Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14j24
(635 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2... 194 3e-49
AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens ... 194 3e-49
AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRN... 194 3e-49
BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein. 144 3e-34
X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase pro... 142 7e-34
D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase pro... 142 7e-34
BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase p... 142 7e-34
AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase p... 142 7e-34
AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase v... 141 2e-33
BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase p... 139 7e-33
BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein. 137 3e-32
AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase p... 122 1e-27
AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric... 56 1e-07
Z69719-5|CAI95608.1| 855|Homo sapiens rhomboid 5 homolog 1 (Dro... 33 0.64
DQ431198-4|ABD95905.1| 862|Homo sapiens RHBDG1 protein. 33 0.64
BC014425-1|AAH14425.1| 855|Homo sapiens rhomboid 5 homolog 1 (D... 33 0.64
AE006462-4|AAK61212.1| 862|Homo sapiens unknown protein. 33 0.64
BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein. 33 1.1
BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2 (D... 33 1.1
AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5... 33 1.1
AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein. 33 1.1
AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens ... 33 1.1
AF115510-1|AAD41258.1| 603|Homo sapiens LRR FLI-I interacting p... 32 2.0
AK026010-1|BAB15318.1| 855|Homo sapiens protein ( Homo sapiens ... 31 2.6
Y16270-1|CAA76151.1| 387|Homo sapiens paralemin protein. 30 7.9
Y14770-1|CAB37400.1| 387|Homo sapiens paralemmin protein. 30 7.9
U61384-1|AAD12188.1| 227|Homo sapiens GAS41 protein protein. 30 7.9
D87460-1|BAA13400.1| 345|Homo sapiens KIAA0270 protein. 30 7.9
BC032449-1|AAH32449.1| 387|Homo sapiens paralemmin protein. 30 7.9
BC000994-1|AAH00994.1| 227|Homo sapiens YEATS domain containing... 30 7.9
AK001413-1|BAA91678.1| 227|Homo sapiens protein ( Homo sapiens ... 30 7.9
AJ245746-1|CAC01935.1| 223|Homo sapiens NuBI-1 protein protein. 30 7.9
>BC042912-1|AAH42912.1| 518|Homo sapiens seryl-tRNA synthetase 2,
mitochondrial protein.
Length = 518
Score = 194 bits (472), Expect = 3e-49
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Frame = -3
Query: 567 KLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS--EQSEEMLEVIRNTQEKIFT 394
++ S CYRAET+ E RG+YRVH F KVEMF VT EQS ++LE + Q +I T
Sbjct: 321 RMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILT 380
Query: 393 PLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITYKTL 214
LG+ RVLDMP ELG AYRK+D+EAWMPGR +GE++S SNCTD+QSRRL+I ++T
Sbjct: 381 ELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTE 440
Query: 213 NDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFMNGKKFIMKNTKVP 40
E F HT+N TACA+PR+LIAL+E++Q G +++P +Q ++ G I T VP
Sbjct: 441 AGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL-GTDRITAPTHVP 497
>AK000457-1|BAA91176.1| 518|Homo sapiens protein ( Homo sapiens
cDNA FLJ20450 fis, clone KAT05607. ).
Length = 518
Score = 194 bits (472), Expect = 3e-49
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Frame = -3
Query: 567 KLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS--EQSEEMLEVIRNTQEKIFT 394
++ S CYRAET+ E RG+YRVH F KVEMF VT EQS ++LE + Q +I T
Sbjct: 321 RMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILT 380
Query: 393 PLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITYKTL 214
LG+ RVLDMP ELG AYRK+D+EAWMPGR +GE++S SNCTD+QSRRL+I ++T
Sbjct: 381 ELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTE 440
Query: 213 NDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFMNGKKFIMKNTKVP 40
E F HT+N TACA+PR+LIAL+E++Q G +++P +Q ++ G I T VP
Sbjct: 441 AGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL-GTDRITAPTHVP 497
>AB029948-1|BAA99557.1| 518|Homo sapiens mitochondrial seryl-tRNA
synthetase protein.
Length = 518
Score = 194 bits (472), Expect = 3e-49
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 2/178 (1%)
Frame = -3
Query: 567 KLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS--EQSEEMLEVIRNTQEKIFT 394
++ S CYRAET+ E RG+YRVH F KVEMF VT EQS ++LE + Q +I T
Sbjct: 321 RMVCSSTCYRAETNTGQEPRGLYRVHHFTKVEMFGVTGPGLEQSSQLLEEFLSLQMEILT 380
Query: 393 PLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITYKTL 214
LG+ RVLDMP ELG AYRK+D+EAWMPGR +GE++S SNCTD+QSRRL+I ++T
Sbjct: 381 ELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIMFQTE 440
Query: 213 NDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFMNGKKFIMKNTKVP 40
E F HT+N TACA+PR+LIAL+E++Q G +++P +Q ++ G I T VP
Sbjct: 441 AGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL-GTDRITAPTHVP 497
>BC001020-1|AAH01020.2| 142|Homo sapiens SARS2 protein protein.
