Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14k05
(496 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.58
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 1.0
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 24 1.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 1.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 1.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 1.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 1.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.4
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.4
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 3.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 4.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 4.1
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 21 5.4
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.2
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 7.2
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 7.2
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 7.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.5
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.5
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 0.58
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = -3
Query: 236 YKSHIYSYNSTRNTLYFNTIYSNYXNHQK--YYSTWNV 129
+ ++ Y YN N N +NY N+ K YY+ N+
Sbjct: 324 HNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINI 361
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -3
Query: 206 TRNTLYFNTIYSNYXNHQKYYS 141
+ T++ N Y+NY N + YY+
Sbjct: 308 SNKTIHNNNNYNNYNNKKLYYN 329
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.8 bits (49), Expect = 1.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -3
Query: 218 SYNSTRNTLYFNTIYSNYXNHQKYYSTWNVSST 120
+Y+S NTL + + SN + K+ + N SST
Sbjct: 300 AYSSLENTLKYYEVGSNVPFNFKFITDANSSST 332
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIYSNYXNHQKYY 144
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 1.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIYSNYXNHQKYY 144
N KY S+ +YN+ N Y N +NY K Y
Sbjct: 88 NYKY-SNYNNYNNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYSTWN 132
++L N YSNY N+ Y+ +N
Sbjct: 83 SSLSNNYNYSNYNNYNNNYNNYN 105
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 1.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYSTWN 132
++L N YSNY N+ Y+ +N
Sbjct: 316 SSLSNNYKYSNYNNYNNNYNNYN 338
Score = 20.6 bits (41), Expect = 9.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -3
Query: 206 TRNTLYFNTIYSNYXNHQKYYSTWN 132
+ N Y N Y+NY N+ Y+ +N
Sbjct: 319 SNNYKYSN--YNNYNNNYNNYNNYN 341
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYSTWNV 129
++L NTI++N N + YY+ N+
Sbjct: 316 SSLSNNTIHNNNYNKKLYYNIINI 339
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 2.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 230 SHIYSYNSTRN-TLYFNTIYSNYXNHQKYYSTWNVS 126
S+ Y Y++ N Y N Y+NY N + YY + ++
Sbjct: 319 SNNYKYSNYNNYNNYNNNNYNNY-NKKLYYKNYIIN 353
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 3.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 224 IYSYNSTRNTLYFNTIYSNYXNH 156
I + NS N +N Y+NY N+
Sbjct: 82 ISNNNSLSNNYNYNNNYNNYNNN 104
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 4.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 200 NTLYFNTIYSNYXNHQKYYST 138
++L N YSNY N+ Y+T
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNT 103
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 21.4 bits (43), Expect = 5.4
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3
Query: 218 SYNSTRNTLYFNTIYSNY 165
S+ T N YF+ Y NY
Sbjct: 209 SWRITHNFFYFDPRYGNY 226
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIY 174
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 176 YSNYXNHQKYYSTWNVSS 123
Y N +++KY TW S
Sbjct: 50 YKNENSYRKYRETWKERS 67
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIY 174
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 176 YSNYXNHQKYYSTWNVSS 123
Y N +++KY TW S
Sbjct: 50 YKNENSYRKYRETWKERS 67
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIY 174
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 176 YSNYXNHQKYYSTWNVSS 123
Y N +++KY TW S
Sbjct: 50 YKNENSYRKYRETWKERS 67
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.0 bits (42), Expect = 7.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 245 N*KYKSHIYSYNSTRNTLYFNTIY 174
N KY + +YN+ LY+N Y
Sbjct: 95 NYKYNYNNNNYNNNCKKLYYNINY 118
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 176 YSNYXNHQKYYSTWNVSS 123
Y N +++KY TW S
Sbjct: 50 YKNENSYRKYRETWKERS 67
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 167 NYYKWY*NIGCSLWNYMNKYV 229
NY WY N +L N +N ++
Sbjct: 204 NYSGWYLNHDYNLENKLNYFI 224
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 221 YSYNSTRNTLYFNTIY 174
Y+YN+ LY+N Y
Sbjct: 98 YNYNNNCKKLYYNINY 113
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,665
Number of Sequences: 438
Number of extensions: 1612
Number of successful extensions: 29
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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