Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14g02
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subuni... 87 5e-17
D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subuni... 87 5e-17
CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein. 87 5e-17
BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for IM... 87 5e-17
BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+ transp... 87 5e-17
D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subuni... 85 3e-16
D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subuni... 85 3e-16
AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+ transp... 85 3e-16
AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+ transp... 85 3e-16
Y00264-1|CAA68374.1| 695|Homo sapiens protein ( Human mRNA for ... 31 2.6
X13466-1|CAA31830.1| 695|Homo sapiens A4 amyloid protein precur... 31 2.6
X06989-1|CAA30050.1| 751|Homo sapiens amyloid A4 protein protein. 31 2.6
M34875-1|AAB59501.1| 547|Homo sapiens amyloid-beta protein prot... 31 2.6
M33112-1|AAB59502.1| 770|Homo sapiens amyloid-beta protein prot... 31 2.6
M28373-1|AAA58727.1| 484|Homo sapiens amyloid precursor protein... 31 2.6
D87675-1|BAA22264.1| 770|Homo sapiens amyloid precursor protein... 31 2.6
BC065529-1|AAH65529.1| 751|Homo sapiens amyloid beta (A4) precu... 31 2.6
BC065523-1|AAH65523.1| 352|Homo sapiens APP protein protein. 31 2.6
BC004369-1|AAH04369.1| 305|Homo sapiens APP protein protein. 31 2.6
AY919674-1|AAW82435.1| 770|Homo sapiens amyloid beta (A4) precu... 31 2.6
AF282245-1|AAQ14327.1| 639|Homo sapiens amyloid precursor prote... 31 2.6
>D16562-1|BAA03996.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>D16561-2|BAA03995.1| 298|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>CR457403-1|CAG33684.1| 298|Homo sapiens ATP5C1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC026049-1|AAH26049.1| 291|Homo sapiens Unknown (protein for
IMAGE:4908447) protein.
Length = 291
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 247 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 291
>BC020824-1|AAH20824.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC016812-1|AAH16812.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC013394-1|AAH13394.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC000931-1|AAH00931.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>BC000470-1|AAH00470.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>AL353754-3|CAH73453.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>AL158044-8|CAI12960.1| 298|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 298
Score = 87.0 bits (206), Expect = 5e-17
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAALD 449
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAALD
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAALD 298
>D16563-1|BAA03997.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 84.6 bits (200), Expect = 3e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 452
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>D16561-1|BAA03994.1| 297|Homo sapiens ATP synthase gamma-subunit
protein.
Length = 297
Score = 84.6 bits (200), Expect = 3e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 452
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>AL353754-4|CAH73454.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 84.6 bits (200), Expect = 3e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 452
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>AL158044-9|CAI12961.1| 297|Homo sapiens ATP synthase, H+
transporting, mitochondrial F1 complex, gamma
polypeptide 1 protein.
Length = 297
Score = 84.6 bits (200), Expect = 3e-16
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -2
Query: 583 MTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 452
MTAMDNASKNA EMIDKLTLTFNRTRQAVIT+ELIEIISGAAAL
Sbjct: 254 MTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>Y00264-1|CAA68374.1| 695|Homo sapiens protein ( Human mRNA for
amyloid A4 precursor of Alzheimer's disease. ).
Length = 695
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>X13466-1|CAA31830.1| 695|Homo sapiens A4 amyloid protein precursor
protein.
Length = 695
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>X06989-1|CAA30050.1| 751|Homo sapiens amyloid A4 protein protein.
Length = 751
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>M34875-1|AAB59501.1| 547|Homo sapiens amyloid-beta protein
protein.
Length = 547
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>M33112-1|AAB59502.1| 770|Homo sapiens amyloid-beta protein
protein.
Length = 770
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>M28373-1|AAA58727.1| 484|Homo sapiens amyloid precursor protein
protein.
Length = 484
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 2 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 40
>D87675-1|BAA22264.1| 770|Homo sapiens amyloid precursor protein
protein.
Length = 770
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>BC065529-1|AAH65529.1| 751|Homo sapiens amyloid beta (A4)
precursor protein (peptidase nexin-II, Alzheimer
disease) protein.
Length = 751
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>BC065523-1|AAH65523.1| 352|Homo sapiens APP protein protein.
Length = 352
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>BC004369-1|AAH04369.1| 305|Homo sapiens APP protein protein.
Length = 305
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>AY919674-1|AAW82435.1| 770|Homo sapiens amyloid beta (A4)
precursor protein (protease nexin-II, Alzheimer disease)
protein.
Length = 770
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 81 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 119
>AF282245-1|AAQ14327.1| 639|Homo sapiens amyloid precursor protein
639 protein.
Length = 639
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -3
Query: 228 QVTIKSDCSFTLVINNWCGYYLK*QGTTATHPHFHIYFRCLL 103
Q+T + + + I NWC K THPHF I +RCL+
Sbjct: 25 QITNVVEANQPVTIQNWCKRGRK---QCKTHPHFVIPYRCLV 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,364,805
Number of Sequences: 237096
Number of extensions: 1125374
Number of successful extensions: 1836
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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