Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14e08
         (696 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p pro...   107   1e-23
AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA...   106   3e-23
AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA ...   100   4e-21
AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p pro...    79   8e-15
AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA...    79   8e-15
AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-P...    49   5e-06

>AY071161-1|AAL48783.1|   89|Drosophila melanogaster RE19842p
           protein.
          Length = 89

 Score =  107 bits (257), Expect = 1e-23
 Identities = 45/70 (64%), Positives = 56/70 (80%)
 Frame = -1

Query: 678 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 499
           +GIICP FA +GPNRG+ Q  LILTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R 
Sbjct: 18  IGIICPFFA-RGPNRGVTQCCLILTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMARE 76

Query: 498 WGNKINNTQA 469
           WGN+I +T A
Sbjct: 77  WGNEIKDTMA 86


>AE014296-3571|AAF51743.2|   89|Drosophila melanogaster CG7625-PA
           protein.
          Length = 89

 Score =  106 bits (254), Expect = 3e-23
 Identities = 44/70 (62%), Positives = 56/70 (80%)
 Frame = -1

Query: 678 VGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRT 499
           +GIICP FA +GPNRG+ Q  L+LTAATCWLFWLC YM Q+NPLIGP+LS   ++ ++R 
Sbjct: 18  IGIICPFFA-RGPNRGVTQCCLMLTAATCWLFWLCCYMTQLNPLIGPKLSMNEIMIMARE 76

Query: 498 WGNKINNTQA 469
           WGN+I +T A
Sbjct: 77  WGNEIKDTMA 86


>AE014296-811|AAF47874.1|   85|Drosophila melanogaster CG1268-PA
           protein.
          Length = 85

 Score = 99.5 bits (237), Expect = 4e-21
 Identities = 41/69 (59%), Positives = 51/69 (73%)
 Frame = -1

Query: 690 LXGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIW 511
           L G VGI  PI  PKGP++ +I+ +L+LTAA CWLFWLC YMAQMNPLIGP+L  + +  
Sbjct: 14  LWGGVGIAMPIMTPKGPHQNLIRCILMLTAACCWLFWLCCYMAQMNPLIGPKLKRDVVAM 73

Query: 510 ISRTWGNKI 484
           I R+W N I
Sbjct: 74  IGRSWNNPI 82


>AY069473-1|AAL39618.1|   84|Drosophila melanogaster LD21410p
           protein.
          Length = 84

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 31/71 (43%), Positives = 46/71 (64%)
 Frame = -1

Query: 696 SILXGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETL 517
           +I    V    PI   K P+  +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+
Sbjct: 11  TIFWAAVAKYGPILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTI 70

Query: 516 IWISRTWGNKI 484
             I+ +WGN I
Sbjct: 71  RIIASSWGNPI 81


>AE014296-786|AAF47856.1|   84|Drosophila melanogaster CG11589-PA
           protein.
          Length = 84

 Score = 78.6 bits (185), Expect = 8e-15
 Identities = 31/71 (43%), Positives = 46/71 (64%)
 Frame = -1

Query: 696 SILXGVVGIICPIFAPKGPNRGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETL 517
           +I    V    PI   K P+  +++ + +LTA  CWLFWLC Y+AQ+NPL+GP+L+  T+
Sbjct: 11  TIFWAAVAKYGPILFTKQPHDDLVRCIFLLTAVVCWLFWLCCYLAQLNPLLGPKLNGNTI 70

Query: 516 IWISRTWGNKI 484
             I+ +WGN I
Sbjct: 71  RIIASSWGNPI 81


>AE014297-2275|AAF55365.1|   88|Drosophila melanogaster CG14909-PA
           protein.
          Length = 88

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -1

Query: 636 RGIIQVVLILTAATCWLFWLCAYMAQMNPLIGPRLSNETLIWISRTWGNKI 484
           RG+I+  +ILTA  C+L W+  ++ Q+NPL GPR   + ++ +   W   I
Sbjct: 31  RGLIRCCVILTAVCCYLAWMVTFVMQLNPLTGPRAKQKIILGMITYWPRSI 81


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,461,936
Number of Sequences: 53049
Number of extensions: 579711
Number of successful extensions: 868
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)