Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14d23
(807 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein. 38 0.056
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 34 0.53
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 34 0.69
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 34 0.69
X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for ... 33 0.92
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 33 0.92
BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1 ... 33 0.92
BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein. 33 0.92
BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein. 33 0.92
BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein. 33 0.92
AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein. 33 0.92
AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2, tr... 33 0.92
AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2, tr... 33 0.92
AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2, tr... 33 0.92
AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2, tr... 33 0.92
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 33 1.2
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 33 1.2
AF147791-1|AAD55679.1| 957|Homo sapiens mucin 11 protein. 33 1.2
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 32 2.1
AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ... 32 2.1
AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein. 32 2.1
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 32 2.1
BC117674-1|AAI17675.2| 1240|Homo sapiens NFASC protein protein. 32 2.8
AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B ... 32 2.8
AL391822-5|CAI14660.1| 1347|Homo sapiens neurofascin homolog (ch... 32 2.8
AL391822-3|CAI14659.1| 1240|Homo sapiens neurofascin homolog (ch... 32 2.8
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 3.7
BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open readi... 31 4.9
BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open readi... 31 4.9
AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open readi... 31 4.9
AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open readi... 31 4.9
AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein. 31 4.9
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 31 6.5
AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein. 30 8.6
>AF007191-1|AAC02269.1| 589|Homo sapiens intestinal mucin protein.
Length = 589
Score = 37.5 bits (83), Expect = 0.056
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Frame = +1
Query: 373 TNASSLITSVALA-PVEDSIGSFTTTAGAATIVLEPTD--TSSLITSV-ALAPVEDSITS 540
T L T VA V+ ++ S T T T + TD T SL+T++ + + +ITS
Sbjct: 327 TTMEPLSTIVATTGTVKTTVTSSTATFRETTTLTSTTDISTESLMTAMTSTTRLTSAITS 386
Query: 541 FTTTAGAATIVLEPTDTSSL------ITSVALAPVEDSITSFTT 654
TT T PT S+L I S L P D ITS TT
Sbjct: 387 KTTLTSLKTTASRPTANSTLSSLTSSILSSTLVPSTDMITSHTT 430
Score = 30.7 bits (66), Expect = 6.5
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 573
TS E + TTT+ + +EP T T V+ ++TS T T T +
Sbjct: 304 TSTLHTTAESTPSCTTTTSFITSTTMEPLSTIVATTGT----VKTTVTSSTATFRETTTL 359
Query: 574 LEPTD--TSSLITSV-ALAPVEDSITSFTT 654
TD T SL+T++ + + +ITS TT
Sbjct: 360 TSTTDISTESLMTAMTSTTRLTSAITSKTT 389
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 34.3 bits (75), Expect = 0.53
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLI--TSVALAPVEDSITSFTTTAGAAT 567
TS + + + TT+A +I P T S + TS AP TS T+ A +T
Sbjct: 13 TSTPTSSTTSTPQTSTTSASTTSITSGPGTTPSPVPTTSTTSAPT----TSTTSAATTST 68
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSF--TTPGRXCNNSFWNPPXTSS 705
I T T+S T+ + S TS TTP S +PP TS+
Sbjct: 69 ISAPTTSTTSAPTTSTTSASTASKTSGLGTTPSPIPTTSTTSPPTTST 116
Score = 32.7 bits (71), Expect = 1.6
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Frame = +1
Query: 373 TNASSLITSVALAPVEDSIGS---FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITS- 540
+ S+ TS AP +I + TT+A A+ PT TSS T+ + S TS
Sbjct: 703 STTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSA 762
Query: 541 -FTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 654
T+T A T T +S I+S + TS T+
Sbjct: 763 PITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTTS 801
Score = 32.7 bits (71), Expect = 1.6
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +1
Query: 382 SSLITSVALAPVEDSIGSFTTTAGAATI--VLEPTD--TSSLITSVALAPVEDSI-TSFT 546
S+ TS AP + + T+T+ A T PT TS+ ITS AP + T T
Sbjct: 722 SAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTISAPTTSTTSTPQT 781
Query: 547 TTAGAATIVLEPTD----TSSLITSVALAPVEDSITSFTT 654
+T + T PT TSS TS AP + ++ TT
Sbjct: 782 STISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTT 821
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 33.9 bits (74), Expect = 0.69
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +1
Query: 442 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALA 621
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSI--- 811
Query: 622 PVEDSITSFTTP 657
PV SIT T+P
Sbjct: 812 PV--SITPVTSP 821
Score = 33.5 bits (73), Expect = 0.92
