 KGENFKQLLSTKLSGNAHVKEIRGIGLIVGIELDVPA--GPLVDACL--------DRGVI 423
Query: 194 IARGGRFNNVFRIKPPMCITKQDVDFGISIINDAI 90
+ G+ NV R+ PP+ I++++++ +I D +
Sbjct: 424 VLTAGK-GNVVRLVPPLIISEKELEQAAEVIRDCL 457
>03_05_0467 -
24615243-24615384,24619166-24619450,24619516-24619596,
24619807-24619904,24620038-24620190,24620705-24620760,
24620844-24621003,24621416-24621646,24621795-24621903,
24622642-24622799
Length = 490
Score = 113 bits (273), Expect = 1e-25
Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 19/235 (8%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
IQG GV+ P GYLK ++L ++ L +ADE+QTG RTG + ++PD+V +
Sbjct: 233 IQGEAGVIIPPDGYLKAVRDLCSRHNILMIADEIQTGIARTGKML-ACDWENIRPDVVIL 291
Query: 554 AKGIGNGF-PLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSK 378
K +G G P++AV+ K+I + +TFGGNP+AS V A L+V+ +EGL ++
Sbjct: 292 GKALGAGVVPVSAVLADKDIMLCIKPGEHGSTFGGNPLASAVAVASLKVVTDEGLVESCM 351
Query: 377 VVGEY-----------------FIRQLMDLQKQHP-VIGDVRGQGLMIGVELVEPGTKTP 252
+V EY F QL +Q++ P +I +VRG+GL+ V+L +
Sbjct: 352 IVYEYLSSKHLLNYRAAKLGQEFRDQLQKVQQRFPQIIREVRGRGLLNAVDL----SNEA 407
Query: 251 LTTSKVNDIHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 87
L+ + DI +K+ GVL + + R+ PP+ I+ +++ +D ++
Sbjct: 408 LSPASAYDICIKLKERGVLAK--PTHDTIIRLAPPLSISPEELAEASKAFSDVLE 460
>04_04_1143 + 31202901-31203034,31203312-31203345,31203913-31203985,
31204090-31204187,31204356-31204448,31205081-31205154,
31205680-31205768,31205859-31205935,31206016-31206090,
31206438-31206485,31206571-31206654,31206734-31206821,
31206896-31206974,31207072-31207162,31207724-31207802,
31208219-31208334,31208430-31208488,31210292-31210342,
31211418-31211444,31211725-31211809,31211952-31212024,
31212154-31212251,31212385-31212477,31212972-31213045,
31213258-31213296,31213410-31213498,31213583-31213707,
31213750-31213824,31214225-31214272,31214359-31214442,
31214574-31214661,31214762-31214840,31214930-31215020,
31215113-31215191,31215485-31215600,31215910-31215987
Length = 960
Score = 112 bits (270), Expect = 2e-25
Identities = 69/227 (30%), Positives = 124/227 (54%), Gaps = 11/227 (4%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
+ GAGGV+ PK Y +K Q ++KK L++ADEV T FGR G F G + + +KPD+V+M
Sbjct: 724 VMGAGGVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGTMF-GSDMYNIKPDLVSM 782
Query: 554 AKGIGNGF-PLAAVVTTKEIA-ANHAKA------AYFNTFGGNPMASTVGKAVLEVIEEE 399
AK + + + P+ A++ + EI+ H+++ A+ T+ G+P+A V L++ +E
Sbjct: 783 AKALSSAYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQER 842
Query: 398 GLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVND 228
+ + K + F ++ + P++G++RG GL++G E + P P
Sbjct: 843 NIPDHVKQISPRF-QEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAI 901
Query: 227 IHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 87
