Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14f13
(656 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 68 8e-12
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 62 4e-10
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 60 1e-09
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 60 2e-09
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853... 59 4e-09
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 51 9e-07
01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924... 42 3e-04
01_06_0777 + 31919196-31919909,31919984-31920082 31 0.61
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 30 1.4
02_04_0509 - 23554609-23555241,23555371-23556318 30 1.4
05_04_0240 + 19325981-19326260,19327135-19327156,19327361-193274... 30 1.9
08_02_0126 + 12835431-12838183,12838471-12838566,12838920-128389... 29 3.3
05_01_0520 - 4492182-4492780,4496886-4497951 29 3.3
11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580 29 4.3
02_05_0797 - 31805956-31806902,31806992-31807505 29 4.3
12_01_0610 + 5030130-5030247,5030957-5033193 28 5.7
02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 28 5.7
12_01_0272 + 1985348-1986036,1986142-1988020 28 7.5
11_06_0307 - 22250221-22250482,22250664-22250758 28 7.5
10_08_0798 + 20649370-20649428,20649515-20649719 28 7.5
09_04_0524 + 18321110-18323978,18324098-18324576 28 7.5
04_04_0702 + 27383876-27384862 28 7.5
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 28 7.5
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 28 7.5
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 7.5
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 28 7.5
10_01_0160 - 1812213-1813790 27 9.9
07_01_0314 - 2219664-2221091 27 9.9
04_04_1162 - 31383886-31384644 27 9.9
03_06_0327 - 33158131-33158315,33158586-33158639,33159149-331591... 27 9.9
03_06_0243 + 32598782-32598793,32599037-32599123,32601052-326012... 27 9.9
02_04_0203 - 20888010-20888162,20888242-20888469,20888969-208890... 27 9.9
02_02_0099 + 6768115-6768285,6769950-6770034,6770501-6770628,677... 27 9.9
01_07_0016 - 40476014-40476333,40476598-40476740,40476945-404790... 27 9.9
01_06_0505 - 29871692-29872198,29878940-29879359 27 9.9
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 67.7 bits (158), Expect = 8e-12
Identities = 51/158 (32%), Positives = 68/158 (43%), Gaps = 8/158 (5%)
Frame = -1
Query: 521 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP-------TLQYSFVP 363
V +LQ+ L+G L PD IGG N +P +L RW+ P T P
Sbjct: 421 VPMVLQLGLSGQPLSGPD-IGGFAGNATP--KLFGRWMGLGALFPFSRGHTETGSIDHEP 477
Query: 362 WDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEF 183
W EE E+CR I S KGTPV P+++ DP D + + F
Sbjct: 478 WSFGEECEEVCRLALLRRYRLLPHIYTLFYFSHMKGTPVAAPVFFADPQDPELRKIETSF 537
Query: 182 LLGE-RVLAAPVLQQGAVSRDVYLPRGSWRDGVTGELH 72
LLG V A+ V +GA LP+G+W G+ H
Sbjct: 538 LLGPLLVCASTVPDKGAHECSHKLPKGNWLPFDFGDSH 575
>03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 62.1 bits (144), Expect = 4e-10
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Frame = -1
Query: 566 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGN--GYNESPSKELLVRWLQANVF 393
D WD L + + +L + L G T + + G + G+ +P +LLVRW Q F
Sbjct: 586 DNSADWDH---LKSSIPMVLTLGLTGMTFSVGALTGADIGGFFGNPEPDLLVRWYQVGAF 642
Query: 392 MPTLQYSF-------VPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPI 234
