Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14d21
         (580 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1196|AAF54554.2|  614|Drosophila melanogaster CG6547-PA...   143   1e-34
AE014297-2946|AAF55862.2|  428|Drosophila melanogaster CG5810-PA...    31   1.1  
AY089692-1|AAL90430.1|  385|Drosophila melanogaster RH69521p pro...    30   2.0  
AE014296-3792|ABI31278.1|  210|Drosophila melanogaster CG40057-P...    30   2.0  
AE014134-3035|AAG22440.2|  385|Drosophila melanogaster CG17572-P...    30   2.0  
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    29   4.5  
AY051483-1|AAK92907.1|  684|Drosophila melanogaster GH14368p pro...    28   7.9  
AE014296-3793|EAA46078.1|  156|Drosophila melanogaster CG40057-P...    28   7.9  
AE014296-433|AAF47628.1|  684|Drosophila melanogaster CG5714-PA ...    28   7.9  
AE014134-1503|AAF52673.1|  442|Drosophila melanogaster CG13398-P...    28   7.9  

>AE014297-1196|AAF54554.2|  614|Drosophila melanogaster CG6547-PA
           protein.
          Length = 614

 Score =  143 bits (347), Expect = 1e-34
 Identities = 63/139 (45%), Positives = 90/139 (64%)
 Frame = -3

Query: 494 EIPSLYPVKHTITMPHNHFYNNTSQYPFKQKVQVKHPHTTWLHFNRTEVKNIYGEPVTQN 315
           ++P LYP+K TI++P  H Y   + YP +  +   HPHT +  FN+ +VKN +G  VT +
Sbjct: 243 DLPDLYPMKSTISIPKYHIYQAKNLYPLRSDITCSHPHTIFTVFNKHQVKNSHGSEVTTS 302

Query: 314 QILGRSLTHAFNVASSYAKQMHGEDVKDLPEPIFVNCIQTDGQLYHFGVLQLNTLNVDGN 135
           Q+  R+L  AF VA++ AKQ+HG+ V  LP+PI V  +QTDG+ +HFGVLQLNTL++  N
Sbjct: 303 QLQARTLVKAFVVAAARAKQLHGDSVGALPKPIVVQSVQTDGRTFHFGVLQLNTLDLGAN 362

Query: 134 EGIKNVWYCKNNMKLYDSS 78
              KN W+ + N  L   S
Sbjct: 363 STAKNYWFHRQNYNLQKQS 381


>AE014297-2946|AAF55862.2|  428|Drosophila melanogaster CG5810-PA
           protein.
          Length = 428

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/62 (24%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -3

Query: 254 MHGEDVKDLPEPIFVNCIQ-TDGQLYHFGVLQLNTLNVDGNEGIKNVWYCKNNMKLYDSS 78
           +H  D+ +LP  IF+N  Q  +  +    + Q+ ++  DG + +K + +  N +++ DS+
Sbjct: 70  LHSSDLANLPRKIFLNLPQLVEFHVLECELQQIESVCFDGAKNLKRLNFGGNALRVLDSN 129

Query: 77  RY 72
            +
Sbjct: 130 TF 131


>AY089692-1|AAL90430.1|  385|Drosophila melanogaster RH69521p
           protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 512 KDIPFVEIPSLYPVKHTI---TMPHNHFYNNTSQYPFKQKVQVKHPHT 378
           +++P+V  PS    K+ +   ++   HFY     YPF  ++  KH +T
Sbjct: 106 EELPYVCCPSSPLEKNQVCGKSLVQGHFYKGLGSYPFVARIGFKHVNT 153


>AE014296-3792|ABI31278.1|  210|Drosophila melanogaster CG40057-PB,
           isoform B protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
 Frame = -3

