Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14e24
(378 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 87 3e-18
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 36 0.007
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 36 0.007
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 36 0.007
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 31 0.21
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.27
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 31 0.36
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 0.36
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 29 0.83
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 0.83
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 29 0.83
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 29 1.5
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 28 1.9
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 28 1.9
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 28 1.9
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 28 1.9
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 28 1.9
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 28 1.9
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 3.4
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 3.4
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 27 3.4
AF039718-5|AAP68905.1| 760|Caenorhabditis elegans Prion-like-(q... 27 4.5
AF039718-4|AAP68906.2| 696|Caenorhabditis elegans Prion-like-(q... 27 4.5
Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical pr... 26 7.8
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 26 7.8
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 26 7.8
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 26 7.8
AC006627-10|AAK85465.1| 499|Caenorhabditis elegans Hypothetical... 26 7.8
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 87.4 bits (207), Expect = 3e-18
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = -1
Query: 267 LKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWD 88
L AP+D RFP + R C+ YVDFHRC ++ G+ Y+PC +F+ VY+ CP W ++WD
Sbjct: 48 LWAAPYDARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWD 107
Query: 87 NQRAEGTFAGR 55
+EG F +
Sbjct: 108 ELLSEGRFPAK 118
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -1
Query: 324 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 160
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 168 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 227
Query: 159 Y--EPCYYFKRVYRSLCP 112
+RVYRS+CP
Sbjct: 228 CWGSGDNDCQRVYRSVCP 245
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -1
Query: 324 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 160
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 168 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 227
Query: 159 Y--EPCYYFKRVYRSLCP 112
+RVYRS+CP
Sbjct: 228 CWGSGDNDCQRVYRSVCP 245
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 36.3 bits (80), Expect = 0.007
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -1
Query: 324 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 160
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 219 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 278
Query: 159 Y--EPCYYFKRVYRSLCP 112
+RVYRS+CP
Sbjct: 279 CWGSGDNDCQRVYRSVCP 296
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 31.5 bits (68), Expect = 0.21
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 221 RGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFR 48
RG K +A+K A A S+ + +SAP + + + T+SAP A +P R
Sbjct: 404 RGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEASR 460
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -2
Query: 272 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 93
PTS ++T S + T+T + TST A+ +T+ + +++ + ST+
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTT 356
Query: 92 GTTSAPKAPSP 60
+TS P +P
Sbjct: 357 LSTSIPTTTTP 367
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.1 bits (67), Expect = 0.27
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = -2
Query: 272 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 93
PTS ++T S + T+T + TST A+ +T+ + +++ + ST+
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTT 356
Query: 92 GTTSAPKAPSP 60
+TS P +P
Sbjct: 357 LSTSIPTTTTP 367
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 30.7 bits (66), Expect = 0.36
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -2
Query: 221 RGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFR 48
RG K +A+K A A S+ + +SAP + + + T+SAP A +P R
Sbjct: 382 RGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEASR 438
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.7 bits (66), Expect = 0.36
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -2
Query: 269 TSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSG 90
+SK S S T T T +ST+ + +T H T+S+ +G ++P + S +G
Sbjct: 1406 SSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNSQTG 1465
Query: 89 TTSAPKAPSPVG 54
+T + S G
Sbjct: 1466 STVTMGSSSTSG 1477
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 146 TISRECTGLSAPMSGSTSGTTSAPKAPSP 60
+++ E T S SGS+ GT S +PSP
Sbjct: 658 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 29.5 bits (63), Expect = 0.83
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -2
Query: 278 RPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGS 99
R P+ ST S T R + V ++ +A ++ S +G +A S
Sbjct: 480 RTPSEGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASGPTARRQNS 539
Query: 98 TSGTTSAPKAPSPVG 54
TS TS A +PVG
Sbjct: 540 TSSVTSTTSAKTPVG 554
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 0.83
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 2/92 (2%)
Frame = -2
Query: 272 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 93
PT+ ST + T T T T TST + T + + T + + +T+
Sbjct: 65 PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTT 124
Query: 92 GTTSAPKAPSPV--GFRS*TFPML*FISICFN 3
TT P P+ V G P + FI + +N
Sbjct: 125 TTTMPPCNPNAVSLGMGDANNPQI-FIDVTYN 155