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +1
Query: 376 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 555
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 556 GAATIVLEPTDTSSLITS---VALAPVEDSITSFTT 654
A+T+ P D++S +T+ V+ +P TS T
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPT 857
Score = 33.5 bits (73), Expect = 0.92
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -2
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 382 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 546
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 547 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 651
+T +V TS S+A P D+ T+FT
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 3907
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 567
TS + ++ S TT G + + P+D S+ +TS+ ++ PV S S +T T
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSFTT 654
+ P TS T + +P +TS T
Sbjct: 2779 SI--PVTTS---TEASSSPTTAEVTSMPT 2802
Score = 30.7 bits (66), Expect = 6.5
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +1
Query: 439 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVAL 618
T T +T V+EP S T+ + +E S+TS T G ++ + PT++ + S +
Sbjct: 67 TATGTTSTNVVEPRMYLSCSTNPEMTSIESSVTS--DTPGVSSTRMTPTESRTTSESTS- 123
Query: 619 APVEDSITSFTTP 657
DS T F +P
Sbjct: 124 ----DSTTLFPSP 132
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 567
TS+ + ++ S TT + + P++ S+ +TS+ ++ PV S S +T T
Sbjct: 2601 TSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDT 2660
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSFTTPG 660
L T T TS + E S +TPG
Sbjct: 2661 RTLVTTSTG---TSSSPTTAEGSSMPTSTPG 2688
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 585
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 586 DTSSLITSVALA--PVEDSITS 645
D S+ +TS+ ++ PV S S
Sbjct: 2748 DGSTPLTSILVSTLPVASSEAS 2769
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 33.9 bits (74), Expect = 0.69
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +1
Query: 442 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVALA 621
T++ A+T+ P DTS+ IT+ ++ S TTT G + + P++ S L+TS+
Sbjct: 760 TSSEASTLSTTPLDTSTHITTST-----EASCSPTTTEGTSMPISTPSEGSPLLTSI--- 811
Query: 622 PVEDSITSFTTP 657
PV SIT T+P
Sbjct: 812 PV--SITPVTSP 821
Score = 33.5 bits (73), Expect = 0.92
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Frame = +1
Query: 376 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTA 555
+ + L TS + ++ S TTT G + + P++ S L+TS+ PV SIT T+
Sbjct: 768 STTPLDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLLTSI---PV--SITP-VTSP 821
Query: 556 GAATIVLEPTDTSSLITS---VALAPVEDSITSFTT 654
A+T+ P D++S +T+ V+ +P TS T
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPT 857
Score = 33.5 bits (73), Expect = 0.92
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -2
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 3348 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 3406
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 3407 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 3466
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 3467 TTPVASSEASTLSTTPVDTSTPVTTSSPT 3495
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 382 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 546
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 3813 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 3872
Query: 547 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 651
+T +V TS S+A P D+ T+FT
Sbjct: 3873 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 3907
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 567
TS + ++ S TT G + + P+D S+ +TS+ ++ PV S S +T T
Sbjct: 2719 TSTPVTTSAEASSSPTTAEGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDT 2778
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSFTT 654
+ P TS T + +P +TS T
Sbjct: 2779 SI--PVTTS---TEASSSPTTAEVTSMPT 2802
Score = 30.7 bits (66), Expect = 6.5
Identities = 22/73 (30%), Positives = 36/73 (49%)
Frame = +1
Query: 439 TTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSVAL 618
T T +T V+EP S T+ + +E S+TS T G ++ + PT++ + S +
Sbjct: 67 TATGTTSTNVVEPRMYLSCSTNPEMTSIESSVTS--DTPGVSSTRMTPTESRTTSESTS- 123
Query: 619 APVEDSITSFTTP 657
DS T F +P
Sbjct: 124 ----DSTTLFPSP 132
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALA--PVEDSITSFTTTAGAAT 567
TS+ + ++ S TT + + P++ S+ +TS+ ++ PV S S +T T
Sbjct: 2601 TSIPVTTSTETSSSPTTAKDTSMPISTPSEVSTSLTSILVSTMPVASSEASTLSTTPVDT 2660
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSFTTPG 660
L T T TS + E S +TPG
Sbjct: 2661 RTLVTTSTG---TSSSPTTAEGSSMPTSTPG 2688
Score = 30.7 bits (66), Expect = 6.5
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAG--AATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPT 585
P+ + + S T A A+T+ P DTS+ +T+ A ++ +S TT G + + P+
Sbjct: 2693 PLTNILVSTTLLANSEASTLSTTPVDTSTPVTTSA-----EASSSPTTAEGTSMRISTPS 2747
Query: 586 DTSSLITSVALA--PVEDSITS 645
D S+ +TS+ ++ PV S S
Sbjct: 2748 DGSTPLTSILVSTLPVASSEAS 2769
>X13403-1|CAA31767.1| 743|Homo sapiens protein ( Human mRNA for
octamer-binding protein Oct-1. ).