Length = 142
Score = 144 bits (348), Expect = 3e-34
Identities = 65/122 (53%), Positives = 88/122 (72%)
Frame = -3
Query: 405 KIFTPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNIT 226
+I T LG+ RVLDMP ELG AYRK+D+EAWMPGR +GE++S SNCTD+QSRRL+I
Sbjct: 1 EILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGRFGEVTSASNCTDFQSRRLHIM 60
Query: 225 YKTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFMNGKKFIMKNTK 46
++T E F HT+N TACA+PR+LIAL+E++Q G +++P +Q ++ G I T
Sbjct: 61 FQTEAGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPALQSYL-GTDRITAPTH 119
Query: 45 VP 40
VP
Sbjct: 120 VP 121
>X91257-1|CAA62635.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 142 bits (345), Expect = 7e-34
Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460
>D49914-1|BAA95602.1| 514|Homo sapiens Seryl tRNA Synthetase
protein.
Length = 514
Score = 142 bits (345), Expect = 7e-34
Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460
>BC000716-1|AAH00716.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 142 bits (345), Expect = 7e-34
Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460
>AL356389-4|CAI13599.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 142 bits (345), Expect = 7e-34
Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460
>AK222677-1|BAD96397.1| 514|Homo sapiens seryl-tRNA synthetase
variant protein.
Length = 514
Score = 141 bits (341), Expect = 2e-33
Identities = 74/169 (43%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+++
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEELY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSSSHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPEKLKEFM 460
>BC009390-1|AAH09390.1| 514|Homo sapiens seryl-tRNA synthetase
protein.
Length = 514
Score = 139 bits (337), Expect = 7e-33
Identities = 74/169 (43%), Positives = 105/169 (62%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA + A++E +Q KG I +PE +++FM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTCTICAILENYQTEKG-ITVPEKLKEFM 460
>BC111398-1|AAI11399.1| 511|Homo sapiens SARS protein protein.
Length = 511
Score = 137 bits (332), Expect = 3e-32
Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 6/169 (3%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 -KTLNDEYCFVHTLNGTACAIPRMLIALIETHQHPKGKIIIPETIQKFM 79
K + D+ FVH LN T CA R + A++E +Q KG I +PE KFM
Sbjct: 413 TKKMMDKVEFVHMLNATMCATTRTICAILENYQTEKG-ITVPE---KFM 457
>AL356389-5|CAI13600.1| 536|Homo sapiens seryl-tRNA synthetase
protein.
Length = 536
Score = 122 bits (293), Expect = 1e-27
Identities = 75/191 (39%), Positives = 106/191 (55%), Gaps = 28/191 (14%)
Frame = -3
Query: 567 KLAAVSRCYRAET-SNLAEERGIYRVHQFNKVEMFVVTT--SEQSEEMLEVIRNTQEKIF 397
K A +S C+R E S+ + RGI+RVHQF K+E FV ++ +S EM E + T E+ +
Sbjct: 293 KYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAEEFY 352
Query: 396 TPLGISVRVLDMPPYELGAAAYRKYDMEAWMPGRQAYGEISSCSNCTDYQSRRLNITY-- 223
LGI ++++ L AA +K D+EAW PG A+ E+ SCSNCTDYQ+RRL I Y
Sbjct: 353 QSLGIPYHIVNIVSGSLNHAASKKLDLEAWFPGSGAFRELVSCSNCTDYQARRLRIRYGQ 412
Query: 222 ------KTLNDEYC-----------------FVHTLNGTACAIPRMLIALIETHQHPKGK 112
K N+ + FVH LN T CA R + A++E +Q KG
Sbjct: 413 TKKMMDKRKNNLHLSTQNKLEASLFSPKKVEFVHMLNATMCATTRTICAILENYQTEKG- 471
Query: 111 IIIPETIQKFM 79
I +PE +++FM
Sbjct: 472 ITVPEKLKEFM 482
>AF264627-1|AAG03019.1| 84|Homo sapiens uncharacterized gastric
protein YC12P protein.
Length = 84
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/72 (34%), Positives = 44/72 (61%)
Frame = -3
Query: 306 MPGRQAYGEISSCSNCTDYQSRRLNITYKTLNDEYCFVHTLNGTACAIPRMLIALIETHQ 127
+P Y E+SS S C D+Q++R+ + YK + + + +T+NG+ AI R++ ++E +Q
Sbjct: 1 LPSENRYREVSSISICGDFQAQRMKLRYKE-DGKTLYANTINGSGLAIDRIIAIILEQYQ 59
Query: 126 HPKGKIIIPETI 91
G I IPE +
Sbjct: 60 TESGYIEIPEVL 71
>Z69719-5|CAI95608.1| 855|Homo sapiens rhomboid 5 homolog 1
(Drosophila) protein.
