Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14e03
(469 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL009194-2|CAA15701.1| 103|Drosophila melanogaster EG:152A3.7 p... 116 2e-26
AE014298-349|AAF45739.1| 103|Drosophila melanogaster CG3621-PA ... 116 2e-26
AY071663-1|AAL49285.1| 103|Drosophila melanogaster RE75088p pro... 113 1e-25
AY119449-1|AAM50103.1| 145|Drosophila melanogaster AT13913p pro... 86 2e-17
AE014296-3682|AAF51837.1| 145|Drosophila melanogaster CG6914-PA... 86 2e-17
AE014134-2328|AAF53283.3| 708|Drosophila melanogaster CG16970-P... 31 0.59
BT023937-1|ABB36441.1| 968|Drosophila melanogaster RE13936p pro... 29 2.4
AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic g... 29 2.4
AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic g... 29 2.4
AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA... 29 2.4
M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein ( D.me... 28 7.2
J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein ( D.me... 28 7.2
AE014298-2965|AAF45377.1| 738|Drosophila melanogaster CG15322-P... 28 7.2
AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB... 28 7.2
S63761-1|AAB27496.2| 197|Drosophila melanogaster EcR-A protein. 27 9.6
L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein. 27 9.6
AY075461-1|AAL68274.1| 872|Drosophila melanogaster RE16656p pro... 27 9.6
AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p pro... 27 9.6
AY051945-1|AAK93369.1| 531|Drosophila melanogaster LD42037p pro... 27 9.6
AE014297-887|AAF54343.1| 531|Drosophila melanogaster CG8420-PA ... 27 9.6
AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA ... 27 9.6
AE013599-151|AAM68346.1| 849|Drosophila melanogaster CG1765-PE,... 27 9.6
AE013599-150|AAG22334.2| 849|Drosophila melanogaster CG1765-PD,... 27 9.6
AE013599-149|AAF57278.3| 849|Drosophila melanogaster CG1765-PA,... 27 9.6
>AL009194-2|CAA15701.1| 103|Drosophila melanogaster EG:152A3.7
protein.
Length = 103
Score = 116 bits (278), Expect = 2e-26
Identities = 53/98 (54%), Positives = 68/98 (69%)
Frame = -2
Query: 378 RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
RD+SP +Q R FLLGR+H ALRFE ++ RTQP PEIPDGPSH + NYY RD RRE
Sbjct: 6 RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRRE 65
Query: 198 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 85
V PPID+ ++ +++ A K ++ PTPG +YAWD
Sbjct: 66 VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103
>AE014298-349|AAF45739.1| 103|Drosophila melanogaster CG3621-PA
protein.
Length = 103
Score = 116 bits (278), Expect = 2e-26
Identities = 53/98 (54%), Positives = 68/98 (69%)
Frame = -2
Query: 378 RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
RD+SP +Q R FLLGR+H ALRFE ++ RTQP PEIPDGPSH + NYY RD RRE
Sbjct: 6 RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRRE 65
Query: 198 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 85
V PPID+ ++ +++ A K ++ PTPG +YAWD
Sbjct: 66 VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103
>AY071663-1|AAL49285.1| 103|Drosophila melanogaster RE75088p
protein.
Length = 103
Score = 113 bits (271), Expect = 1e-25
Identities = 52/98 (53%), Positives = 67/98 (68%)
Frame = -2
Query: 378 RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
RD+SP +Q R FLLGR+H ALRFE ++ RTQP PEIPDGPSH + NYY RD R E
Sbjct: 6 RDVSPLIQRIRAFLLGREHNLALRFEDGLADRTQPQPEIPDGPSHLLSANYYCQRDGRLE 65
Query: 198 VAPPIDVTKELLSASSDKGAPKQAANVRPTPGHLYAWD 85
V PPID+ ++ +++ A K ++ PTPG +YAWD
Sbjct: 66 VLPPIDLVEQQKQLAAEGEAAKAPSSKLPTPGKVYAWD 103
>AY119449-1|AAM50103.1| 145|Drosophila melanogaster AT13913p
protein.