Length = 743
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 33.5 bits (73), Expect = 0.92
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Frame = -2
Query: 617 SATEVINDEVSVGSKTIV--AAPAVVVNDVIESSTGASATEVINDEVSVGSKTIVAAPAV 444
S T V++ E S S T V + P + S T A T + S G+ + + P V
Sbjct: 79 STTPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMP-V 137
Query: 443 VVNDPIESSTGASATEVINDEALVSSKXXXXXXXXXXXXXXXXXVLNTEAP-----QDLS 279
+ S +T ++ LV++ +E LS
Sbjct: 138 STTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLS 197
Query: 278 TKILADAVPEAVIVTAPEAETAITTGSPT 192
T +A + + T + T +TT SPT
Sbjct: 198 TTPVASSEASTLSTTPVDTSTPVTTSSPT 226
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 382 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 546
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 544 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 603
Query: 547 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 651
+T +V TS S+A P D+ T+FT
Sbjct: 604 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 638
>BC052274-1|AAH52274.1| 743|Homo sapiens POU class 2 homeobox 1
protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC007388-1|AAH07388.1| 561|Homo sapiens POU2F1 protein protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 613 ALAP 624
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>BC003571-1|AAH03571.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>BC001664-1|AAH01664.1| 743|Homo sapiens POU2F1 protein protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AY113189-1|AAM77920.1| 755|Homo sapiens OCT-1 protein protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 613 ALAP 624
+L+P
Sbjct: 535 SLSP 538
Score = 30.3 bits (65), Expect = 8.6
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAA-T 567
+TS A+ + + S TT+ AT++ SS +TS +L+P + S + + A+ T
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASET 555
Query: 568 IVLEPTDT 591
++ T T
Sbjct: 556 STIQTTST 563
>AL136984-5|CAI15171.1| 561|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 561
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 374 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 430
Query: 613 ALAP 624
+L+P
Sbjct: 431 SLSP 434
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 392 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 450
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 451 TSTTQTTSTPLSS 463
>AL136984-4|CAI15170.1| 741|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 741
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 464 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 520
Query: 613 ALAP 624
+L+P
Sbjct: 521 SLSP 524
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 482 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 540
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 541 TSTTQTTSTPLSS 553
>AL136984-3|CAI15169.1| 743|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 743
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 466 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 522
Query: 613 ALAP 624
+L+P
Sbjct: 523 SLSP 526
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 484 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 542
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 543 TSTTQTTSTPLSS 555
>AL136984-1|CAI15167.1| 755|Homo sapiens POU domain, class 2,
transcription factor 1 protein.
