Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14d21
(580 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.2
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 1.6
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 1.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 23 1.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 2.2
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 2.2
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 3.8
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 22 5.0
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 511 FSTSCLTGLALVTSMFDTSW 570
F+T + G+ LVTS F T W
Sbjct: 304 FTTVFIPGIILVTSSFITFW 323
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 511 FSTSCLTGLALVTSMFDTSW 570
F+T + G+ LVTS F T W
Sbjct: 273 FTTVFIPGIILVTSSFITFW 292
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 511 FSTSCLTGLALVTSMFDTSW 570
F+T + G+ LVTS F T W
Sbjct: 324 FTTVFIPGIILVTSSFITFW 343
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.8 bits (49), Expect = 1.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 511 FSTSCLTGLALVTSMFDTSW 570
F+T + G+ LVTS F T W
Sbjct: 273 FTTVFIPGIILVTSSFITFW 292
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 158 NTLNVDGNEGIKNVWYCKNNMKLYDSSRYFSGMPV 54
N N + N K YC N KLY + Y +P+
Sbjct: 87 NNYNYNNNNYKK--LYCNNYKKLYYNINYIEQIPI 119
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 158 NTLNVDGNEGIKNVWYCKNNMKLYDSSRYFSGMPV 54
N N + N K YC N KLY + Y +P+
Sbjct: 87 NNYNYNNNNYKK--LYCNNYKKLYYNINYIEQIPI 119
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 1.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 158 NTLNVDGNEGIKNVWYCKNNMKLYDSSRYFSGMPV 54
N N + N K YC N KLY + Y +P+
Sbjct: 87 NNYNYNNNNYKK--LYCNNYRKLYYNINYIEQIPI 119
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 563 VSNILVTSAKPVKHEVEKDIPFVEI 489
VSN+ +TS K + + D P EI
Sbjct: 422 VSNVRITSVKSSELSISWDAPITEI 446
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 95 KLYDSSRYFSGMPVLENYNNK 33
+LY +R F+ + L+NYN+K
Sbjct: 54 ELYQKARTFNLVENLDNYNDK 74
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3
Query: 95 KLYDSSRYFSGMPVLENYNNK 33
+LY +R F+ + L+NYN+K
Sbjct: 54 ELYQKARTFNLVENLDNYNDK 74
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 3.8
Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +1
Query: 367 CNH--VV*GCFT*TFCLKGYWLVLL 435
C H V G T TFC KGY + LL
Sbjct: 443 CPHFNVTDGETTKTFCCKGYCMDLL 467
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 221 PIFVNCIQTDGQLY 180
PIF +Q DGQ Y
Sbjct: 62 PIFTIAVQIDGQTY 75
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,422
Number of Sequences: 438
Number of extensions: 3823
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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