P + PW E + R+ H+ + G PV P+
Sbjct: 643 YPFFRGHAHHDTKRREPWLFGERRTALMREAIHMRYSLLPYYYTLFREASVTGVPVMRPL 702
Query: 233 WWLDPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDVYLP-RGSWRDGVTGELHQG 66
W P D++ + F++G +LA + ++G S VYLP W D G ++G
Sbjct: 703 WLEFPDDKETYNNGEAFMVGPSLLAQGIYEEGQKSVSVYLPGEELWYDLRNGSPYKG 759
>06_03_1108 - 27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Frame = -1
Query: 521 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP---------TLQYSF 369
+ T+L L G ++ D+ G G + ++EL RW+Q F P T++
Sbjct: 631 INTMLSFGLFGIPMIGADICGFGG---NTTEELCSRWIQLGAFYPFSRDHSAIGTVRREL 687
Query: 368 VPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWD 189
W E RK L + M + G P+ P+++ P D + +
Sbjct: 688 YLW---ESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVETYGIDR 744
Query: 188 EFLLGERVLAAPVLQQGAVSRDVYLPRGSW 99
+FLLG VL +PVL+ GA + Y P G W
Sbjct: 745 QFLLGRGVLVSPVLEPGATTVTAYFPAGRW 774
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 59.7 bits (138), Expect = 2e-09
Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Frame = -1
Query: 566 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 387
D WD L + T+L L G ++ D+ G G + ++EL RW+Q F P
Sbjct: 295 DNFATWD---DLRYSINTMLSFGLFGIPMIGADICGFGG---NTTEELCSRWIQLGAFYP 348
Query: 386 ---------TLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPI 234
T++ W E RK L + M + G P+ P+
Sbjct: 349 FSRDHSAIGTVRRELYLW---ESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPL 405
Query: 233 WWLDPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDVYLPRGSW 99
++ P D + +FLLG VL +PVL+ GA + Y P G W
Sbjct: 406 FFSYPGDVATYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRW 450
>07_03_0108 +
13481249-13481464,13484556-13484693,13485320-13485388,
13485462-13485599,13485685-13485802,13486265-13486347,
13486921-13487013,13487801-13487969,13488056-13488129,
13488448-13488633,13490009-13490101,13490469-13490534,
13490618-13490785,13491199-13491319,13492072-13492141,
13492389-13492476,13492565-13492685,13492964-13493157,
13493239-13493347,13493488-13493643,13493858-13493957,
13494115-13494288,13494549-13494694,13494796-13494860,
13495013-13495018
Length = 986
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 8/155 (5%)
Frame = -1
Query: 512 LLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ-------YSFVPWDH 354
++ + L+G PD IGG N +P +L RW+ P + PW
Sbjct: 478 IVDLGLSGQPFAGPD-IGGFAGNATP--KLFGRWMGVGALFPFSRGHSDKGSLDHEPWSF 534
Query: 353 DEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLG 174
EE E+CR I S GTPV P+++ DP D + + FLLG
Sbjct: 535 GEECEEVCRLALLRRYRLLPHIYTLFYLSHTNGTPVAAPVYFADPQDLELRKIETSFLLG 594
Query: 173 ERVLAAPVL-QQGAVSRDVYLPRGSWRDGVTGELH 72
++ A +GA LP+G W G+ H
Sbjct: 595 SLLVCASTCPDKGAHESSQKLPKGIWLPFDFGDSH 629
>01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 50.8 bits (116), Expect = 9e-07
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Frame = -1
Query: 521 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ--YSFVPWDHD- 351
++T+L + G +V D+ G + P++EL RW++ F P + +F +
Sbjct: 584 ISTMLNFGIFGMPMVGADICG---FYPQPTEELCNRWIELGAFYPFSRDHANFASPRQEL 640
Query: 350 ---EEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFL 180
E + R + + + G PV P+++ P + ++L
Sbjct: 641 YVWESVAKSARNALGMRYRLLPYLYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYL 700
Query: 179 LGERVLAAPVLQQGAVSRDVYLPRGSW 99
