Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14i01
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 25 0.66
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.6
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 6.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 6.1
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 8.1
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 8.1
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.1
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 25.0 bits (52), Expect = 0.66
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +1
Query: 343 QAPCWCGGATRRTNRQDVSSGLSRWWRCPEV 435
Q W G N D + G R+WR P V
Sbjct: 258 QTKGWDGSNMVEGNESDHNDGRLRYWRTPSV 288
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1
Query: 637 RSVSDNDIRKYEMF 596
+S +D+DI KY+MF
Sbjct: 190 KSCTDSDIEKYKMF 203
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMNLR 82
+YS Y++Y YN N +
Sbjct: 90 KYSNYNNYNNNYNTNYK 106
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMN 76
+YS Y++Y YN N
Sbjct: 90 KYSNYNNYNNNYNNN 104
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 6.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 32 RYSKYSSYPTTYNMN 76
+YS Y++Y YN N
Sbjct: 90 KYSNYNNYNNNYNNN 104
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 635 LRVRQRHPQVRDVRADPAAEPRLRNQ 558
++V Q+ + D DP++EP + +Q
Sbjct: 110 MQVPQQGASIDDSDPDPSSEPTVHSQ 135
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 635 LRVRQRHPQVRDVRADPAAEPRLRNQ 558
++V Q+ + D DP++EP + +Q
Sbjct: 558 MQVPQQGASIDDSDPDPSSEPTVHSQ 583
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 566 RNQLQIPNKRGSYRGHGYFS 507
R + P+K +YR HGY S
Sbjct: 603 RMRYAAPHKAFTYRMHGYAS 622
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,292
Number of Sequences: 438
Number of extensions: 3712
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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