Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14f16
(721 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p pro... 217 1e-56
AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-P... 217 1e-56
AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-P... 217 1e-56
AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p pro... 63 4e-10
AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA... 63 4e-10
AF220178-1|AAG28589.1| 173|Drosophila melanogaster fruitless ty... 32 0.68
U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless clas... 32 0.90
AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless cl... 32 0.90
AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-P... 32 0.90
AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-P... 32 0.90
BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p pro... 29 6.4
AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-P... 29 6.4
AE014297-912|AAN13419.2| 411|Drosophila melanogaster CG33936-PD... 29 6.4
AE014297-911|AAZ52520.1| 469|Drosophila melanogaster CG33936-PC... 29 6.4
AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB... 29 6.4
AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA... 29 6.4
BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p pro... 29 8.4
AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-P... 29 8.4
>AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p
protein.
Length = 345
Score = 217 bits (530), Expect = 1e-56
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Frame = -2
Query: 720 DVVVSILTSNKVVLDVY--LGKDGVVAHAKKGSLXIDSSTIDPNVPKQIFPIALEKGLGF 547
D V+++L +N +V Y + DGV K ++ IDSSTI P++ K + KG F
Sbjct: 107 DFVITMLPNNAIVDASYDEMTADGV----NKDTIFIDSSTISPDLVKSLQKKISAKGARF 162
Query: 546 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNM 367
DAPVSGGV GA+ ATL FM GG + ++ +L+ MG K HCG G GQ AKL NNM
Sbjct: 163 IDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNM 222
Query: 366 LMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYD 187
++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP++R+Y
Sbjct: 223 MLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYA 282
Query: 186 GGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKEE 10
GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L+K+E
Sbjct: 283 GGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMKKE 341
>AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-PB,
isoform B protein.
Length = 324
Score = 217 bits (530), Expect = 1e-56
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Frame = -2
Query: 720 DVVVSILTSNKVVLDVY--LGKDGVVAHAKKGSLXIDSSTIDPNVPKQIFPIALEKGLGF 547
D V+++L +N +V Y + DGV K ++ IDSSTI P++ K + KG F
Sbjct: 86 DFVITMLPNNAIVDASYDEMTADGV----NKDTIFIDSSTISPDLVKSLQKKISAKGARF 141
Query: 546 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNM 367
DAPVSGGV GA+ ATL FM GG + ++ +L+ MG K HCG G GQ AKL NNM
Sbjct: 142 IDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNM 201
Query: 366 LMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYD 187
++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP++R+Y
Sbjct: 202 MLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYA 261
Query: 186 GGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKEE 10
GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L+K+E
Sbjct: 262 GGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMKKE 320
>AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-PA,
isoform A protein.
Length = 324
Score = 217 bits (530), Expect = 1e-56
Identities = 106/239 (44%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Frame = -2
Query: 720 DVVVSILTSNKVVLDVY--LGKDGVVAHAKKGSLXIDSSTIDPNVPKQIFPIALEKGLGF 547
D V+++L +N +V Y + DGV K ++ IDSSTI P++ K + KG F
Sbjct: 86 DFVITMLPNNAIVDASYDEMTADGV----NKDTIFIDSSTISPDLVKSLQKKISAKGARF 141
Query: 546 TDAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNM 367
DAPVSGGV GA+ ATL FM GG + ++ +L+ MG K HCG G GQ AKL NNM
Sbjct: 142 IDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAKLCNNM 201
Query: 366 LMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYD 187
++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP++R+Y
Sbjct: 202 MLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPANRDYA 261
Query: 186 GGFKNELMVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQLLKEE 10
GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L+K+E
Sbjct: 262 GGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDLMKKE 320
>AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p protein.
Length = 602
Score = 62.9 bits (146), Expect = 4e-10
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Frame = -2
Query: 720 DVVVSILTSNKVVLDVYLGKDGVVAHAK-KGSLXIDSSTIDPNVPKQIFPIALEKGLGFT 544
DV+ ++ K D+ G GV+ ++ STIDP+ I + +
Sbjct: 373 DVIFCCVSDPKGAKDLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYL 432
Query: 543 DAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNML 364
+A + G A L +AGG + FE K + F G IG+ L +
Sbjct: 433 EAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTI 492
Query: 363 MGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDG 184
+G++ + AE + + + + ++D+ + +S +S P L+ D
Sbjct: 493 LGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKGDF 543
Query: 183 GFKNEL--MVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVF 28
+ L M +DL L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 544 NPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
>AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA
protein.
Length = 602
Score = 62.9 bits (146), Expect = 4e-10
Identities = 51/234 (21%), Positives = 96/234 (41%), Gaps = 3/234 (1%)
Frame = -2
Query: 720 DVVVSILTSNKVVLDVYLGKDGVVAHAK-KGSLXIDSSTIDPNVPKQIFPIALEKGLGFT 544
DV+ ++ K D+ G GV+ ++ STIDP+ I + +
Sbjct: 373 DVIFCCVSDPKGAKDLVFGNCGVLQLKDLNNKAYVEMSTIDPDTSLDIGEGIKQCNGRYL 432
Query: 543 DAPVSGGVMGAQNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNML 364
+A + G A L +AGG + FE K + F G IG+ L +
Sbjct: 433 EAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQTI 492
Query: 363 MGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDG 184
+G++ + AE + + + + ++D+ + +S +S P L+ D
Sbjct: 493 LGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKGDF 543
Query: 183 GFKNEL--MVKDLELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVF 28
+ L M +DL L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 544 NPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
>AF220178-1|AAG28589.1| 173|Drosophila melanogaster fruitless
type-B protein.