Length = 855
Score = 33.5 bits (73), Expect = 0.64
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTSEQS 442
WL ++ ++ TIL +C+ +A V ++ RG+Y ++ + E F + S ++
Sbjct: 409 WLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEA 467
>DQ431198-4|ABD95905.1| 862|Homo sapiens RHBDG1 protein.
Length = 862
Score = 33.5 bits (73), Expect = 0.64
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTSEQS 442
WL ++ ++ TIL +C+ +A V ++ RG+Y ++ + E F + S ++
Sbjct: 409 WLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEA 467
>BC014425-1|AAH14425.1| 855|Homo sapiens rhomboid 5 homolog 1
(Drosophila) protein.
Length = 855
Score = 33.5 bits (73), Expect = 0.64
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTSEQS 442
WL ++ ++ TIL +C+ +A V ++ RG+Y ++ + E F + S ++
Sbjct: 409 WLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEA 467
>AE006462-4|AAK61212.1| 862|Homo sapiens unknown protein.
Length = 862
Score = 33.5 bits (73), Expect = 0.64
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTSEQS 442
WL ++ ++ TIL +C+ +A V ++ RG+Y ++ + E F + S ++
Sbjct: 409 WLTFVHSLVTILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEA 467
>BC035829-1|AAH35829.1| 649|Homo sapiens RHBDF2 protein protein.
Length = 649
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
WL ++ + T+L+IC +A V T + +G+Y ++ + E F V S
Sbjct: 200 WLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPS 255
>BC016034-1|AAH16034.2| 856|Homo sapiens rhomboid 5 homolog 2
(Drosophila) protein.
Length = 856
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
WL ++ + T+L+IC +A V T + +G+Y ++ + E F V S
Sbjct: 407 WLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPS 462
>AY500247-1|AAS77567.1| 827|Homo sapiens rhomboid veinlet-like 5
protein.
Length = 827
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
WL ++ + T+L+IC +A V T + +G+Y ++ + E F V S
Sbjct: 378 WLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPS 433
>AK074034-1|BAB84860.1| 716|Homo sapiens FLJ00080 protein protein.
Length = 716
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
WL ++ + T+L+IC +A V T + +G+Y ++ + E F V S
Sbjct: 353 WLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPS 408
>AK025994-1|BAB15310.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22341 fis, clone HRC06032. ).
Length = 619
Score = 32.7 bits (71), Expect = 1.1
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
WL ++ + T+L+IC +A V T + +G+Y ++ + E F V S
Sbjct: 170 WLTFVHVIITLLVICTYGIAPVGFAQHVTTQLVLRNKGVYESVKYIQQENFWVGPS 225
>AF115510-1|AAD41258.1| 603|Homo sapiens LRR FLI-I interacting
protein 1 protein.
Length = 603
Score = 31.9 bits (69), Expect = 2.0
Identities = 22/76 (28%), Positives = 36/76 (47%)
Frame = -3
Query: 630 QKCLWLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTS 451
+K ++ + T+ +L+ +LA R Y + E+ + + QF E V
Sbjct: 289 EKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAE--VKEAL 346
Query: 450 EQSEEMLEVIRNTQEK 403
+Q EEMLE IR Q+K
Sbjct: 347 KQREEMLEEIRQLQQK 362
>AK026010-1|BAB15318.1| 855|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22357 fis, clone HRC06404. ).
Length = 855
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = -3
Query: 618 WLDYLQTVYTILMICLXKLAAVSRCYRAETSNLAEERGIYRVHQFNKVEMFVVTTSEQS 442
WL ++ ++ IL +C+ +A V ++ RG+Y ++ + E F + S ++
Sbjct: 409 WLTFVHSLVAILAVCIYGIAPVGFSQHETVDSVLRNRGVYENVKYVQQENFWIGPSSEA 467
>Y16270-1|CAA76151.1| 387|Homo sapiens paralemin protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -3
Query: 447 QSEEMLEVIRNTQEKIFTPLGI--SVRVLDMPPYELGAAAYRK---YDMEAWMPGRQAYG 283
+ E EV+ N+Q+ TP+G RV + P + + K Y +E + + G
Sbjct: 127 KEERKTEVVMNSQQ---TPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTG 183
Query: 282 EISSCSNCTDYQSRRLNITYKTLNDEYCFVHTLNGTA 172
E S+ T + L + K DE VH ++GTA
Sbjct: 184 ETRVLSSTTLLPRQPLPLGIKVYEDETKVVHAVDGTA 220
>Y14770-1|CAB37400.1| 387|Homo sapiens paralemmin protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -3
Query: 447 QSEEMLEVIRNTQEKIFTPLGI--SVRVLDMPPYELGAAAYRK---YDMEAWMPGRQAYG 283
+ E EV+ N+Q+ TP+G RV + P + + K Y +E + + G
Sbjct: 127 KEERKTEVVMNSQQ---TPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTG 183
Query: 282 EISSCSNCTDYQSRRLNITYKTLNDEYCFVHTLNGTA 172
E S+ T + L + K DE VH ++GTA
Sbjct: 184 ETRVLSSTTLLPRQPLPLGIKVYEDETKVVHAVDGTA 220
>U61384-1|AAD12188.1| 227|Homo sapiens GAS41 protein protein.
