Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14k06
(677 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ989009-1|ABK88279.1| 81|Homo sapiens H+-ATPase e2 subunit pr... 82 2e-15
BX640846-1|CAE45916.1| 111|Homo sapiens hypothetical protein pr... 82 2e-15
AK098362-1|BAC05292.1| 217|Homo sapiens protein ( Homo sapiens ... 79 1e-14
Y15286-1|CAA75571.1| 81|Homo sapiens vacuolar proton-ATPase su... 78 3e-14
CR542131-1|CAG46928.1| 81|Homo sapiens ATP6V0E protein. 78 3e-14
CR456856-1|CAG33137.1| 81|Homo sapiens ATP6V0E protein. 78 3e-14
BC119715-1|AAI19716.1| 81|Homo sapiens ATPase, H+ transporting... 78 3e-14
BC119714-1|AAI19715.1| 81|Homo sapiens ATPase, H+ transporting... 78 3e-14
DQ995344-1|ABK76305.1| 61|Homo sapiens V-ATPase e2 subunit spl... 43 0.001
>DQ989009-1|ABK88279.1| 81|Homo sapiens H+-ATPase e2 subunit
protein.
Length = 81
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VGI P F PKGPNRG+I +L+ TA C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGIAGPWFVPKGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNETIWYVRFL 79
Query: 497 W 495
W
Sbjct: 80 W 80
>BX640846-1|CAE45916.1| 111|Homo sapiens hypothetical protein
protein.
Length = 111
Score = 81.8 bits (193), Expect = 2e-15
Identities = 34/61 (55%), Positives = 44/61 (72%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VGI P F PKGPNRG+I +L+ TA C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 50 VGIAGPWFVPKGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNETIWYVRFL 109
Query: 497 W 495
W
Sbjct: 110 W 110
>AK098362-1|BAC05292.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ25496 fis, clone CBR01585. ).
Length = 217
Score = 79.4 bits (187), Expect = 1e-14
Identities = 35/56 (62%), Positives = 42/56 (75%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIW 510
VGI P F PKGPNRG+I +L+ TA C+LFWL A +AQ+NPL GP+L NET IW
Sbjct: 50 VGIAGPWFVPKGPNRGVIITMLVATAVCCYLFWLIAILAQLNPLFGPQLKNET-IW 104
>Y15286-1|CAA75571.1| 81|Homo sapiens vacuolar proton-ATPase
subunit M9.2 protein.
Length = 81
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VG + P F PKGPNRG+I +L+ + C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYH 79
Query: 497 W 495
W
Sbjct: 80 W 80
>CR542131-1|CAG46928.1| 81|Homo sapiens ATP6V0E protein.
Length = 81
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VG + P F PKGPNRG+I +L+ + C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYH 79
Query: 497 W 495
W
Sbjct: 80 W 80
>CR456856-1|CAG33137.1| 81|Homo sapiens ATP6V0E protein.
Length = 81
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VG + P F PKGPNRG+I +L+ + C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYH 79
Query: 497 W 495
W
Sbjct: 80 W 80
>BC119715-1|AAI19716.1| 81|Homo sapiens ATPase, H+ transporting,
lysosomal 9kDa, V0 subunit e1 protein.
Length = 81
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VG + P F PKGPNRG+I +L+ + C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYH 79
Query: 497 W 495
W
Sbjct: 80 W 80
>BC119714-1|AAI19715.1| 81|Homo sapiens ATPase, H+ transporting,
lysosomal 9kDa, V0 subunit e1 protein.
Length = 81
Score = 78.2 bits (184), Expect = 3e-14
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 498
VG + P F PKGPNRG+I +L+ + C+LFWL A +AQ+NPL GP+L NET+ ++
Sbjct: 20 VGFLVPWFIPKGPNRGVIITMLVTCSVCCYLFWLIAILAQLNPLFGPQLKNETIWYLKYH 79
Query: 497 W 495
W
Sbjct: 80 W 80
>DQ995344-1|ABK76305.1| 61|Homo sapiens V-ATPase e2 subunit splice
variant protein.
Length = 61
Score = 42.7 bits (96), Expect = 0.001
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -1
Query: 677 VGIICPIFAPKGPNRGIIQVVLILTAATCWL 585
VGI P F PKGPNRG+I +L+ TA C+L
Sbjct: 20 VGIAGPWFVPKGPNRGVIITMLVATAVCCYL 50
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,664,407
Number of Sequences: 237096
Number of extensions: 1805847
Number of successful extensions: 2716
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2715
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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