Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14d10
         (511 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3302|AAM71021.2|  395|Drosophila melanogaster CG30396-P...    29   2.8  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   4.8  
AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA...    29   4.8  
AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB...    29   4.8  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   4.8  

>AE013599-3302|AAM71021.2|  395|Drosophila melanogaster CG30396-PA
           protein.
          Length = 395

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 19/77 (24%), Positives = 33/77 (42%)
 Frame = +1

Query: 229 LMSILGLAHYGEWAIPFVLRNNSFFFAGSDCLLILASDMLRGDVAIHTCLAFVFLCWSYF 408
           L+  + +   G   +P  L+   F         ++ +  L G +   T L F F  + Y 
Sbjct: 2   LLKFMYIYGIGCGLMPAPLKKGQFLLGYKQRWYLIYTACLHGGLL--TVLPFTFPHYMYD 59

Query: 409 DSFVITTPIFKWLDILT 459
           DS++ + P+ KW   LT
Sbjct: 60  DSYMSSNPVLKWTFNLT 76


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 353  PLNISEASISKQSEPAKKKLLFLRTKGIAHSP*CARPKMDIKYYYKNVLIRISKKYIEIY 174
            P  I+E    +Q  P +  +L  + +G+        P  +IK+Y+ ++L+  S+KY EI 
Sbjct: 6535 PPRITEKLRPRQCVPEEPTVLECKVEGV--------PFPEIKWYFNDILLFASEKY-EI- 6584

Query: 173  ATIIKNIIKMK 141
             T+++ + K+K
Sbjct: 6585 -TVMEQVAKLK 6594


>AE014298-1529|AAF47983.2| 2602|Drosophila melanogaster CG2174-PA,
            isoform A protein.
          Length = 2602

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 389  SCAGATSIALSLLHLFSSGWTS*LQDGK 472
            SC  A ++A+S L + S GWT  L DG+
Sbjct: 1108 SCEEAAALAVSSLGVASRGWTLVLDDGQ 1135


>AE014298-1528|ABI30975.1| 2693|Drosophila melanogaster CG2174-PB,
            isoform B protein.
          Length = 2693

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 389  SCAGATSIALSLLHLFSSGWTS*LQDGK 472
            SC  A ++A+S L + S GWT  L DG+
Sbjct: 1199 SCEEAAALAVSSLGVASRGWTLVLDDGQ 1226


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
            isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/71 (28%), Positives = 39/71 (54%)
 Frame = -3

Query: 353  PLNISEASISKQSEPAKKKLLFLRTKGIAHSP*CARPKMDIKYYYKNVLIRISKKYIEIY 174
            P  I+E    +Q  P +  +L  + +G+        P  +IK+Y+ ++L+  S+KY EI 
Sbjct: 6535 PPRITEKLRPRQCVPEEPTVLECKVEGV--------PFPEIKWYFNDILLFASEKY-EI- 6584

Query: 173  ATIIKNIIKMK 141
             T+++ + K+K
Sbjct: 6585 -TVMEQVAKLK 6594


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,929,604
Number of Sequences: 53049
Number of extensions: 420226
Number of successful extensions: 1100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1846255872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)