Length = 755
Score = 33.5 bits (73), Expect = 0.92
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 433 SFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLITSV 612
S T++ A T+ + P +TS A+ + + TS TT+ AT++ SS +TS
Sbjct: 478 SLVTSSAATTLTVSPVLP---LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSP 534
Query: 613 ALAP 624
+L+P
Sbjct: 535 SLSP 538
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +1
Query: 391 ITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATI 570
+TS A+ + + S TT+ AT++ SS +TS +L+P S ++ T+ A +A+
Sbjct: 496 LTSAAVTNLSVTGTSDTTSNNTATVISTAPPASSAVTSPSLSP-SPSASASTSEASSASE 554
Query: 571 VLEPTDTSSLITS 609
TS+ ++S
Sbjct: 555 TSTTQTTSTPLSS 567
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
V P+ ++ + TT + T+ PT T+ +T+V V +++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 580 PT---DTSSLITSVALAPVEDSITSFTTP 657
T T++ I + PV ++++F P
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTFVPP 214
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 33.1 bits (72), Expect = 1.2
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
V P+ ++ + TT + T+ PT T+ +T+V V +++ TTT T+ +
Sbjct: 129 VTTTPIVTTVPTVTTVRTSTTV---PTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVS 185
Query: 580 PT---DTSSLITSVALAPVEDSITSFTTP 657
T T++ I + PV ++++F P
Sbjct: 186 TTTSVPTTTSIPTTTSVPVTTTVSTFVPP 214
>AF147791-1|AAD55679.1| 957|Homo sapiens mucin 11 protein.
Length = 957
Score = 33.1 bits (72), Expect = 1.2
Identities = 27/111 (24%), Positives = 47/111 (42%)
Frame = +1
Query: 379 ASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAG 558
+SS T L+P + + + + T+T++L S + + T+F T+
Sbjct: 747 SSSGSTGTTLSPARSTTSGLVGESTPSRLSPSSTETTTLPGSPTTPSLSEKSTTFYTSPR 806
Query: 559 AATIVLEPTDTSSLITSVALAPVEDSITSFTTPGRXCNNSFWNPPXTSSLN 711
+ L P T+S S E+S TS + PG +F + TS L+
Sbjct: 807 SPDATLSPATTTSSGVS------EESSTSHSQPGSTHTTAFPDSTTTSGLS 851
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 382 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 546
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 547 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 651
+T +V TS S+A P D+ T+FT
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 443
>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
marker CA125 protein.
Length = 22152
Score = 32.3 bits (70), Expect = 2.1
Identities = 34/103 (33%), Positives = 43/103 (41%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 573
TS + S+G TT AT T TS+L +V+ A S S TT T+
Sbjct: 11860 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSGLSSASITTDK-PQTVT 11918
Query: 574 LEPTDTSSLITSVALAPVEDSITSFTTPGRXCNNSFWNPPXTS 702
T+TS +TSV P E S T T + PP TS
Sbjct: 11919 SWNTETSPSVTSV--GPPEFSRTVTGTTMTLIPSEMPTPPKTS 11959
Score = 31.9 bits (69), Expect = 2.8
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +1
Query: 373 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTT 552
T+++S++TSV S+GS T + P + + + + P T+FT
Sbjct: 2490 TSSNSVVTSVPAPGTWASVGSTTDLPAMGFLKTSPAGEAHSLLASTIEPA----TAFTPH 2545
Query: 553 AGAATIV-LEPTDTSSLITSVALAPVEDSITSFTTPGRXCN 672
AA + T +SL+T+ + S + TTP N
Sbjct: 2546 LSAAVVTGSSATSEASLLTTSESKAIHSSPQTPTTPTSGAN 2586
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 582
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 11702 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 11761
Query: 583 TDTSS 597
T T S
Sbjct: 11762 TLTHS 11766
>AF361486-1|AAK74120.3| 6995|Homo sapiens mucin 16 protein.
