Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14f05
(692 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate de... 226 5e-59
AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein. 226 5e-59
AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate d... 226 5e-59
BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein. 88 3e-17
BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear f... 88 3e-17
BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear f... 88 3e-17
BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA 3... 88 3e-17
AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear f... 88 3e-17
AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear f... 88 3e-17
AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate de... 88 3e-17
BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma sub... 31 3.9
AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2 ... 31 3.9
AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2 ... 31 3.9
BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding prote... 30 6.8
AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens ... 30 6.8
M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand fucosyltran... 30 9.0
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 30 9.0
AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase ... 30 9.0
>BC032324-1|AAH32324.1| 336|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 226 bits (553), Expect = 5e-59
Identities = 107/219 (48%), Positives = 149/219 (68%)
Frame = -2
Query: 679 LDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNA 500
++ Y G +G++ KGSL IDSSTIDP V K++ + G F DAPVSGGV A++
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169
Query: 499 TLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNM 320
L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+
Sbjct: 170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229
Query: 319 GIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELA 140
GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA
Sbjct: 230 GIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLA 289
Query: 139 SGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 290 QDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AF529362-1|AAQ09596.1| 336|Homo sapiens NS5ATP1 protein.
Length = 336
Score = 226 bits (553), Expect = 5e-59
Identities = 107/219 (48%), Positives = 149/219 (68%)
Frame = -2
Query: 679 LDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNA 500
++ Y G +G++ KGSL IDSSTIDP V K++ + G F DAPVSGGV A++
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169
Query: 499 TLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNM 320
L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+
Sbjct: 170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229
Query: 319 GIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELA 140
GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA
Sbjct: 230 GIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLA 289
Query: 139 SGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 290 QDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>AB050000-1|BAF42045.1| 336|Homo sapiens 3'-hydroxyisobutyrate
dehydrogenase protein.
Length = 336
Score = 226 bits (553), Expect = 5e-59
Identities = 107/219 (48%), Positives = 149/219 (68%)
Frame = -2
Query: 679 LDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNA 500
++ Y G +G++ KGSL IDSSTIDP V K++ + G F DAPVSGGV A++
Sbjct: 110 IEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSG 169
Query: 499 TLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAECMNM 320
L FM GG +++F + LL MG+ +CG +G+GQ AK+ NNML+ I+ + TAE MN+
Sbjct: 170 NLTFMVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNL 229
Query: 319 GIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELA 140
GI++GL+PK+L +LN SS R WS++ Y PVPG++ PS+ NY GGF LM KDL LA
Sbjct: 230 GIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLA 289
Query: 139 SGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
A +SPI LG++A Q+YR++ ++GY +KDFS VFQ
Sbjct: 290 QDSATSTKSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQ 328
>BC064940-1|AAH64940.1| 484|Homo sapiens N-PAC protein protein.
Length = 484
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 266 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 325
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 326 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 385
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 386 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 438
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 439 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 480
>BC047223-1|AAH47223.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQTMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGRSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC032855-1|AAH32855.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 553
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC003693-1|AAH03693.1| 523|Homo sapiens Similar to RIKEN cDNA
3930401K13 gene protein.
Length = 523
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 305 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 364
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 365 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 424
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 425 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 477
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 478 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 519
>AY352585-1|AAQ57265.1| 553|Homo sapiens cytokine-like nuclear
factor n-pac-like protein protein.
Length = 553
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>AF326966-1|AAK15524.1| 547|Homo sapiens cytokine-like nuclear
factor n-pac protein.
Length = 547
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 329 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 388
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 389 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 448
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 449 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 501
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 502 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 543
>AF244907-1|AAQ14242.1| 553|Homo sapiens 3-hydroxyisobutyrate
dehydrogenase-like protein HIBDL protein.