Length = 173
Score = 32.3 bits (70), Expect = 0.68
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 676 RVPGQRWRCGSCEKRIAXDRFEYNRSECSQTDL-PYSP 566
R PG WRC SC K + +R+ + S +Q + PY P
Sbjct: 109 RDPGTMWRCRSCGKEVT-NRWHHFHSHAAQRSMCPYCP 145
>U72492-1|AAB92662.1| 675|Drosophila melanogaster fruitless class I
female isoform protein.
Length = 675
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 676 RVPGQRWRCGSCEKRIAXDRFEYNRSECSQTDL-PYSP 566
R PG WRC SC K + +R+ + S +Q + PY P
Sbjct: 611 RDPGTMWRCRSCGKEVT-NRWHHFHSHTAQRSMCPYCP 647
>AF039231-1|AAB96677.1| 776|Drosophila melanogaster fruitless class
I male isoform protein.
Length = 776
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 676 RVPGQRWRCGSCEKRIAXDRFEYNRSECSQTDL-PYSP 566
R PG WRC SC K + +R+ + S +Q + PY P
Sbjct: 712 RDPGTMWRCRSCGKEVT-NRWHHFHSHTAQRSMCPYCP 748
>AE014297-2529|AAN13774.1| 688|Drosophila melanogaster CG14307-PF,
isoform F protein.
Length = 688
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 676 RVPGQRWRCGSCEKRIAXDRFEYNRSECSQTDL-PYSP 566
R PG WRC SC K + +R+ + S +Q + PY P
Sbjct: 624 RDPGTMWRCRSCGKEVT-NRWHHFHSHTAQRSMCPYCP 660
>AE014297-2528|AAF55562.2| 789|Drosophila melanogaster CG14307-PB,
isoform B protein.
Length = 789
Score = 31.9 bits (69), Expect = 0.90
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 676 RVPGQRWRCGSCEKRIAXDRFEYNRSECSQTDL-PYSP 566
R PG WRC SC K + +R+ + S +Q + PY P
Sbjct: 725 RDPGTMWRCRSCGKEVT-NRWHHFHSHTAQRSMCPYCP 761
>BT001732-1|AAN71487.1| 199|Drosophila melanogaster RE70963p
protein.
Length = 199
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 655 RCGSCEKRIAXDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 506
RCG C K++ F +C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGF-----QCRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
>AE014297-3749|AAF56430.2| 2695|Drosophila melanogaster CG11856-PA
protein.
Length = 2695
Score = 29.1 bits (62), Expect = 6.4
Identities = 31/100 (31%), Positives = 44/100 (44%)
Frame = +2
Query: 275 FSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLVSLATCPEPICPQWNCLAPITLRRGR 454
F+T+ FG+SPI +P + +P +PI S A P PI N P T
Sbjct: 1097 FNTTTPVFGASPIQVP--QSKPLTVPTVPI----PSTAPAP-PIAGTVN--PPAT----- 1142
Query: 455 DLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 574
+++ PP +VA P PP PS F+RA+
Sbjct: 1143 ----TAVPPPVHIPQVAPSVPAQPPAPAPVSVPSMFNRAL 1178
>AE014297-912|AAN13419.2| 411|Drosophila melanogaster CG33936-PD,
isoform D protein.
Length = 411
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 655 RCGSCEKRIAXDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 506
RCG C K++ F +C L + + H CT +R HG E
Sbjct: 351 RCGECRKKVGLTGF-----QCRCGGLYCAVHRYSDKHNCTFDYREHGAQE 395
>AE014297-911|AAZ52520.1| 469|Drosophila melanogaster CG33936-PC,
isoform C protein.
Length = 469
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 655 RCGSCEKRIAXDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 506
RCG C K++ F +C L + + H CT +R HG E
Sbjct: 409 RCGECRKKVGLTGF-----QCRCGGLYCAVHRYSDKHNCTFDYREHGAQE 453
>AE014297-910|AAF54361.2| 199|Drosophila melanogaster CG33936-PB,
isoform B protein.
Length = 199
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 655 RCGSCEKRIAXDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 506
RCG C K++ F +C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGF-----QCRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
>AE014297-909|AAF54360.2| 199|Drosophila melanogaster CG33936-PA,
isoform A protein.
Length = 199
Score = 29.1 bits (62), Expect = 6.4
Identities = 15/50 (30%), Positives = 21/50 (42%)
Frame = -1
Query: 655 RCGSCEKRIAXDRFEYNRSECSQTDLPYSPRERAGIHRCTCIWRSHGCSE 506
RCG C K++ F +C L + + H CT +R HG E
Sbjct: 139 RCGECRKKVGLTGF-----QCRCGGLYCAVHRYSDKHNCTFDYREHGAQE 183
>BT021296-1|AAX33444.1| 1288|Drosophila melanogaster RE26350p
protein.
Length = 1288
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 228 GLDSTPRSTRSEPMSCSARPTEPSVRVPF*CPCSCTQL*PF 350
G D TP++ + EP +A P P+ P P S + P+
Sbjct: 563 GADQTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPY 603
>AE014297-1888|AAF55090.2| 1288|Drosophila melanogaster CG33967-PA
protein.
Length = 1288
Score = 28.7 bits (61), Expect = 8.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +3
Query: 228 GLDSTPRSTRSEPMSCSARPTEPSVRVPF*CPCSCTQL*PF 350
G D TP++ + EP +A P P+ P P S + P+
Sbjct: 563 GADQTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPY 603
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,288,744
Number of Sequences: 53049
Number of extensions: 899160
Number of successful extensions: 4327
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4285
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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