Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14i08
(695 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene ... 86 1e-16
D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c pr... 86 1e-16
BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein. 86 1e-16
U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthas... 82 2e-15
CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein. 82 2e-15
BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+ transp... 82 2e-15
AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein. 82 2e-15
X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of ... 81 3e-15
M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein. 81 3e-15
D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c pr... 81 3e-15
CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein. 81 3e-15
BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+ transp... 81 3e-15
BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+ transp... 81 3e-15
M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein. 62 1e-09
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 34 0.56
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ... 34 0.56
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein. 34 0.56
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 32 2.2
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 32 2.2
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 32 2.2
>X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene for
mitochondrial ATP synthase c subunit (P2 form). ).
Length = 141
Score = 85.8 bits (203), Expect = 1e-16
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = -2
Query: 694 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 515
T L + RSFQT+++++DID+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 514 QLFSYAILGFALSE 473
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 141
Score = 85.8 bits (203), Expect = 1e-16
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = -2
Query: 694 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 515
T L + RSFQT+++++DID+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 514 QLFSYAILGFALSE 473
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein.
Length = 141
Score = 85.8 bits (203), Expect = 1e-16
Identities = 45/74 (60%), Positives = 52/74 (70%)
Frame = -2
Query: 694 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQ 515
T L + RSFQT+++++DID+AAKF VFGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 514 QLFSYAILGFALSE 473
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthase
subunit 9 precursor protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -2
Query: 676 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 497
R FQT+++++DID+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 473
ILGFALSE
Sbjct: 118 ILGFALSE 125
>CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -2
Query: 676 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 497
R FQT+++++DID+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 473
ILGFALSE
Sbjct: 118 ILGFALSE 125
>BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C3
(subunit 9) protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -2
Query: 676 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 497
R FQT+++++DID+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 473
ILGFALSE
Sbjct: 118 ILGFALSE 125
>AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = -2
Query: 676 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFSYA 497
R FQT+++++DID+AAKF VFGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 473
ILGFALSE
Sbjct: 118 ILGFALSE 125
>X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of
human mitochondrial ATP protein.
Length = 136
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 50 ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 109
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 110 YAILGFALSE 119
>M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein.
Length = 100
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 14 ARRGFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 73
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 74 YAILGFALSE 83
>D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 136
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 50 ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 109
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 110 YAILGFALSE 119
>CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein.
Length = 136
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 50 ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 109
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 110 YAILGFALSE 119
>BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit c
(subunit 9), protein.
Length = 136
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 50 ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 109
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 110 YAILGFALSE 119
>BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C1
(subunit 9) protein.
Length = 136
Score = 81.4 bits (192), Expect = 3e-15
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -2
Query: 682 AVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXVFGSLIIGYARNPSLKQQLFS 503
A R FQT+ V++DID+AAKF VFGSLIIGYARNPSLKQQLFS
Sbjct: 50 ARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFS 109
Query: 502 YAILGFALSE 473
YAILGFALSE
Sbjct: 110 YAILGFALSE 119
>M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein.
Length = 58
Score = 62.5 bits (145), Expect = 1e-09
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = -2
Query: 562 FGSLIIGYARNPSLKQQLFSYAILGFALSE 473
FGSLIIGYARNPSLKQQLFSYAI+GFALSE
Sbjct: 12 FGSLIIGYARNPSLKQQLFSYAIVGFALSE 41
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 33.9 bits (74), Expect = 0.56
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 533 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 673
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2556 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2604
>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
protein.
Length = 3312
Score = 33.9 bits (74), Expect = 0.56
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 533 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 673
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2486 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2534
>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
Length = 1364
Score = 33.9 bits (74), Expect = 0.56
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 533 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 673
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 538 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 586
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +2
Query: 521 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 694
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +2
Query: 521 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 694
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 31.9 bits (69), Expect = 2.2
Identities = 20/58 (34%), Positives = 24/58 (41%)
Frame = +2
Query: 521 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELC 694
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELC 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,601,842
Number of Sequences: 237096
Number of extensions: 1957670
Number of successful extensions: 5070
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5053
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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