Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14i06
         (677 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000591-1|AAH00591.1|  560|Homo sapiens apoptosis antagonizing ...   157   4e-38
AJ249940-1|CAB57451.2|  560|Homo sapiens Ded protein protein.         157   4e-38
AF083208-1|AAD52016.1|  558|Homo sapiens Che-1 protein.               119   1e-26
X06774-1|CAA29941.1|  340|Homo sapiens protein ( Human mRNA for ...    30   8.7  

>BC000591-1|AAH00591.1|  560|Homo sapiens apoptosis antagonizing
           transcription factor protein.
          Length = 560

 Score =  157 bits (380), Expect = 4e-38
 Identities = 92/221 (41%), Positives = 140/221 (63%), Gaps = 17/221 (7%)
 Frame = -3

Query: 657 LPKKRKLD--DYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKN--APTNTVLQQI 490
           +P KRKL+  DY   ++     F  +R+ ++QKW++KT+LA+    K   A   ++L QI
Sbjct: 337 VPAKRKLEMEDYPSFMAKRFADFTVYRNRTLQKWHDKTKLASGKLGKGFGAFERSILTQI 396

Query: 489 SYILSDRDKLIRRTQLKRTEYDIVGY----SKAVNNDNDSEK-------VTKNRKDDDEY 343
            +IL D+++L+RRTQ KR+ Y ++G     ++ V      E           + KD DE 
Sbjct: 397 DHILMDKERLLRRTQTKRSVYRVLGKPEPAAQPVPESLPGEPEILPQAPANAHLKDLDE- 455

Query: 342 IPEIFDDNDFYHQLLRELIECK--SADISDPVQLSRQWIALQQMRSKMKRKVDTKATKGR 169
             EIFDD+DFYHQLLRELIE K  S D +D V + RQW+A+Q++RSK+ +KVD KA+KGR
Sbjct: 456 --EIFDDDDFYHQLLRELIERKTSSLDPNDQVAMGRQWLAIQKLRSKIHKKVDRKASKGR 513

Query: 168 KIKYVVHNQLVNYMAPEKCLTWTEESTNELYNSLFGKMFEP 46
           K+++ V ++L+++MAP    T  +++  ELY SLFG++  P
Sbjct: 514 KLRFHVLSKLLSFMAPIDHTTMNDDARTELYRSLFGQLHPP 554


>AJ249940-1|CAB57451.2|  560|Homo sapiens Ded protein protein.
          Length = 560

 Score =  157 bits (380), Expect = 4e-38
 Identities = 92/221 (41%), Positives = 140/221 (63%), Gaps = 17/221 (7%)
 Frame = -3

Query: 657 LPKKRKLD--DYEKEISISHKAFKPFRDASIQKWNEKTRLATASNIKN--APTNTVLQQI 490
           +P KRKL+  DY   ++     F  +R+ ++QKW++KT+LA+    K   A   ++L QI
Sbjct: 337 VPAKRKLEMEDYPSFMAKRFADFTVYRNRTLQKWHDKTKLASGKLGKGFGAFERSILTQI 396

Query: 489 SYILSDRDKLIRRTQLKRTEYDIVGY----SKAVNNDNDSEK-------VTKNRKDDDEY 343
            +IL D+++L+RRTQ KR+ Y ++G     ++ V      E           + KD DE 
Sbjct: 397 DHILMDKERLLRRTQTKRSVYRVLGKPEPAAQPVPESLPGEPEILPQAPANAHLKDLDE- 455

Query: 342 IPEIFDDNDFYHQLLRELIECK--SADISDPVQLSRQWIALQQMRSKMKRKVDTKATKGR 169
             EIFDD+DFYHQLLRELIE K  S D +D V + RQW+A+Q++RSK+ +KVD KA+KGR
Sbjct: 456 --EIFDDDDFYHQLLRELIERKTSSLDPNDQVAMGRQWLAIQKLRSKIHKKVDRKASKGR 513

Query: 168 KIKYVVHNQLVNYMAPEKCLTWTEESTNELYNSLFGKMFEP 46
           K+++ V ++L+++MAP    T  +++  ELY SLFG++  P
Sbjct: 514 KLRFHVLSKLLSFMAPIDHTTMNDDARTELYRSLFGQLHPP 554


>AF083208-1|AAD52016.1|  558|Homo sapiens Che-1 protein.
          Length = 558

 Score =  119 bits (286), Expect = 1e-26
 Identities = 82/222 (36%), Positives = 129/222 (58%), Gaps = 18/222 (8%)
 Frame = -3

Query: 657 LPKKRKLDDYEKEISISHKAFKPFRDA--SIQKWNEKTRLATASNIKN--APTNTVLQQI 490
           +P KRKL+  E   S   KA    +    ++QKW++KT+LA+    K   A   ++L QI
Sbjct: 335 VPAKRKLE-MEDYPSFMAKALPTLQSTGTTLQKWHDKTKLASGKLGKGFGAFERSILTQI 393

Query: 489 SYILSDRDKLIRRTQLKRTEYDIVGY----SKAVNNDNDSEK-------VTKNRKDDDEY 343
            +IL  +++L+RRTQ KR+ Y ++G     ++ V      E           + KD DE 
Sbjct: 394 DHILMCKERLLRRTQTKRSVYRVLGKPEPAAQPVPESLPGEPEILPQAPANAHLKDLDE- 452

Query: 342 IPEIFDDNDFYHQLLRELIECKSADISDPVQLSR-QWIAL--QQMRSKMKRKVDTKATKG 172
             EIFDD+DFYHQLLRELIE K++ +    Q++  + +A   +   +K  +KVD KA+KG
Sbjct: 453 --EIFDDDDFYHQLLRELIERKTSSLDPNDQVAHGKAVACNPEVTEAKSTKKVDRKASKG 510

Query: 171 RKIKYVVHNQLVNYMAPEKCLTWTEESTNELYNSLFGKMFEP 46
           RK+++ V ++L+++MAP    T  +++  ELY SLFG++  P
Sbjct: 511 RKLRFHVLSKLLSFMAPIDHTTMNDDARTELYRSLFGQLHPP 552


>X06774-1|CAA29941.1|  340|Homo sapiens protein ( Human mRNA for
           T-cell rearranging gamma gene (TRG) V(g)8-J(g)2-  C(g)2.
            ).
          Length = 340

 Score = 29.9 bits (64), Expect = 8.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -3

Query: 204 KRKVDTKATKGRKIKYVVHNQLVNYMAPEKCLTWTEESTNELYNSLFG 61
           + K  T A+ G+ +K+++ N +        C TWT+      Y  LFG
Sbjct: 83  REKYHTYASTGKSLKFILENLIERDSGVYYCATWTDRI---YYKKLFG 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,650,725
Number of Sequences: 237096
Number of extensions: 1671809
Number of successful extensions: 3910
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3901
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7671262118
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)