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 29.5 bits (63), Expect = 0.83
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -2
Query: 227 IRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 69
++ G AT+ S ++ T H ++ + LSA + G TSG APKA
Sbjct: 77 VKEGKATRRKEKSIEKKEHEQPKTTHR---KKKSSLSASLEGKTSGENEAPKA 126
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 28.7 bits (61), Expect = 1.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 276 PADLKTAPFDPRFPNQNQTRH-CYQSYVDFHRCQ-KVRGEKYEPCYYFKRVYRSLCPNEW 103
P D P DPR+ N+N+ R+ + Y RCQ + G YF R + N W
Sbjct: 483 PTDYPLGPKDPRY-NENERRYDVWNYYNPLIRCQIYIMGLVLG---YFMRKVPKININPW 538
Query: 102 VDK 94
VD+
Sbjct: 539 VDR 541
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+RP S ST +RR A + A ++ N + AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 101 STSGTTSAPKAP 66
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+RP S ST +RR A + A ++ N + AT R+ T S+P++
Sbjct: 77 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 134
Query: 101 STSGTTSAPKAP 66
+ T S+ AP
Sbjct: 135 NGHTTESSTSAP 146
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+RP S ST +RR A + A ++ N + AT R+ T S+P++
Sbjct: 82 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 139
Query: 101 STSGTTSAPKAP 66
+ T S+ AP
Sbjct: 140 NGHTTESSTSAP 151
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+RP S ST +RR A + A ++ N + AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 101 STSGTTSAPKAP 66
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 28.3 bits (60), Expect = 1.9
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = -2
Query: 272 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS 93
P + + ST T T T TST + T+ +TIS T + P + +T+
Sbjct: 256 PGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTT 315
Query: 92 GTTS 81
+T+
Sbjct: 316 TSTT 319
Score = 27.5 bits (58), Expect = 3.4
Identities = 19/67 (28%), Positives = 25/67 (37%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+R P + +TH SLT + T T T T + T + P S
Sbjct: 237 DRIPLFRTTTTTHSSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTST 296
Query: 101 STSGTTS 81
ST TTS
Sbjct: 297 STISTTS 303
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -2
Query: 281 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
+RP S ST +RR A + A ++ N + AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 101 STSGTTSAPKAP 66
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.5 bits (58), Expect = 3.4
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = -2
Query: 209 TKVTWTSTVARKFAAKNTNHATISRE---CTGLSAPMSGSTSGTTSAPKAPS 63
TKVT TST T AT + E T AP + +T TT+ + P+
Sbjct: 310 TKVTPTSTTTEIPTTTTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLPT 361
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.5 bits (58), Expect = 3.4
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = -2
Query: 251 STHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPM--SGSTSGTTSA 78
+T GS G +T + ST +R + + +T S T S P SGST TTS
Sbjct: 545 TTSGSTQSTTSGPSTS-SGPSTASRSTVSTTSGPSTTSGPST-TSGPSTTSGSTKSTTSG 602
Query: 77 PKAPS 63
P S
Sbjct: 603 PSTTS 607
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 192 FHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDN 85
F+R ++ G YY+ R + + PN + KWDN
Sbjct: 29 FNRFAELDGAGLSHIYYYIRFHEHIAPN--IAKWDN 62
>AF039718-5|AAP68905.1| 760|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform a protein.
Length = 760
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = -2
Query: 164 KNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 27
+ +H+ + ++ + ++ AP APSP F FP L
Sbjct: 699 ETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 744
>AF039718-4|AAP68906.2| 696|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 64,
isoform b protein.
Length = 696
Score = 27.1 bits (57), Expect = 4.5
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = -2
Query: 164 KNTNHATISRECTGLSAPMSGSTSGTTSAPKAPSPVGFRS*TFPML 27
+ +H+ + ++ + ++ AP APSP F FP L
Sbjct: 601 ETNHHSAVEKDAEKIKVRSPPVVVASSPAPAAPSPFSFEETAFPSL 646
>Z81504-1|CAB04116.1| 426|Caenorhabditis elegans Hypothetical
protein F15H9.1 protein.
Length = 426
Score = 26.2 bits (55), Expect = 7.8
Identities = 17/74 (22%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = -2
Query: 275 PPTSKQHLS--THGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSG 102
P TS ++ T ++ R ++ + T + + ++T S + +S+ S
Sbjct: 295 PSTSTLQINHTTGSTVNSTTRMISSTIPSTPNLQINSTTSSIQNSTTSMISSTISSTSSN 354
Query: 101 STSGTTSAPKAPSP 60
STS T + PK +P
Sbjct: 355 STSSTINVPKTAAP 368
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 146 TISRECTGLSAPMSGSTSGTTSAPKAPSP 60
+++ E T S SGS+ GT S +PSP
Sbjct: 451 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 479
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 26.2 bits (55), Expect = 7.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 146 TISRECTGLSAPMSGSTSGTTSAPKAPSP 60
+++ E T S SGS+ GT S +PSP
Sbjct: 658 SVATEVTSQSTVPSGSSLGTQSTNSSPSP 686
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 26.2 bits (55), Expect = 7.8
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -2
Query: 269 TSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGST-- 96
T ST + T+ + T+ T TST + + +T+ + + E T S S ST
Sbjct: 219 TESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTESTTESTSTST 278
Query: 95 -SGTTSAPKAP 66
S TTS P P
Sbjct: 279 DSTTTSLPALP 289
>AC006627-10|AAK85465.1| 499|Caenorhabditis elegans Hypothetical
protein E01A2.8 protein.
Length = 499
Score = 26.2 bits (55), Expect = 7.8
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -1
Query: 117 CPNEWVDKWDNQRAEGTFAGRI*ILNVPNALIYFDLF 7
C + D N +++G AG+ N PN + F+ F
Sbjct: 51 CSSSLNDNQQNTKSDGITAGKSTTQNTPNETVNFNFF 87
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,845,247
Number of Sequences: 27780
Number of extensions: 182202
Number of successful extensions: 666
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 661
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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