Length = 6995
Score = 32.3 bits (70), Expect = 2.1
Identities = 34/103 (33%), Positives = 43/103 (41%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 573
TS + S+G TT AT T TS+L +V+ A S S TT T+
Sbjct: 3564 TSTMIPTSTLSLGLLETTGLLATSSSAETSTSTLTLTVSPAVSGLSSASITTDK-PQTVT 3622
Query: 574 LEPTDTSSLITSVALAPVEDSITSFTTPGRXCNNSFWNPPXTS 702
T+TS +TSV P E S T T + PP TS
Sbjct: 3623 SWNTETSPSVTSV--GPPEFSRTVTGTTMTLIPSEMPTPPKTS 3663
Score = 31.1 bits (67), Expect = 4.9
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 412 PVEDSIGSFTTTAGAATIVLEP---TDTSSLITSVALAPVEDSITSFTTTAGAATIVLEP 582
PV + SF+ ++ AT V+ T+ SS + + + +TS T++GAAT P
Sbjct: 3406 PVSRTTSSFSHSSPDATPVMATSPRTEASSAVLTTISPGAPEMVTSQITSSGAATSTTVP 3465
Query: 583 TDTSS 597
T T S
Sbjct: 3466 TLTHS 3470
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 32.3 bits (70), Expect = 2.1
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +1
Query: 382 SSLITSVALAPVE----DSIGSFTTTAG-AATIVLEPTDTSSLITSVALAPVEDSITSFT 546
S+L+T+V ++P+ + +T G +T +L T S + + SITS
Sbjct: 349 STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGSFSIPAEVTTIRISITSER 408
Query: 547 TTAGAATIVLEPTDTSSLITSVALAPVEDSITSFT 651
+T +V TS S+A P D+ T+FT
Sbjct: 409 STPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFT 443
>BC117674-1|AAI17675.2| 1240|Homo sapiens NFASC protein protein.
Length = 1240
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +1
Query: 424 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 603
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 942 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1001
Query: 604 TSVALAPVEDSITSFTT-PGRXCNNSFW 684
AP E SI + T P N W
Sbjct: 1002 KIHESAPDEQSIWNVTVLPNSKWANITW 1029
>AY307931-1|AAQ73825.1| 336|Homo sapiens intestinal mucin MUC3B
precursor protein.
Length = 336
Score = 31.9 bits (69), Expect = 2.8
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Frame = +1
Query: 373 TNASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSL--ITSVAL----APVEDSI 534
T + +TS + P+ +I S T T PT T++L +TS L AP + I
Sbjct: 248 TTLKTAVTSTS--PITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSILSSTPAPNTEVI 305
Query: 535 TSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTT 654
TS TTT T S+L+T++ A + TS TT
Sbjct: 306 TSHTTTT---------TPPSTLVTTLPTAIARSTPTSETT 336
Score = 31.1 bits (67), Expect = 4.9
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Frame = +1
Query: 451 GAATIVLEPTDT-SSLITSV-ALAPVEDSITSFTTTAGAATIVLEPTDTSSL--ITSVAL 618
G+ + PT ++L T+V + +P+ +ITS T T PT T++L +TS L
Sbjct: 235 GSIHTTMSPTPVFTTLKTAVTSTSPITSTITSTNTVTSMTTTTSRPTATNTLSSLTSSIL 294
Query: 619 ----APVEDSITSFTT 654
AP + ITS TT
Sbjct: 295 SSTPAPNTEVITSHTT 310
>AL391822-5|CAI14660.1| 1347|Homo sapiens neurofascin homolog
(chicken) protein.
Length = 1347
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +1
Query: 424 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 603
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 1049 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1108
Query: 604 TSVALAPVEDSITSFTT-PGRXCNNSFW 684
AP E SI + T P N W
Sbjct: 1109 KIHESAPDEQSIWNVTVLPNSKWANITW 1136
>AL391822-3|CAI14659.1| 1240|Homo sapiens neurofascin homolog
(chicken) protein.
Length = 1240
Score = 31.9 bits (69), Expect = 2.8
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 1/88 (1%)
Frame = +1
Query: 424 SIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLEPTDTSSLI 603
++ S TA AAT + +A T+ TTTA A T P T+S
Sbjct: 942 AVSSTDATAIAATTEATTVPIIPTVAPTTIATTTTVATTTTTTAAATTTTESPPTTTSGT 1001
Query: 604 TSVALAPVEDSITSFTT-PGRXCNNSFW 684
AP E SI + T P N W
Sbjct: 1002 KIHESAPDEQSIWNVTVLPNSKWANITW 1029
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.5 bits (68), Expect = 3.7
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +1
Query: 382 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 561
+ L T+ S + ++T G I+ EP+ T+++ AP + T+ +T A A
Sbjct: 3038 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATV-----TAPPGSTATASSTQATA 3092
Query: 562 ATIVLEPTDTSSLITSVALAPVEDSITSFTTP 657
T + T T+ +TS P T+ P
Sbjct: 3093 GTPHVSTTATTPTVTSSKATPSSSPGTATALP 3124
>BC105737-1|AAI05738.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.9
Identities = 38/142 (26%), Positives = 59/142 (41%)
Frame = +1
Query: 220 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 399
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 580 PTDTSSLITSVALAPVEDSITS 645
+ T S S A E S TS
Sbjct: 379 ESSTVSSGASTATTS-ESSTTS 399
>BC105735-1|AAI05736.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.9
Identities = 38/142 (26%), Positives = 59/142 (41%)
Frame = +1
Query: 220 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 399
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 580 PTDTSSLITSVALAPVEDSITS 645
+ T S S A E S TS
Sbjct: 379 ESSTVSSGASTATTS-ESSTTS 399
>AL669830-8|CAI18008.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.9
Identities = 38/142 (26%), Positives = 59/142 (41%)
Frame = +1
Query: 220 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 399
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 580 PTDTSSLITSVALAPVEDSITS 645
+ T S S A E S TS
Sbjct: 379 ESSTVSSGASTATTS-ESSTTS 399
>AL663093-1|CAI17705.1| 566|Homo sapiens chromosome 6 open reading
frame 205 protein.
