Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14f10
         (753 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70660-1|AAC51227.1|   68|Homo sapiens copper transport protein ...    38   0.051
BT009786-1|AAP88788.1|   68|Homo sapiens ATX1 antioxidant protei...    38   0.051
BC112250-1|AAI12251.1|   68|Homo sapiens antioxidant protein 1 p...    38   0.051
BC112248-1|AAI12249.1|   68|Homo sapiens antioxidant protein 1 p...    38   0.051
AY986502-1|AAX81411.1|   68|Homo sapiens ATX1 antioxidant protei...    38   0.051
AY165037-1|AAN84554.1|   68|Homo sapiens ATX1-like protein protein.    38   0.051
CR456901-1|CAG33182.1|   68|Homo sapiens ATOX1 protein.                37   0.068

>U70660-1|AAC51227.1|   68|Homo sapiens copper transport protein
           HAH1 protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>BT009786-1|AAP88788.1|   68|Homo sapiens ATX1 antioxidant protein 1
           homolog (yeast) protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>BC112250-1|AAI12251.1|   68|Homo sapiens antioxidant protein 1
           protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>BC112248-1|AAI12249.1|   68|Homo sapiens antioxidant protein 1
           protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>AY986502-1|AAX81411.1|   68|Homo sapiens ATX1 antioxidant protein 1
           homolog (yeast) protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>AY165037-1|AAN84554.1|   68|Homo sapiens ATX1-like protein protein.
          Length = 68

 Score = 37.5 bits (83), Expect = 0.051
 Identities = 17/36 (47%), Positives = 23/36 (63%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVGAQ 632
           I LP +KV + S  S D LL  +KKTGK  +Y+G +
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGLE 68


>CR456901-1|CAG33182.1|   68|Homo sapiens ATOX1 protein.
          Length = 68

 Score = 37.1 bits (82), Expect = 0.068
 Identities = 17/34 (50%), Positives = 22/34 (64%)
 Frame = -3

Query: 739 ISLPEQKVSVXSTLSADDLLEIIKKTGKKTTYVG 638
           I LP +KV + S  S D LL  +KKTGK  +Y+G
Sbjct: 33  IDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG 66


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,443,094
Number of Sequences: 237096
Number of extensions: 2065200
Number of successful extensions: 2318
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2318
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)