Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14f02
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro... 33 0.16
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P... 33 0.16
AE014297-4154|AAF56730.2| 445|Drosophila melanogaster CG31058-P... 30 2.0
AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-P... 30 2.0
AE014134-2313|AAF53273.2| 483|Drosophila melanogaster CG31728-P... 28 6.1
X12836-1|CAA31321.1| 463|Drosophila melanogaster K10 protein pr... 28 8.1
BT029088-1|ABJ17021.1| 455|Drosophila melanogaster IP11344p pro... 28 8.1
BT021252-1|AAX33400.1| 553|Drosophila melanogaster RE60459p pro... 28 8.1
AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p pro... 28 8.1
AL009195-3|CAA15702.1| 463|Drosophila melanogaster EG:30B8.5,FB... 28 8.1
AE014298-2688|AAF48813.2| 455|Drosophila melanogaster CG33639-P... 28 8.1
AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA ... 28 8.1
AE014297-2215|AAN13711.1| 698|Drosophila melanogaster CG14897-P... 28 8.1
AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-P... 28 8.1
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 28 8.1
>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p
protein.
Length = 1051
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -3
Query: 338 PGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPYNRPQRPTP 171
PGHV V PG+V +P P + RP P P T A+ Y+ P P
Sbjct: 196 PGHVEDVYLKRPGYVFDESPAPSYRRPTRPPPSLPPPPTTAAH-KISYDSHDYPPP 250
>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
protein.
Length = 1051
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -3
Query: 338 PGHVNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPYNRPQRPTP 171
PGHV V PG+V +P P + RP P P T A+ Y+ P P
Sbjct: 196 PGHVEDVYLKRPGYVFDESPAPSYRRPTRPPPSLPPPPTTAAH-KISYDSHDYPPP 250
>AE014297-4154|AAF56730.2| 445|Drosophila melanogaster CG31058-PA
protein.
Length = 445
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 281 PDPGFSRPVIGQPGYVPISTGPAYVNRPYNRPQRPTP 171
P P F+RP GQP P + P N+P +PQ+ P
Sbjct: 316 PPPTFARPPPGQPLQAPFNRPP--FNQPPMQPQQQQP 350
>AE014134-2738|AAF53546.3| 1700|Drosophila melanogaster CG31738-PB,
isoform B protein.
Length = 1700
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -3
Query: 308 HPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPYNRPQRPTP 171
HP + +N F PV G PG P GP + Y+ P P P
Sbjct: 294 HPAPFISANGTSHFYTPVAGYPGPGPAGNGPPH----YHLPPPPPP 335
>AE014134-2313|AAF53273.2| 483|Drosophila melanogaster CG31728-PA
protein.
Length = 483
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 329 VNVVDNNHPGHVLISNPDPGFSRPVIGQPGYVPISTGPAYVNRPYNRP 186
+N ++ N PG +P +G+P PIST PA PY P
Sbjct: 92 INTIEGNPPGADKKPEAEP------VGEPVEQPISTQPASTIHPYQWP 133
>X12836-1|CAA31321.1| 463|Drosophila melanogaster K10 protein
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 260 PVIGQPGYVPISTGPAYVNRPYNRPQRPTPFPGARG 153
P +G G P GP PY + P P PG RG
Sbjct: 239 PPMGPMGPGPRGPGPMGPGGPYPQMPFPPPVPGMRG 274
>BT029088-1|ABJ17021.1| 455|Drosophila melanogaster IP11344p
protein.
Length = 455
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 275 PGFSRPVIGQPGYVPIST 222
PGF+RPV+G PG V T
Sbjct: 170 PGFARPVMGPPGVVVFLT 187
>BT021252-1|AAX33400.1| 553|Drosophila melanogaster RE60459p
protein.
Length = 553
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 252 RSTRIRANKYWTCVRKPALQQTPKANPVPRS 160
R T ++ K ++CVRKP T A P+S
Sbjct: 234 RETGVKIEKSFSCVRKPGYTTTSLAVSTPKS 264
>AY060415-1|AAL25454.1| 463|Drosophila melanogaster LD37240p
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 260 PVIGQPGYVPISTGPAYVNRPYNRPQRPTPFPGARG 153
P +G G P GP PY + P P PG RG
Sbjct: 239 PPMGPMGPGPRGPGPMGPGGPYPQMPFPPPVPGMRG 274
>AL009195-3|CAA15702.1| 463|Drosophila melanogaster
EG:30B8.5,FBgn0000810;fs(1)K10 protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 260 PVIGQPGYVPISTGPAYVNRPYNRPQRPTPFPGARG 153
P +G G P GP PY + P P PG RG
Sbjct: 239 PPMGPMGPGPRGPGPMGPGGPYPQMPFPPPVPGMRG 274
>AE014298-2688|AAF48813.2| 455|Drosophila melanogaster CG33639-PA
protein.
Length = 455
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 275 PGFSRPVIGQPGYVPIST 222
PGF+RPV+G PG V T
Sbjct: 170 PGFARPVMGPPGVVVFLT 187
>AE014298-367|AAF45758.1| 463|Drosophila melanogaster CG3218-PA
protein.
Length = 463
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3
Query: 260 PVIGQPGYVPISTGPAYVNRPYNRPQRPTPFPGARG 153
P +G G P GP PY + P P PG RG
Sbjct: 239 PPMGPMGPGPRGPGPMGPGGPYPQMPFPPPVPGMRG 274
>AE014297-2215|AAN13711.1| 698|Drosophila melanogaster CG14897-PA,
isoform A protein.
Length = 698
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 252 RSTRIRANKYWTCVRKPALQQTPKANPVPRS 160
R T ++ K ++CVRKP T A P+S
Sbjct: 234 RETGVKIEKSFSCVRKPGYTTTSLAVSTPKS 264
>AE014297-2214|AAF55320.1| 1298|Drosophila melanogaster CG14897-PB,
isoform B protein.
Length = 1298
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 252 RSTRIRANKYWTCVRKPALQQTPKANPVPRS 160
R T ++ K ++CVRKP T A P+S
Sbjct: 234 RETGVKIEKSFSCVRKPGYTTTSLAVSTPKS 264
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = -3
Query: 338 PGHVNVVDNNHPGHVLISNPDPGFSR-PVIGQPGYVPISTGPAYVNRPYNRPQRPTPFPG 162
PG VN+ P P PG P + QP +P + P +N P P+P PG
Sbjct: 19380 PGIVNIPSIPQPTP---QRPSPGIINVPSVPQP--IPTAPSPGIINIPSVPQPLPSPTPG 19434
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,829,952
Number of Sequences: 53049
Number of extensions: 435138
Number of successful extensions: 1537
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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