Length = 553
Score = 87.8 bits (208), Expect = 3e-17
Identities = 56/222 (25%), Positives = 97/222 (43%)
Frame = -2
Query: 688 KVVLDVYLGKDGVVXHAXKGSLXIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGA 509
K D+ LG GV+ G +D ST+D + ++ + + +G F +APVSG +
Sbjct: 335 KAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLS 394
Query: 508 QNATLAFMAGGRKEDFERSLPLLKVMGAKQFHCGQIGSGQVAKLTNNMLMGITGMATAEC 329
+ L +A G + +E + MG F G++G+ L NM+ G AE
Sbjct: 395 NDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEG 454
Query: 328 MNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDL 149
+ + G + LLD+LN S + C ++ N+ F + + KDL
Sbjct: 455 LTLAQVTGQSQQTLLDILNQGQLASIFLDQKC--QNIL-----QGNFKPDFYLKYIQKDL 507
Query: 148 ELASGMALGIRSPIPLGAVATQLYRIVQSRGYGQKDFSFVFQ 23
LA + + P P+ A A ++Y+ ++ D S V++
Sbjct: 508 RLAIALGDAVNHPTPMAAAANEVYKRAKALDQSDNDMSAVYR 549
>BC101805-1|AAI01806.1| 811|Homo sapiens protocadherin gamma
subfamily B, 2 protein.
Length = 811
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 44 FLAVAPGLHDAVELSCDSAQWDRRTN 121
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152518-1|AAD43778.1| 811|Homo sapiens protocadherin gamma B2
short form protein protein.
Length = 811
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 44 FLAVAPGLHDAVELSCDSAQWDRRTN 121
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>AF152331-1|AAD43725.1| 931|Homo sapiens protocadherin gamma B2
protein.
Length = 931
Score = 31.1 bits (67), Expect = 3.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 44 FLAVAPGLHDAVELSCDSAQWDRRTN 121
FL + P L A +L CD+A W++ TN
Sbjct: 767 FLNITPELVPAQDLVCDNASWEQNTN 792
>BC096272-1|AAH96272.1| 560|Homo sapiens HIV-1 Rev binding protein
protein.
Length = 560
Score = 30.3 bits (65), Expect = 6.8
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 468 SLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAIG--KICLGTFGSIVLESIXSDPFXA 641
S + PA A+ AF P T S P+ F+ A G K + FG + + S+PF
Sbjct: 489 SFQQPAFPAQAAF-----PQQTAFSQQPNGFA-AFGQTKPVVTPFGQVAAAGVSSNPFMT 542
Query: 642 *XTTPSLPRYTSST 683
T P +SST
Sbjct: 543 GAPTGQFPTGSSST 556
>AK024112-1|BAB14829.1| 305|Homo sapiens protein ( Homo sapiens
cDNA FLJ14050 fis, clone HEMBA1006796. ).
Length = 305
Score = 30.3 bits (65), Expect = 6.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 560 ERAGIHRCTCIWRSHGCSERYPGLHG 483
E+ G+HR TC +R GC+ PG G
Sbjct: 118 EQPGLHRATCGFRGLGCAPGCPGSGG 143
>M58597-1|AAA63173.1| 530|Homo sapiens ELAM-1 ligand
fucosyltransferase protein.
Length = 530
Score = 29.9 bits (64), Expect = 9.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 22 AGRRTRSLSGRSPWTARCGRAELRQRPMGSANEYPTPCH 138
+GR+ R++ G + W A A R +G A + P P H
Sbjct: 40 SGRKGRAVPGWASWPAHLALAARPARHLGGAGQGPRPLH 78
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 29.9 bits (64), Expect = 9.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +3
Query: 393 PEPICPQWNCLAPITLRRGRDLSKSSLRPPAMKARVAF*APMTPPDTGASVNPSPFSRAI 572
P P+ P W A ++ + S RPP R A + + P GAS + + R++
Sbjct: 195 PRPLAPGWGGRAALSTAPEQPPPLS--RPPLFSPRSAASSVVASPSVGASASATASLRSM 252
Query: 573 GKI 581
G++
Sbjct: 253 GRV 255
>AB025027-1|BAB85656.1| 565|Homo sapiens brain carboxylesterase
hBr2 protein.
Length = 565
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -2
Query: 595 NVPKQIFPIALEKGLGFTDAPV 530
N+P+++ P+A EK LG TD PV
Sbjct: 388 NIPEELTPLASEKYLGGTDDPV 409
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,493,187
Number of Sequences: 237096
Number of extensions: 2869341
Number of successful extensions: 15609
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15596
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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