+ G+L+ G +N+ + PP+ +T +V+ +SI DA+K
Sbjct: 902 FGAECQKRGMLVRVAG--DNIM-MSPPLIMTPDEVEELVSIYGDALK 945
Score = 102 bits (244), Expect = 3e-22
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 11/225 (4%)
Frame = -1
Query: 728 GAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAK 549
GAGGV+ PK Y +K Q +++K L++ADEV TGFGR G F G + + +KPD+V++AK
Sbjct: 235 GAGGVIPPPKTYFEKIQAVLQKYDVLFIADEVITGFGRLGTMF-GSDLYNIKPDLVSLAK 293
Query: 548 GIGNGF-PLAAVVTTKEIA----ANHAKAAYFN---TFGGNPMASTVGKAVLEVIEEEGL 393
+ + + P+ A + + EI+ + K +F T+ G+P++ V L++ E +
Sbjct: 294 ALSSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALEALKIYRERNI 353
Query: 392 QQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELV---EPGTKTPLTTSKVNDIH 222
+ K + F ++ + +IG+ RG GL++ E P P+
Sbjct: 354 PAHVKQISPRF-QEGIKAFAGSSIIGETRGVGLLLATEFANNKSPNDPFPVEWGVAQIFG 412
Query: 221 ENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 87
K G+L+ G + + PP+ +++++VD +SI +A+K
Sbjct: 413 AECKKRGMLVKVVG---DEIAMSPPLIMSQREVDGLVSIYGEALK 454
>02_01_0095 -
679597-679671,679775-679890,682241-682319,682446-682539,
682638-682716,682846-682933,683023-683106,683351-683398,
684044-684118,684274-684315,684347-684416,684551-684589,
685118-685191,686936-687028,687203-687300,688170-688236
Length = 406
Score = 111 bits (267), Expect = 6e-25
Identities = 67/225 (29%), Positives = 119/225 (52%), Gaps = 11/225 (4%)
Frame = -1
Query: 728 GAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTMAK 549
GAGGV+ PK Y +K Q ++KK L++ DEV TGFGR G F G + + +KPD+V++AK
Sbjct: 172 GAGGVILPPKTYFEKIQAVVKKYDILFIVDEVITGFGRLGTMF-GSDLYNIKPDLVSLAK 230
Query: 548 GIGNGF-PLAAVVTTKEIA---ANHAKA----AYFNTFGGNPMASTVGKAVLEVIEEEGL 393
+ + + P+ A++ + EI+ +H+ A+ T+ G+P++ V L++ E +
Sbjct: 231 ALSSAYAPIGAILVSPEISDVIHSHSNKLGTFAHGFTYSGHPVSCAVALEALKIYRERDI 290
Query: 392 QQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVNDIH 222
+ V + F + P++G+ RG GL+I E + P P
Sbjct: 291 PGHVTHVAQRFQEGIKAFAAGSPIVGETRGVGLLIATEFTDNKSPYELFPFEWGVGEIFG 350
Query: 221 ENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 87
+ K G+++ G N+ + PP+ IT++++D +SI +A+K
Sbjct: 351 QECKKRGMMVKVLG---NLIAMSPPLIITREEIDKLVSIYGEALK 392
>07_03_0274 - 16155728-16156180,16156542-16156958,16157044-16157520
Length = 448
Score = 103 bits (248), Expect = 1e-22
Identities = 53/156 (33%), Positives = 85/156 (54%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
+QG GG+ K +L+ ++ + G L V DEVQ G GRTG + W +E +GV PDI+T+
Sbjct: 266 MQGEGGIHSATKEFLQGLRDACDEAGALLVFDEVQCGLGRTG-YLWAYEAYGVVPDIMTL 324
Query: 554 AKGIGNGFPLAAVVTTKEIAANHAKAAYFNTFGGNPMASTVGKAVLEVIEEEGLQQNSKV 375
AK + G P+ V+ T+++A+ + TFGG P+ L+ I++ G
Sbjct: 325 AKPLAGGLPIGVVLVTEKVASAINYGDHGTTFGGGPLVCQAALTTLDKIQKPGFLAEVAK 384
Query: 374 VGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEP 267