Length = 566
Score = 31.1 bits (67), Expect = 4.9
Identities = 38/142 (26%), Positives = 59/142 (41%)
Frame = +1
Query: 220 SASGAVTITASGTASARIFVLKSCGASVFKXXXXXXXXXXXXXXXXXXLELTNASSLITS 399
S +G T + S T S+ I + + +S TN+ S TS
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTS 324
Query: 400 VALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIVLE 579
+ +S S TT++GA+T T++ S TS + +S +S TT++G +T
Sbjct: 325 SGASTATNSESS-TTSSGAST----ATNSESSTTSSGASTATNSGSS-TTSSGTSTATNS 378
Query: 580 PTDTSSLITSVALAPVEDSITS 645
+ T S S A E S TS
Sbjct: 379 ESSTVSSGASTATTS-ESSTTS 399
>AF007192-1|AAC02270.1| 338|Homo sapiens intestinal mucin protein.
Length = 338
Score = 31.1 bits (67), Expect = 4.9
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSF--TTTAGAAT 567
TS E + TTT+ + +E +S TS S +F TTT T
Sbjct: 84 TSTLHTTAESTTAHTTTTSFTTSTTMESPSSSVATTSTGQTTFSSSTATFTETTTLTPTT 143
Query: 568 IVLEPTDTSSLITSVALAPVEDSITSFTTPGRXCNNSFWNPPXTSSLN 711
E T T+++ ++ P+ SIT T + W P T++L+
Sbjct: 144 DFSEETLTTAMTST---PPITSSITPTNTVTSMTTMTSW-PTATNTLS 187
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.7 bits (66), Expect = 6.5
Identities = 22/92 (23%), Positives = 39/92 (42%)
Frame = +1
Query: 382 SSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGA 561
+ L T+ S + ++T G I+ EP+ T+++ P + T+ +T A A
Sbjct: 253 TELTTTATTTASTGSTATLSSTPGTTWILTEPSTTATV-----TVPTGSTATASSTQATA 307
Query: 562 ATIVLEPTDTSSLITSVALAPVEDSITSFTTP 657
T + T T+ +TS P T+ P
Sbjct: 308 GTPHVSTTATTPTVTSSKATPSSSPGTATALP 339
>AF007190-1|AAC02268.1| 513|Homo sapiens intestinal mucin protein.
Length = 513
Score = 30.3 bits (65), Expect = 8.6
Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Frame = +1
Query: 394 TSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVALAPVEDSITSFTTTAGAATIV 573
T+ E ++ TTT+ + +EP T+ T S +F T T +
Sbjct: 309 TNTIHTTAESALAPTTTTSFTTSPTMEPPSTTVATTGTGQTTFPSSTATFLET----TTL 364
Query: 574 LEPTD--TSSLITSV-ALAPVEDSITSFTTPGRXCNNSFWNPPXTSSLN 711
TD T SL T++ + P+ SIT T + W P T++L+
Sbjct: 365 TPTTDFSTESLTTAMTSTPPITSSITPTDTMTSMRTTTSW-PTATNTLS 412
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,102,094
Number of Sequences: 237096
Number of extensions: 1722825
Number of successful extensions: 4189
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4117
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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