Length = 145
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/85 (50%), Positives = 52/85 (61%)
Frame = -2
Query: 378 RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
RD++ L RNFLLGR H A RF +VS RTQPPP IP GP+ NYYYTRD RR
Sbjct: 8 RDVAGFLSRVRNFLLGRTHKTAHRFADMVSPRTQPPPNIPSGPTQSLFANYYYTRDPRRL 67
Query: 198 VAPPIDVTKELLSASSDKGAPKQAA 124
V P +DV +E + K ++AA
Sbjct: 68 VKPFVDVVQEHKKMLTAKVKEEEAA 92
>AE014296-3682|AAF51837.1| 145|Drosophila melanogaster CG6914-PA
protein.
Length = 145
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/85 (50%), Positives = 52/85 (61%)
Frame = -2
Query: 378 RDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
RD++ L RNFLLGR H A RF +VS RTQPPP IP GP+ NYYYTRD RR
Sbjct: 8 RDVAGFLSRVRNFLLGRTHKTAHRFADMVSPRTQPPPNIPSGPTQSLFANYYYTRDPRRL 67
Query: 198 VAPPIDVTKELLSASSDKGAPKQAA 124
V P +DV +E + K ++AA
Sbjct: 68 VKPFVDVVQEHKKMLTAKVKEEEAA 92
>AE014134-2328|AAF53283.3| 708|Drosophila melanogaster CG16970-PA
protein.
Length = 708
Score = 31.5 bits (68), Expect = 0.59
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = -2
Query: 339 LLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLS 160
LL T+ PL PPP P PS A +YY++ + R V PP+ T ++
Sbjct: 256 LLASAGTSPGYLPPLAIPAALPPP--PPAPSV--ATDYYFSSRSTRTVPPPVPPTPAAVA 311
Query: 159 ASSDKGA 139
A++ A
Sbjct: 312 AAASASA 318
>BT023937-1|ABB36441.1| 968|Drosophila melanogaster RE13936p
protein.
Length = 968
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 226 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 342
V G L+ GS WDF+RR +G W + ++ +PT +E
Sbjct: 684 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 726
>AJ251887-1|CAB64940.1| 1095|Drosophila melanogaster ionotropic
glutamate receptorsubunit IB protein.
Length = 1095
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 226 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 342
V G L+ GS WDF+RR +G W + ++ +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853
>AJ251886-1|CAB64939.1| 1095|Drosophila melanogaster ionotropic
glutamate receptorsubunit IB protein.
Length = 1095
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 226 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 342
V G L+ GS WDF+RR +G W + ++ +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853
>AE014296-1603|AAF50306.2| 1095|Drosophila melanogaster CG4481-PA
protein.
Length = 1095
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Frame = +1
Query: 226 VVVGMLVRGSVWDFWRR--LGPSRNQW--LKTKSVCMLPTKEE 342
V G L+ GS WDF+RR +G W + ++ +PT +E
Sbjct: 811 VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDE 853
>M20230-1|AAA28721.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCencoded long protein mRNA, complete
cds. ).
Length = 1501
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 291 SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 142
+A PPP +P +++ N +R PP D +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374
>J03131-1|AAA28718.1| 1501|Drosophila melanogaster protein (
D.melanogaster ninaCprotein genes, complete cds. ).
Length = 1501
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 291 SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 142
+A PPP +P +++ N +R PP D +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374
>AE014298-2965|AAF45377.1| 738|Drosophila melanogaster CG15322-PA
protein.
Length = 738
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = -2
Query: 303 EPLVSARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKGAPKQAA 124
+P V A+ PP P PS++ A Y + P I + + + + P+Q+
Sbjct: 369 QPAVYAKVAAPPAPPAPPSYQPAQLIYQPQAQAHHHQPQIQLQLQRIFLQPPQ--PQQST 426
Query: 123 NVRPTPGHLYAW 88
P LYA+
Sbjct: 427 IYAEQPAPLYAY 438
>AE014134-1263|AAF52504.3| 1501|Drosophila melanogaster CG5125-PB,
isoform B protein.
Length = 1501
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = -2
Query: 291 SARTQPPPEIPDGPSHKHAHNYYYTRDARREVAPPIDVTKELLSASSDKG 142
+A PPP +P +++ N +R PP D +EL + + ++G
Sbjct: 1325 AAPPPPPPPMPSSNYYRNNPNQQQRNYQQRSSYPPSDPVRELQNMARNEG 1374
>S63761-1|AAB27496.2| 197|Drosophila melanogaster EcR-A protein.