GE F + L + + ++RG GL++G+EL P
Sbjct: 385 KGENFKQLLSTKLSGNAHVKEIRGIGLIVGIELDVP 420
>08_01_0699 -
6163662-6163680,6163865-6163943,6163979-6164048,
6164151-6164266,6164656-6164734,6164831-6164921,
6165006-6165084,6165161-6165248,6165371-6165454,
6165544-6165591,6166118-6166192,6166286-6166362,
6166460-6166548,6166711-6166749,6167133-6167206,
6167496-6167588,6167820-6167917,6168100-6168172,
6168322-6168406,6168513-6168634,6169307-6169414,
6169537-6169608
Length = 585
Score = 101 bits (243), Expect = 4e-22
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 11/227 (4%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
+ GAGGV+ PK Y +K Q ++KK L +ADEV T FGR G F G + + +KPD+V++
Sbjct: 319 VMGAGGVIPPPKTYFEKIQAVLKKYDILLIADEVITAFGRLGTMF-GCDMYDIKPDLVSI 377
Query: 554 AKGIGNGF-PLAAVVTTKEIA------ANH-AKAAYFNTFGGNPMASTVGKAVLEVIEEE 399
AK + + + P+ A++ + EI +N A+ T+ G+P++ V L++ +E
Sbjct: 378 AKALSSAYMPIGAILVSPEITDVIYSQSNKLGSFAHGFTYSGHPVSCAVAIEALKIYKER 437
Query: 398 GLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVE---PGTKTPLTTSKVND 228
+ ++ + + F ++ + P++G++RG GL++G E V+ P P +
Sbjct: 438 NIIEHVQKIAPRF-QEGIKAFSGSPIVGEIRGLGLILGTEFVDNKSPNDPFPAEWGVGSL 496
Query: 227 IHENIKDNGVLIARGGRFNNVFRIKPPMCITKQDVDFGISIINDAIK 87
+ G+LI G +N+ + PP+ +T +V+ I DA+K
Sbjct: 497 FGAECEKRGMLIRVAG--DNIM-LSPPLIMTPDEVEEIICKYGDALK 540
>08_02_1375 - 26524373-26525440,26525566-26525739,26526557-26526751
Length = 478
Score = 64.9 bits (151), Expect = 6e-11
Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Frame = -1
Query: 734 IQGAGGVVQFPKGYLKKAQELIKKNGGLYVADEVQTGFGRTGDHFWGFETHGVKPDIVTM 555
+ G G + G+L ++L K++G L V DEV TGF + E G+ PD+ T+
Sbjct: 259 VVGNAGFIPPQPGFLNALRDLTKQDGALLVFDEVMTGFRLA--YGGAQEYFGITPDVSTL 316
Query: 554 AKGIGNGFPLAAVVTTKEIAANHAKAA---YFNTFGGNPMASTVGKAVLEVIEEEGLQQN 384
K IG G P+ A K+I A A T GNP+A T G L+ + E G
Sbjct: 317 GKIIGGGLPVGAYGGRKDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLMEPGTYDY 376
Query: 383 -SKVVGEYFIRQLMD--LQKQHPVI-GDVRGQ-GLMIGVELVEP-GTKTPLTTSKVNDIH 222
K+ G+ +R ++D + H + G +RG G V G T+K +
Sbjct: 377 LDKITGD-LVRGVLDAGAKTGHEMCGGHIRGMFGFFFTAGPVHNFGDAKKSDTAKFGRFY 435
Query: 221 ENIKDNGVLIA 189
+ + GV +A
Sbjct: 436 RGMLEEGVYLA 446
>12_02_0652 -
21527768-21528328,21528980-21529738,21530151-21530216,
21530550-21530598,21530717-21530817,21531469-21531540,
21531630-21531746,21531870-21531959,21532224-21532319,
21532429-21532482,21533210-21533290,21533382-21533581,
21533677-21533804,21533943-21533995,21534312-21534374
Length = 829
Score = 32.7 bits (71), Expect = 0.31
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = -1
Query: 428 KAVLEVIEEEGLQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPG 264
K +I E Q+N +V GEY R ++KQ + D+ G+ M+ ELV G
