Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14h16
         (695 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07548-1|AAA02852.1|  408|Homo sapiens aminoacylase-1 protein.        151   2e-36
D16307-1|BAA03814.1|  408|Homo sapiens 45kDa protein protein.         151   2e-36
D14524-1|BAA03397.1|  408|Homo sapiens aminoacylase-1 protein.        151   2e-36
BC014112-1|AAH14112.1|  408|Homo sapiens aminoacylase 1 protein.      151   2e-36
BC003023-1|AAH03023.1|  408|Homo sapiens aminoacylase 1 protein.      151   2e-36
BC000545-1|AAH00545.1|  408|Homo sapiens aminoacylase 1 protein.      151   2e-36
AF034833-1|AAB87696.1|   81|Homo sapiens integrin alpha 7A subun...    31   5.2  
AB065806-1|BAC06025.1|  311|Homo sapiens seven transmembrane hel...    30   6.9  

>L07548-1|AAA02852.1|  408|Homo sapiens aminoacylase-1 protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>D16307-1|BAA03814.1|  408|Homo sapiens 45kDa protein protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>D14524-1|BAA03397.1|  408|Homo sapiens aminoacylase-1 protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>BC014112-1|AAH14112.1|  408|Homo sapiens aminoacylase 1 protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>BC003023-1|AAH03023.1|  408|Homo sapiens aminoacylase 1 protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>BC000545-1|AAH00545.1|  408|Homo sapiens aminoacylase 1 protein.
          Length = 408

 Score =  151 bits (366), Expect = 2e-36
 Identities = 70/156 (44%), Positives = 105/156 (67%), Gaps = 2/156 (1%)
 Frame = -3

Query: 690 VTTINLTQVEGGVMVNVLPEVLSATFDVRIAPDVDLDEFGNMIEAWCKEAGEGVTFEYLV 511
           VT++NLT++EGGV  NV+P  +SA+FD R+APDVD   F   +++WC+ AGEGVT E+  
Sbjct: 248 VTSVNLTKLEGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLEFAQ 307

Query: 510 K--NPQVYSTKTDGSVPFWNSLVEVIEKMGLKLKCVTCPGATDARFVRLHNIPVINFTPI 337
           K  +PQV  T TD S P+W +   V + M L L+    P ATD R++R   +P + F+P+
Sbjct: 308 KWMHPQV--TPTDDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGFSPM 365

Query: 336 LNTPLYVHAHNERVHADMYKKGIDIMEKVLEALANV 229
             TP+ +H H+ER+H  ++ +G+DI  ++L ALA+V
Sbjct: 366 NRTPVLLHDHDERLHEAVFLRGVDIYTRLLPALASV 401


>AF034833-1|AAB87696.1|   81|Homo sapiens integrin alpha 7A subunit
           protein.
          Length = 81

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +2

Query: 482 VFVLYTCGFFTRYSKVTPSPASLHQASIIFPNSSRSTSGAILTSNVALSTSGKTLTITPP 661
           V +L+ CGFF R S+ +  P + H+A +    S+    G      V   +S    T  PP
Sbjct: 19  VLLLWKCGFFHRSSQSSSFPTNYHRACLAVQPSAMEVGG---PGTVGWDSSNGRSTPRPP 75


>AB065806-1|BAC06025.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 6.9
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 194 IESTVGLRVNA*TLASASKTFSMMSIPFLYMSA*TLSLCAWTYSGVFSIGV 346
           I ST+GL  +    A A   ++ +  P LY S  + +LC W   G +  G+
Sbjct: 104 IFSTMGLSESCLMTAMAYDRYAAICNPLLYSSIMSPTLCVWMVLGAYMTGL 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,550,380
Number of Sequences: 237096
Number of extensions: 2557724
Number of successful extensions: 5124
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5124
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)