LG V+ +PVL+QGA S P GSW
Sbjct: 701 LGASVMVSPVLEQGATSVSAMFPPGSW 727
>01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,
9249802-9249957,9250788-9250979,9251118-9251234,
9251822-9252193
Length = 768
Score = 42.3 bits (95), Expect = 3e-04
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 17/172 (9%)
Frame = -1
Query: 542 NNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESP------SKELLVRWLQANVFMPTL 381
N+G+ + V LL ++G+ L D GG + P S+ELL+RWL+ + F
Sbjct: 544 NDGIKSSVVGLLTGGMSGFPLNHGDA-GGYCTVDLPLLRYRRSEELLLRWLELSAFTVVF 602
Query: 380 QY-------SFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLD 222
+ S + + + + ++ + + +E + +KG PV ++
Sbjct: 603 RTHEGNKPGSNCQFYSNNRTLAHFARCAKIYKAWEFYRIQLVEEAAEKGLPVARHLFLHY 662
Query: 221 PTDQDALAV-WDEFLLGERVLAAPVLQQGAVSRDVYLPR---GSWRDGVTGE 78
P DQ + + +FL+G +L PVL +G + Y P G W+ TG+
Sbjct: 663 PEDQRVQKMTYQQFLVGTEMLVVPVLDKGRSTVTAYFPMSDGGLWKHVWTGD 714
>01_06_0777 + 31919196-31919909,31919984-31920082
Length = 270
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +2
Query: 140 PAAVPGQPARALLTRTRPKQPKRPGR*DPTTRWEGSREFLFGWTPP 277
P P +PA A + +R P +P DP E S + GW PP
Sbjct: 57 PLGAPPRPAAAAASPSRAALPDKPWVCDPPPEPEPSASWGCGWGPP 102
>08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -1
Query: 407 QANVFMPTLQYSFVPWDHDEEAV-EICRKYTHLHAE 303
+AN+F P+L +++P +HDE + E C T L E
Sbjct: 1824 EANLFAPSLSNAYLPSEHDENHIEEKCSNATLLEDE 1859
>02_04_0509 - 23554609-23555241,23555371-23556318
Length = 526
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 209 DALAVWDEFLLGERVLAAPVLQQ-GAVSRDVY-LPRGSWRDGVTGELHQ 69
+ +A W F+ LA +L + GA RDV LP G WR V G LHQ
Sbjct: 2 EQVAYW--FICACAFLALVLLVRLGAARRDVVRLPPGPWRLPVVGNLHQ 48
>05_04_0240 +
19325981-19326260,19327135-19327156,19327361-19327484,
19327721-19327811,19327984-19328073,19328450-19328550,
19328702-19328866
Length = 290
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -1
Query: 494 NGYTLVLPDMIGGNGYNESPSKELLVRWLQAN 399
+GY +V+PD++ G+ Y + P++ V W+ A+
Sbjct: 110 SGYYVVVPDLLYGDPYTDDPARPFWV-WIMAH 140
>08_02_0126 +
12835431-12838183,12838471-12838566,12838920-12838971,
12839198-12839298,12839349-12839370
Length = 1007
Score = 29.1 bits (62), Expect = 3.3
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -3
Query: 252 SREPSHLVVGSYRPGRFGCLGRVLVRRARAGCPGTA 145
SRE SH SYRPG F L R LV R G A
Sbjct: 116 SRERSH----SYRPGTFAALARRLVDARRYAAAGRA 147
>05_01_0520 - 4492182-4492780,4496886-4497951
Length = 554
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 558 VFVNHADEDWEVLGSHARSDLDHWAELG 641
+ VNHA W VL ARSD A LG
Sbjct: 355 ILVNHATRQWVVLPESARSDKRQIAYLG 382
>11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580
Length = 1101
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -1
Query: 524 LVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELL-VRWLQANVFMPTLQYSFVPWDHDE 348
L +L ++ N L D+ G+ S E +R+LQ F+ Y +DH
Sbjct: 422 LFCSLFPLDFNFTAEELADLFAAKGFIPSTVPEAQRIRFLQQ--FLDECFYPVEEYDHGG 479
Query: 347 EAVEICRKYTHLHAEYADEIVAAM 276
+ K H+ +YAD + +++
Sbjct: 480 RHMYRMHKILHIFVQYADRVSSSI 503
>02_05_0797 - 31805956-31806902,31806992-31807505
Length = 486
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -1
Query: 608 GMRTQDLPVFVRMVDKDT-LWDFNNGLATLVTTLLQMNLNGYTLVLPDMI 462
G+R +D+P F+R D+D + +F++G A + LN + V D++
Sbjct: 193 GIRLRDMPSFIRTTDRDEFMLNFDSGEAQNARHAQGLILNTFDAVEHDVV 242
