Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14f23
         (729 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p pro...   215   7e-56
AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA ...   215   7e-56
Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin acti...   209   3e-54
BT016111-1|AAV36996.1| 1049|Drosophila melanogaster LD11955p pro...    30   2.8  
BT001657-1|AAN71412.1|  773|Drosophila melanogaster RE45289p pro...    30   2.8  
BT001586-1|AAN71341.1|  527|Drosophila melanogaster RE26413p pro...    30   2.8  
AY070958-1|AAL48580.1|  773|Drosophila melanogaster RE05926p pro...    30   2.8  
AE014297-3735|AAF56414.2|  773|Drosophila melanogaster CG10244-P...    30   2.8  
AE014134-3020|AAF53743.1| 1049|Drosophila melanogaster CG17492-P...    30   2.8  

>AY069191-1|AAL39336.1| 1191|Drosophila melanogaster GH24511p protein.
          Length = 1191

 Score =  215 bits (524), Expect = 7e-56
 Identities = 99/146 (67%), Positives = 116/146 (79%)
 Frame = -3

Query: 721  LELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPSTNTYNENKWTLWDRFEVKGEITL 542
            LE+ KL  G   L  FKNGF NLALPF  FSEP+  + NTY   +WTLWDRFEV GE++L
Sbjct: 1046 LEVIKLIVGHRDLVKFKNGFANLALPFMAFSEPLPAAKNTYYGKEWTLWDRFEVTGELSL 1105

Query: 541  QQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLERLNLPMSEVVTKVSKKKLEPHVN 362
            Q+FL++F+   KL+ITMLSQGV MLYSFFMPKAK  ERL LPMSEVV +VSK++LEPH  
Sbjct: 1106 QEFLNYFEENEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRRLEPHER 1165

Query: 361  ALVFELCCNDDDGNDVEVPYVKYTLP 284
            +LVFE+CCND DG DVEVPYV+YTLP
Sbjct: 1166 SLVFEICCNDVDGEDVEVPYVRYTLP 1191


>AE013599-908|AAF58910.2| 1191|Drosophila melanogaster CG1782-PA
            protein.
          Length = 1191

 Score =  215 bits (524), Expect = 7e-56
 Identities = 99/146 (67%), Positives = 116/146 (79%)
 Frame = -3

Query: 721  LELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPSTNTYNENKWTLWDRFEVKGEITL 542
            LE+ KL  G   L  FKNGF NLALPF  FSEP+  + NTY   +WTLWDRFEV GE++L
Sbjct: 1046 LEVIKLIVGHRDLVKFKNGFANLALPFMAFSEPLPAAKNTYYGKEWTLWDRFEVTGELSL 1105

Query: 541  QQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLERLNLPMSEVVTKVSKKKLEPHVN 362
            Q+FL++F+   KL+ITMLSQGV MLYSFFMPKAK  ERL LPMSEVV +VSK++LEPH  
Sbjct: 1106 QEFLNYFEENEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRRLEPHER 1165

Query: 361  ALVFELCCNDDDGNDVEVPYVKYTLP 284
            +LVFE+CCND DG DVEVPYV+YTLP
Sbjct: 1166 SLVFEICCNDVDGEDVEVPYVRYTLP 1191


>Y15895-1|CAA75816.1| 1008|Drosophila melanogaster ubiquitin
            activating enzyme protein.
          Length = 1008

 Score =  209 bits (511), Expect = 3e-54
 Identities = 97/147 (65%), Positives = 114/147 (77%)
 Frame = -3

Query: 724  CLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPSTNTYNENKWTLWDRFEVKGEIT 545
            CLE+ KL  G   L  FK    NLALPF  FSEP+  + NTY   +WTLWDRFEV GE++
Sbjct: 862  CLEVIKLIVGHRDLVKFKKPCANLALPFMAFSEPLPAAKNTYYGKEWTLWDRFEVTGELS 921

Query: 544  LQQFLDHFKNEHKLEITMLSQGVCMLYSFFMPKAKRLERLNLPMSEVVTKVSKKKLEPHV 365
            LQ+FL++F+   KL+ITMLSQGV MLYSFFMPKAK  ERL LPMSEVV +VSK++LEPH 
Sbjct: 922  LQEFLNYFEENEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRRLEPHE 981

Query: 364  NALVFELCCNDDDGNDVEVPYVKYTLP 284
             +LVFE+CCND DG DVEVPYV+YTLP
Sbjct: 982  RSLVFEICCNDVDGEDVEVPYVRYTLP 1008


>BT016111-1|AAV36996.1| 1049|Drosophila melanogaster LD11955p
           protein.
          Length = 1049

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = -3

Query: 352 FELC--CNDDDGNDVEVPYVKYTLP*SI*CDLEPSQSGAEK 236
           + LC  C  +D +D+E P+++YT P S+   L P + GA++
Sbjct: 108 YHLCAYCYAEDLHDIEHPFIRYTTPNSLGVRL-PMRKGAKR 147


>BT001657-1|AAN71412.1|  773|Drosophila melanogaster RE45289p
           protein.
          Length = 773

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 KKLEPHVNALVFELCCNDDDGNDVEVPYV 299
           K LEPH+N +    CC D D   V + YV
Sbjct: 526 KSLEPHINVVHLLGCCTDKDPTFVILEYV 554


>BT001586-1|AAN71341.1|  527|Drosophila melanogaster RE26413p
           protein.
          Length = 527

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 KKLEPHVNALVFELCCNDDDGNDVEVPYV 299
           K LEPH+N +    CC D D   V + YV
Sbjct: 280 KSLEPHINVVHLLGCCTDKDPTFVILEYV 308


>AY070958-1|AAL48580.1|  773|Drosophila melanogaster RE05926p
           protein.
          Length = 773

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 KKLEPHVNALVFELCCNDDDGNDVEVPYV 299
           K LEPH+N +    CC D D   V + YV
Sbjct: 526 KSLEPHINVVHLLGCCTDKDPTFVILEYV 554


>AE014297-3735|AAF56414.2|  773|Drosophila melanogaster CG10244-PA
           protein.
          Length = 773

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -3

Query: 385 KKLEPHVNALVFELCCNDDDGNDVEVPYV 299
           K LEPH+N +    CC D D   V + YV
Sbjct: 526 KSLEPHINVVHLLGCCTDKDPTFVILEYV 554


>AE014134-3020|AAF53743.1| 1049|Drosophila melanogaster CG17492-PA
           protein.
          Length = 1049

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
 Frame = -3

Query: 352 FELC--CNDDDGNDVEVPYVKYTLP*SI*CDLEPSQSGAEK 236
           + LC  C  +D +D+E P+++YT P S+   L P + GA++
Sbjct: 108 YHLCAYCYAEDLHDIEHPFIRYTTPNSLGVRL-PMRKGAKR 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,570,581
Number of Sequences: 53049
Number of extensions: 654724
Number of successful extensions: 1589
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)