Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c23
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15525-1|CAA33542.1| 423|Homo sapiens acid phosphatase protein. 38 0.027
X12548-1|CAA31064.1| 423|Homo sapiens protein ( Human mRNA for ... 38 0.027
BC093010-1|AAH93010.1| 423|Homo sapiens acid phosphatase 2, lys... 38 0.027
BC003160-1|AAH03160.1| 423|Homo sapiens acid phosphatase 2, lys... 38 0.027
X53605-1|CAA37673.1| 386|Homo sapiens protein ( Human mRNA for ... 36 0.11
X52174-1|CAA36422.1| 386|Homo sapiens protein ( Human ACPP mRNA... 36 0.11
U07097-1|AAB60640.1| 386|Homo sapiens prostatic acid phosphatas... 36 0.11
M97589-1|AAA60021.1| 386|Homo sapiens prostatic acid phosphatas... 36 0.11
M34840-1|AAA69694.1| 386|Homo sapiens acid phosphatase protein. 36 0.11
BC008493-1|AAH08493.1| 386|Homo sapiens acid phosphatase, prost... 36 0.11
BC007460-1|AAH07460.1| 418|Homo sapiens ACPP protein protein. 36 0.11
AB102888-1|BAD89417.1| 353|Homo sapiens Acid phosphatase prosta... 36 0.11
BC016344-1|AAH16344.1| 386|Homo sapiens acid phosphatase, prost... 34 0.45
M24902-1|AAA60022.1| 386|Homo sapiens acid phosphatase protein. 32 1.4
>X15525-1|CAA33542.1| 423|Homo sapiens acid phosphatase protein.
Length = 423
Score = 37.9 bits (84), Expect = 0.027
Identities = 12/56 (21%), Positives = 31/56 (55%)
Frame = -1
Query: 538 DEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDCKLVA 371
D F ++Y+ ++ P + +P C C ++ F LT+ ++ +++++C+L +
Sbjct: 319 DSGNFSVEMYFRNESDKAPWPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQECQLAS 374
>X12548-1|CAA31064.1| 423|Homo sapiens protein ( Human mRNA for
lysosomal acid phosphatase (EC 3.1.3.2). ).
Length = 423
Score = 37.9 bits (84), Expect = 0.027
Identities = 12/56 (21%), Positives = 31/56 (55%)
Frame = -1
Query: 538 DEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDCKLVA 371
D F ++Y+ ++ P + +P C C ++ F LT+ ++ +++++C+L +
Sbjct: 319 DSGNFSVEMYFRNESDKAPWPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQECQLAS 374
>BC093010-1|AAH93010.1| 423|Homo sapiens acid phosphatase 2,
lysosomal protein.
Length = 423
Score = 37.9 bits (84), Expect = 0.027
Identities = 12/56 (21%), Positives = 31/56 (55%)
Frame = -1
Query: 538 DEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDCKLVA 371
D F ++Y+ ++ P + +P C C ++ F LT+ ++ +++++C+L +
Sbjct: 319 DSGNFSVEMYFRNESDKAPWPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQECQLAS 374
>BC003160-1|AAH03160.1| 423|Homo sapiens acid phosphatase 2,
lysosomal protein.
Length = 423
Score = 37.9 bits (84), Expect = 0.027
Identities = 12/56 (21%), Positives = 31/56 (55%)
Frame = -1
Query: 538 DEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDCKLVA 371
D F ++Y+ ++ P + +P C C ++ F LT+ ++ +++++C+L +
Sbjct: 319 DSGNFSVEMYFRNESDKAPWPLSLPGCPHRCPLQDFLRLTEPVVPKDWQQECQLAS 374
>X53605-1|CAA37673.1| 386|Homo sapiens protein ( Human mRNA for
prostatic acid phosphatase (EC 3.1.3.2). ).
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>X52174-1|CAA36422.1| 386|Homo sapiens protein ( Human ACPP mRNA
for prostatic acid phosphatase (EC 3.1.3.2). ).
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>U07097-1|AAB60640.1| 386|Homo sapiens prostatic acid phosphatase
protein.
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>M97589-1|AAA60021.1| 386|Homo sapiens prostatic acid phosphatase
protein.
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>M34840-1|AAA69694.1| 386|Homo sapiens acid phosphatase protein.
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>BC008493-1|AAH08493.1| 386|Homo sapiens acid phosphatase, prostate
protein.
Length = 386
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>BC007460-1|AAH07460.1| 418|Homo sapiens ACPP protein protein.
Length = 418
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELAGPVIPQDWSTEC 372
>AB102888-1|BAD89417.1| 353|Homo sapiens Acid phosphatase prostate
nirs variant 1 protein.
Length = 353
Score = 35.9 bits (79), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
++YY ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 295 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 339
>BC016344-1|AAH16344.1| 386|Homo sapiens acid phosphatase, prostate
protein.
Length = 386
Score = 33.9 bits (74), Expect = 0.45
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEEDC 383
+++Y ++ EP + +P C+ C +E+F EL +I ++ +C
Sbjct: 328 EMHYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTEC 372
>M24902-1|AAA60022.1| 386|Homo sapiens acid phosphatase protein.
Length = 386
Score = 32.3 bits (70), Expect = 1.4
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAHNYEED 386
++YY ++ EP + +P C+ C +E+F EL +I ++ +
Sbjct: 328 EMYYRNETQHEPYPLMLPGCSPSCPLERFAELVGPVIPQDWSTE 371
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,588,942
Number of Sequences: 237096
Number of extensions: 1248618
Number of successful extensions: 1753
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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