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -2
Query: 373 RLCPGIMMKRQ*KSAANTRIFTPNMLMRSWPLWRRPSKKELP*TLPSGG-WI 221
R C ++ + +A+NT++ P +L+ + P+ RR +K E LP+G W+
Sbjct: 307 RYCKNVVQRHIQVAASNTQMENPVVLVDNHPMCRRNTKGER--VLPNGKVWV 356
>02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225
Length = 489
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 608 GMRTQDLPVFVRMVD-KDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMI 462
G+R +D+P F+R D D + +F+ G A + LN Y + D++
Sbjct: 199 GIRLKDVPSFIRTTDPDDVMLNFDGGEAQNARKARGLILNTYDALEQDVV 248
>12_01_0272 + 1985348-1986036,1986142-1988020
Length = 855
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -1
Query: 296 DEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDE----FLLGERVLAAPVLQQGAVS 129
+ +++ + A +++ P D D + +WDE +LL LAA V Q A+S
Sbjct: 658 NSLLSKLGAPLEEDAGERLPHTAADGGDGEPRDLWDEKLPKYLLLLAALAAAVTYQAAMS 717
Query: 128 RDVYLPRGSWRDGVTGELHQGPLWL 54
P G W DG T + P+ L
Sbjct: 718 P----PGGLWDDGQTEHIVGDPVLL 738
>11_06_0307 - 22250221-22250482,22250664-22250758
Length = 118
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 516 RDQRRETVVEVPKGVFVNHADEDWEVLGS 602
R +RR P GVF D +W V+GS
Sbjct: 65 RSRRRGATARNPGGVFALGDDAEWHVIGS 93
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 136 PCPGTCICRAAPGGTASPGSFTRVHCG 56
PCPG CR A + G T CG
Sbjct: 12 PCPGGTGCRCASSARSGGGDHTTCSCG 38
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 415 LTSNSLLGDSL*PFPPIISGSTNVYPLRFICNRV 516
L SN L G P PP I G N+Y LR NR+
Sbjct: 452 LISNELSG----PIPPEIGGCGNLYRLRLSVNRL 481
>04_04_0702 + 27383876-27384862
Length = 328
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 121 TSRDTAPCCSTGAASTRSPNKNSSQTAKASWS 216
TSRDT P S+ A SS +SWS
Sbjct: 265 TSRDTTPATSSAGAEHAGAAAESSPATPSSWS 296
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 121 TSRDTAPCCST-GAASTRSPNKNSSQTAKASWSV 219
+ RD C ST GAA+ R P + + TA A W V
Sbjct: 79 SDRDDDGCSSTAGAAARRLPLPSGASTAAAVWPV 112
>03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
Frame = +3
Query: 327 AADFYCLFIM---IPGHKRVLKR 386
AA YCL+++ +PG+KRV KR
Sbjct: 1439 AAGIYCLYLVLETVPGNKRVFKR 1461
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +1
Query: 91 PSRQEPRGRYTSRDTAPCCSTGAASTRSPNKN-SSQTAKASWSVGSNHQMGGFTGV 255
PSR R ++D AP G S + + ++ A A + GS HQ+GG + +
Sbjct: 195 PSRSSARNGTMTKDGAPDRINGTDVIASSSGDVTAVKANARNAAGSTHQLGGASAI 250
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/101 (24%), Positives = 42/101 (41%)
Frame = -1
Query: 452 GYNESPSKELLVRWLQANVFMPTLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAME 273
GY P E + RWL +PT ++ PWD E ++ L + Y IV ++
Sbjct: 441 GYKFDPHGEYVRRWLPELARLPT-EWIHHPWDAPESVLQAAG--IELGSNYPLPIV-ELD 496
Query: 272 ASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLGERVLAAPV 150
A+ + +W L+ + A+ E LG+ P+
Sbjct: 497 AAKTRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPI 537
>10_01_0160 - 1812213-1813790
Length = 525
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 296 DEIVAAMEA-SIQKGTPVNPPIWWLDPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDV 120
D+++AA+ P PP WL P +D L + G+R AA +LQ VS+
Sbjct: 219 DDVLAALRMIGYTDAVPDLPP--WLSPEAKDFLRRCMQRRAGDRPTAAQLLQHPFVSKSC 276
Query: 119 YLPR 108
L +
Sbjct: 277 GLKK 280
>07_01_0314 - 2219664-2221091
Length = 475
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 140 PAAVPGQPARALLTRT-RPKQPKRPGR*DPTTRWEGS 247
P P P R + TRT +P +P RP P T W+ S