Sbjct: 606 KTATAIIPAELEQKNGEVDGEYIKRLKSFVEKQCNEMQDLLGRNAMLAEELVRTG 660
>05_06_0181 - 26178006-26178836
Length = 276
Score = 32.7 bits (71), Expect = 0.31
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 549 LSHRHDVGLHAVRLEAPEMISSATEACLYLISYIQATILLDQ 674
L HRHD G+ AVR +AP+++ + + I T+ L Q
Sbjct: 87 LRHRHDNGITAVRKQAPQLLRQGRKLKTMELGGITGTVFLGQ 128
>04_04_1193 +
31634043-31634349,31634685-31634847,31635048-31636622,
31636653-31637541,31639401-31641266
Length = 1599
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/38 (34%), Positives = 25/38 (65%), Gaps = 4/38 (10%)
Frame = -1
Query: 701 KGYLKKAQELIKKNGGLYVADEVQTGF----GRTGDHF 600
+G+++K+ E +++ G Y+A+ V +GF RT +HF
Sbjct: 539 QGFVEKSSERLEQKGRKYLAELVDSGFYQHVERTSEHF 576
>03_02_0004 - 4869853-4871106
Length = 417
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 115 PKSTSCLVMHIGGFILNTLLKRPPRAMSTPLSLIFSWISLTLEVVS-GVLVPGSTSSTPI 291
P S L H IL T + P A +T W +L +S G L+P +
Sbjct: 198 PTDASDLASHATVDILTTATEASPTASAT-----LQWTHGSLNALSWGFLLPVGAAVARY 252
Query: 292 MRPCPLTSP 318
+RPC T P
Sbjct: 253 LRPCASTGP 261
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 27.9 bits (59), Expect = 8.8
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 419 LEVIEEEG--LQQNSKVVGEYFIRQLMDLQKQHPVIGDVRGQGLMIGVELVEPGTK 258
++ ++EE +Q+ K VG+ ++ DLQ IG V G+ L ++L++ +K
Sbjct: 290 MDKLKEEAVDIQREIKTVGDSMSTKMQDLQSTANDIGSVAGKSLENQMQLLDGQSK 345
>05_07_0206 - 28405109-28406671
Length = 520
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 231 INFGSGQRCLSSGFNKLHSDHEALSPDIANHWVLLLKIHQLP 356
I FGSG +C S+ + L S + A + N W+ +IH+ P
Sbjct: 472 IAFGSGFKCNSAVWRALRSVNPAKENNFTNPWI--DEIHRFP 511
>04_04_1349 - 32811733-32813040
Length = 435
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 297 ALSPDIANHWVLLL--KIHQLPDEVFADYLTVLLQSFFFNNLQYSFSNSRSHRVSTESVK 470
A SP + + W L L + H LPD + D + +FF L +S + S S+ S+
Sbjct: 98 APSPPLPSSWFLRLLSESHSLPDSAWRDAFRMSRPAFF--QLLHSLALSDPAAASSSSLA 155
Query: 471 VGSLRVIGCYLF 506
+ +G LF
Sbjct: 156 LPPDHKLGAALF 167
>01_05_0346 +
21191542-21191783,21191988-21192072,21192159-21192422,
21192518-21192820,21193695-21193799,21193916-21194020,
21194613-21194712,21195614-21195933,21196183-21196359,
21196432-21196560,21196592-21196636,21196851-21197078
Length = 700
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +1
Query: 238 LEVVSGVLVPGSTSSTPIMRPCPLTSPITGCCF*RSINC 354
+E + + +P S +P P P + CC R+I+C
Sbjct: 1 MEAAASLPLPASRFLSPPPHPTPAAAAAAACCSRRNISC 39
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,398,640
Number of Sequences: 37544
Number of extensions: 460941
Number of successful extensions: 1424
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1933531792
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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