Query: 299 SLTHAFNVASSYAKQMHGEDVKDLPEPIFVNCIQTDGQLYHFGVLQ------LNTLNVDG 138
           +L + F++A + A  M    +++  E   + C + D +L++FG+L       ++  N   
Sbjct: 78  NLDNIFDIAHANAMDMMS--IEEKKERFQITCAKIDQKLFNFGILNDYVATLIDPSNWHD 135

Query: 137 NEGIKNVWYCKNNMKLYDSSRYFSGMPVLENYNNKV 30
           +E  KN       +K+ +      G+ ++++YN K+
Sbjct: 136 HEDFKNAVEIVRKLKVVNDIAE-RGVKLMQDYNKKL 170


>AE014134-3035|AAG22440.2|  385|Drosophila melanogaster CG17572-PA
           protein.
          Length = 385

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = -3

Query: 512 KDIPFVEIPSLYPVKHTI---TMPHNHFYNNTSQYPFKQKVQVKHPHT 378
           +++P+V  PS    K+ +   ++   HFY     YPF  ++  KH +T
Sbjct: 106 EELPYVCCPSSPLEKNQVCGKSLVQGHFYKGLGSYPFVARIGFKHVNT 153


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
 Frame = -3

Query: 485 SLYPVKHTITMP---HNHFYNNTSQYPFKQKVQVKHPHTTWLHFNRTEVKNIYGEPVTQ 318
           S+ P K T   P   H   +N  +  P  Q  Q  H     +H+  TE   I GEP T+
Sbjct: 467 SIAPAKTTAIPPALHHQKLHNKPANRPLSQ--QHNHGLGRPVHYTTTESSKIVGEPQTE 523


>AY051483-1|AAK92907.1|  684|Drosophila melanogaster GH14368p
           protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 320 QNQILGRSLTHAFNVASSYAKQMHGEDVKDLP 225
           + Q+LG  L     + ++ AK++ G+ ++DLP
Sbjct: 320 KEQLLGLKLASGLEILATQAKRVEGQQLEDLP 351


>AE014296-3793|EAA46078.1|  156|Drosophila melanogaster CG40057-PA,
           isoform A protein.
          Length = 156

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/69 (21%), Positives = 35/69 (50%)
 Frame = -3

Query: 299 SLTHAFNVASSYAKQMHGEDVKDLPEPIFVNCIQTDGQLYHFGVLQLNTLNVDGNEGIKN 120
           +L + F++A + A  M    +++  E   + C + D +L++FG+L         N+  + 
Sbjct: 78  NLDNIFDIAHANAMDMMS--IEEKKERFQITCAKIDQKLFNFGILNDYVATRINNKKNQI 135

Query: 119 VWYCKNNMK 93
           + +C+  +K
Sbjct: 136 IEFCRCELK 144


>AE014296-433|AAF47628.1|  684|Drosophila melanogaster CG5714-PA
           protein.
          Length = 684

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 10/32 (31%), Positives = 20/32 (62%)
 Frame = -3

Query: 320 QNQILGRSLTHAFNVASSYAKQMHGEDVKDLP 225
           + Q+LG  L     + ++ AK++ G+ ++DLP
Sbjct: 320 KEQLLGLKLASGLEILATQAKRVEGQQLEDLP 351


>AE014134-1503|AAF52673.1|  442|Drosophila melanogaster CG13398-PA
           protein.
          Length = 442

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -3

Query: 431 NTSQYPFKQKVQVKHPHTTWLHFNRTEVKNIYGEPV-TQNQILGRSLTHAFNVASSYAKQ 255
           NT  +   ++ +V   H+  ++  RTE  N Y EP    ++ LG   +   + ++SY  Q
Sbjct: 112 NTDAFVQGERERVNSAHSVSVNMGRTEGNN-YLEPAPLMSRQLGNFHSEPSSTSASYPLQ 170

Query: 254 MHGEDVKDLP 225
            +   V D P
Sbjct: 171 ANDSQVDDSP 180


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,067,712
Number of Sequences: 53049
Number of extensions: 600102
Number of successful extensions: 1548
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1539
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2296745289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)