Length = 227
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = -3
Query: 525 NLAEERGIYRVHQFNKVEMFVVTTSEQSEEMLEVIRNTQEKIFTPLGISVRVLDMPPYEL 346
N+A G R + + V ++E+M ++ Q K+ G +RV+ PPYE+
Sbjct: 29 NVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEI 88
Query: 345 GAAAYRKYDM 316
+ ++++
Sbjct: 89 TETGWGEFEI 98
>D87460-1|BAA13400.1| 345|Homo sapiens KIAA0270 protein.
Length = 345
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -3
Query: 447 QSEEMLEVIRNTQEKIFTPLGI--SVRVLDMPPYELGAAAYRK---YDMEAWMPGRQAYG 283
+ E EV+ N+Q+ TP+G RV + P + + K Y +E + + G
Sbjct: 85 KEERKTEVVMNSQQ---TPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTG 141
Query: 282 EISSCSNCTDYQSRRLNITYKTLNDEYCFVHTLNGTA 172
E S+ T + L + K DE VH ++GTA
Sbjct: 142 ETRVLSSTTLLPRQPLPLGIKVYEDETKVVHAVDGTA 178
>BC032449-1|AAH32449.1| 387|Homo sapiens paralemmin protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.9
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 5/97 (5%)
Frame = -3
Query: 447 QSEEMLEVIRNTQEKIFTPLGI--SVRVLDMPPYELGAAAYRK---YDMEAWMPGRQAYG 283
+ E EV+ N+Q+ TP+G RV + P + + K Y +E + + G
Sbjct: 127 KEERKTEVVMNSQQ---TPVGTPKDKRVSNTPLRTVDGSPMMKAAMYSVEITVEKDKVTG 183
Query: 282 EISSCSNCTDYQSRRLNITYKTLNDEYCFVHTLNGTA 172
E S+ T + L + K DE VH ++GTA
Sbjct: 184 ETRVLSSTTLLPRQPLPLGIKVYEDETKVVHAVDGTA 220
>BC000994-1|AAH00994.1| 227|Homo sapiens YEATS domain containing 4
protein.
Length = 227
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = -3
Query: 525 NLAEERGIYRVHQFNKVEMFVVTTSEQSEEMLEVIRNTQEKIFTPLGISVRVLDMPPYEL 346
N+A G R + + V ++E+M ++ Q K+ G +RV+ PPYE+
Sbjct: 29 NVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEI 88
Query: 345 GAAAYRKYDM 316
+ ++++
Sbjct: 89 TETGWGEFEI 98
>AK001413-1|BAA91678.1| 227|Homo sapiens protein ( Homo sapiens
cDNA FLJ10551 fis, clone NT2RP2002270. ).
Length = 227
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = -3
Query: 525 NLAEERGIYRVHQFNKVEMFVVTTSEQSEEMLEVIRNTQEKIFTPLGISVRVLDMPPYEL 346
N+A G R + + V ++E+M ++ Q K+ G +RV+ PPYE+
Sbjct: 29 NVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEI 88
Query: 345 GAAAYRKYDM 316
+ ++++
Sbjct: 89 TETGWGEFEI 98
>AJ245746-1|CAC01935.1| 223|Homo sapiens NuBI-1 protein protein.
Length = 223
Score = 29.9 bits (64), Expect = 7.9
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = -3
Query: 525 NLAEERGIYRVHQFNKVEMFVVTTSEQSEEMLEVIRNTQEKIFTPLGISVRVLDMPPYEL 346
N+A G R + + V ++E+M ++ Q K+ G +RV+ PPYE+
Sbjct: 25 NVARYFGKKREEDGHTHQWTVYVKPYRNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEI 84
Query: 345 GAAAYRKYDM 316
+ ++++
Sbjct: 85 TETGWGEFEI 94
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,862,162
Number of Sequences: 237096
Number of extensions: 1977992
Number of successful extensions: 6764
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6745
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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