Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14e18
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p pro...    29   7.3  
AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize iso...    29   7.3  
AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize iso...    29   7.3  
AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize iso...    29   7.3  
AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-P...    29   7.3  
AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-P...    29   7.3  
AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-P...    29   7.3  
AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-P...    29   7.3  
AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-P...    29   7.3  

>BT025937-1|ABG02181.1|  520|Drosophila melanogaster IP13955p
           protein.
          Length = 520

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457 KMHTLNIKYEIT**YEYPITSVNIRTLW 374
           K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 242 KKHTLNPIFDETMRFHTPISSLESRTLW 269


>AY229971-1|AAP04482.1| 1517|Drosophila melanogaster bitesize isoform
            3 protein.
          Length = 1517

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457  KMHTLNIKYEIT**YEYPITSVNIRTLW 374
            K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 1239 KKHTLNPIFDETMRFHTPISSLESRTLW 1266


>AY229970-1|AAP04481.1| 2645|Drosophila melanogaster bitesize isoform
            2 protein.
          Length = 2645

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457  KMHTLNIKYEIT**YEYPITSVNIRTLW 374
            K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 2367 KKHTLNPIFDETMRFHTPISSLESRTLW 2394


>AY229969-1|AAP04480.1| 1102|Drosophila melanogaster bitesize
           isoform 1 protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457 KMHTLNIKYEIT**YEYPITSVNIRTLW 374
           K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 824 KKHTLNPIFDETMRFHTPISSLESRTLW 851


>AE014298-1343|AAF46505.2| 3687|Drosophila melanogaster CG32702-PA
            protein.
          Length = 3687

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 617  VSCKNNFMEILKRLN-KLKNQTSKPCNKYCDYNLKSSSLGNFRSVLL 480
            V C  +++EI   L  ++ ++ SKP  KYC  ++    L + R ++L
Sbjct: 982  VDCIYDYLEIYDSLGAQVNDERSKPLAKYCGNSVPEDLLSHSRQLVL 1028


>AE014297-1905|AAX52955.1| 1517|Drosophila melanogaster CG33555-PD,
            isoform D protein.
          Length = 1517

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457  KMHTLNIKYEIT**YEYPITSVNIRTLW 374
            K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 1239 KKHTLNPIFDETMRFHTPISSLESRTLW 1266


>AE014297-1904|AAX52954.1| 2645|Drosophila melanogaster CG33555-PC,
            isoform C protein.
          Length = 2645

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457  KMHTLNIKYEIT**YEYPITSVNIRTLW 374
            K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 2367 KKHTLNPIFDETMRFHTPISSLESRTLW 2394


>AE014297-1903|AAX52953.1| 1102|Drosophila melanogaster CG33555-PB,
           isoform B protein.
          Length = 1102

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457 KMHTLNIKYEIT**YEYPITSVNIRTLW 374
           K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 824 KKHTLNPIFDETMRFHTPISSLESRTLW 851


>AE014297-1902|AAX52952.1| 1357|Drosophila melanogaster CG33555-PA,
            isoform A protein.
          Length = 1357

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 457  KMHTLNIKYEIT**YEYPITSVNIRTLW 374
            K HTLN  ++ T  +  PI+S+  RTLW
Sbjct: 1079 KKHTLNPIFDETMRFHTPISSLESRTLW 1106


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,234,151
Number of Sequences: 53049
Number of extensions: 434220
Number of successful extensions: 813
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)