Length = 197
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 192 PPIDVTKELLSASSDKGAPKQAANVRPTPG 103
P +DVT++ +S S P A + P+PG
Sbjct: 138 PRLDVTEDWMSTPSPGSVPSSAPPLSPSPG 167
>L14768-1|AAB39774.1| 1429|Drosophila melanogaster expanded protein.
Length = 1429
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 300 PLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
P S QPPP P P+H H ++ Y R+ R+
Sbjct: 1003 PPPSLPRQPPP--PPPPNHPHLASHLYEREMARK 1034
>AY075461-1|AAL68274.1| 872|Drosophila melanogaster RE16656p
protein.
Length = 872
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 192 PPIDVTKELLSASSDKGAPKQAANVRPTPG 103
P +DVT++ +S S P A + P+PG
Sbjct: 138 PRLDVTEDWMSTPSPGSVPSSAPPLSPSPG 167
>AY069068-1|AAL39213.1| 1427|Drosophila melanogaster GH08582p protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 300 PLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
P S QPPP P P+H H ++ Y R+ R+
Sbjct: 1003 PPPSLPRQPPP--PPPPNHPHLASHLYEREMARK 1034
>AY051945-1|AAK93369.1| 531|Drosophila melanogaster LD42037p
protein.
Length = 531
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = -2
Query: 402 MVKAKVPLRDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYY 223
+ +V LR A F L + + F+P ++P I + H H+
Sbjct: 296 LANPEVYLRYFQTAQIMFNGLLKSQGYPKQTHFDP-----SRPGETISNLLDHVAKHHLN 350
Query: 222 YTRDARREVAPPIDVTKELLSASSDKG 142
D+R+ V P + KELL +G
Sbjct: 351 VKIDSRQYVKPAVGYAKELLKLGQARG 377
>AE014297-887|AAF54343.1| 531|Drosophila melanogaster CG8420-PA
protein.
Length = 531
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/87 (24%), Positives = 34/87 (39%)
Frame = -2
Query: 402 MVKAKVPLRDISPALQAFRNFLLGRKHTNALRFEPLVSARTQPPPEIPDGPSHKHAHNYY 223
+ +V LR A F L + + F+P ++P I + H H+
Sbjct: 296 LANPEVYLRYFQTAQIMFNGLLKSQGYPKQTHFDP-----SRPGETISNLLDHVAKHHLN 350
Query: 222 YTRDARREVAPPIDVTKELLSASSDKG 142
D+R+ V P + KELL +G
Sbjct: 351 VKIDSRQYVKPAVGYAKELLKLGQARG 377
>AE014134-106|AAF51495.1| 1427|Drosophila melanogaster CG4114-PA
protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 300 PLVSARTQPPPEIPDGPSHKHAHNYYYTRDARRE 199
P S QPPP P P+H H ++ Y R+ R+
Sbjct: 1003 PPPSLPRQPPP--PPPPNHPHLASHLYEREMARK 1034
>AE013599-151|AAM68346.1| 849|Drosophila melanogaster CG1765-PE,
isoform E protein.
Length = 849
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 192 PPIDVTKELLSASSDKGAPKQAANVRPTPG 103
P +DVT++ +S S P A + P+PG
Sbjct: 138 PRLDVTEDWMSTPSPGSVPSSAPPLSPSPG 167
>AE013599-150|AAG22334.2| 849|Drosophila melanogaster CG1765-PD,
isoform D protein.
Length = 849
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 192 PPIDVTKELLSASSDKGAPKQAANVRPTPG 103
P +DVT++ +S S P A + P+PG
Sbjct: 138 PRLDVTEDWMSTPSPGSVPSSAPPLSPSPG 167
>AE013599-149|AAF57278.3| 849|Drosophila melanogaster CG1765-PA,
isoform A protein.
Length = 849
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 192 PPIDVTKELLSASSDKGAPKQAANVRPTPG 103
P +DVT++ +S S P A + P+PG
Sbjct: 138 PRLDVTEDWMSTPSPGSVPSSAPPLSPSPG 167
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,693,542
Number of Sequences: 53049
Number of extensions: 445207
Number of successful extensions: 1538
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1531
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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