Sbjct: 6 PTPPPSPPVRVVSTRTVKPSRP-RPRERIPLTTWDVS 41
>04_04_1162 - 31383886-31384644
Length = 252
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -2
Query: 133 CPGTCICRAAPGGTASPGSFTRVHCGYGTXPAPLDTLP 20
C T CR APG A+ S V G GT P +P
Sbjct: 139 CASTGACRVAPGAVAARASAAAV--GGGTTKVPAGHVP 174
>03_06_0327 -
33158131-33158315,33158586-33158639,33159149-33159180,
33159275-33159369,33159466-33159539,33159643-33159778,
33159874-33159937,33160017-33160079,33160160-33160299,
33160487-33160627,33160747-33160868,33160947-33161112,
33161194-33161313,33161580-33161651,33161787-33161843,
33162036-33162152,33162231-33162369,33162794-33162900,
33162972-33163081,33163172-33163305,33163397-33163546,
33163635-33163840,33166123-33166818
Length = 1059
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 194 WDEFLLGERVLAAPVLQQGAVSRDVYLP 111
WD + + + P LQ G+ SR VYLP
Sbjct: 485 WDRYNYRLKYASWPCLQSGSDSRPVYLP 512
>03_06_0243 +
32598782-32598793,32599037-32599123,32601052-32601257,
32601342-32601453,32601628-32601724,32601815-32601924,
32601996-32602153,32602559-32602697,32602776-32602892,
32603084-32603140,32603280-32603351,32603617-32603736,
32603818-32603983,32604067-32604188,32604373-32604447,
32604636-32604775,32604860-32604922,32605002-32605065,
32605161-32605296,32605401-32605474,32605570-32605664,
32605761-32605792,32606344-32606474,32606595-32606827,
32606916-32607723,32607815-32607967
Length = 1192
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -1
Query: 194 WDEFLLGERVLAAPVLQQGAVSRDVYLP 111
WD + + + P LQ G+ SR VYLP
Sbjct: 278 WDRYNYRLKYASWPCLQSGSDSRPVYLP 305
>02_04_0203 -
20888010-20888162,20888242-20888469,20888969-20889073,
20889148-20889225,20889308-20889382,20890037-20890123,
20890216-20890283,20890396-20890483,20890583-20890683,
20890793-20890913,20891008-20891169,20891271-20891441
Length = 478
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +1
Query: 91 PSRQEPRGRYTSRDTA--PCCSTGAASTRSPNKNSSQTAKAS 210
PS PR R ++ A PCCST A R ++ S KA+
Sbjct: 19 PSPPPPRPRVSAAAAASFPCCSTSAGGLRLRSRPSRFPQKAA 60
>02_02_0099 +
6768115-6768285,6769950-6770034,6770501-6770628,
6771429-6771465,6773108-6774193,6774337-6774447,
6774701-6774817,6774818-6775120,6776092-6776513,
6776645-6777274
Length = 1029
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -1
Query: 395 FMPT-LQYSFVPWDHDEEAVEICRKYTHLHAE 303
F+PT Q+ F EA+E+CRKY + E
Sbjct: 827 FLPTKTQFGFFSASMSHEALEMCRKYMNKPVE 858
>01_07_0016 -
40476014-40476333,40476598-40476740,40476945-40479099,
40479205-40480047,40480176-40480269,40480356-40481207,
40481367-40481437,40481750-40481821,40481977-40482019
Length = 1530
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 163 WLPRYCSRAPCPGTCICRAAPGGTASPGSFTRVHCGY--GTXPAPLDTLPYFT 11
W PR+ + GT RAAPG G + G+ G A +++P FT
Sbjct: 218 WRPRHRQESHSAGTGTYRAAPGFGLEKGRAKESNVGFSAGRGRANPNSIPSFT 270
>01_06_0505 - 29871692-29872198,29878940-29879359
Length = 308
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 563 CQPCGRRLGGLGFSC 607
C CGRR+G +GF C
Sbjct: 248 CAACGRRVGLMGFEC 262
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,571,722
Number of Sequences: 37544
Number of extensions: 548786
Number of successful extensions: 1736
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1729
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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