Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c23
(607 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060747-1|AAL28295.1| 395|Drosophila melanogaster GH19849p pro... 46 5e-05
AE014297-3058|AAF55931.1| 395|Drosophila melanogaster CG6656-PA... 46 5e-05
AY118831-1|AAM50691.1| 410|Drosophila melanogaster GH28721p pro... 40 0.003
AE014296-3160|AAF49155.1| 410|Drosophila melanogaster CG9451-PA... 40 0.003
BT001641-1|AAN71396.1| 455|Drosophila melanogaster RE40943p pro... 35 0.099
AY071077-1|AAL48699.1| 438|Drosophila melanogaster RE14694p pro... 35 0.099
AE014297-4496|AAF56981.1| 438|Drosophila melanogaster CG7899-PA... 35 0.099
AE014297-4495|AAN14203.1| 455|Drosophila melanogaster CG7899-PB... 35 0.099
>AY060747-1|AAL28295.1| 395|Drosophila melanogaster GH19849p
protein.
Length = 395
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 604 AALLFELHERQP-NKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFK 428
+AL FELH + + G E L +YY++ + P+ + +PNC++ C++ QF+
Sbjct: 321 SALAFELHHSKSFSDGDFEVKL---------VYYYNSEDKFPKELTIPNCDAPCSLTQFE 371
Query: 427 ELTKYIIAHNYEEDCK 380
K ++ NY+E C+
Sbjct: 372 ASVKALLLDNYDETCE 387
>AE014297-3058|AAF55931.1| 395|Drosophila melanogaster CG6656-PA
protein.
Length = 395
Score = 45.6 bits (103), Expect = 5e-05
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 604 AALLFELHERQP-NKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFK 428
+AL FELH + + G E L +YY++ + P+ + +PNC++ C++ QF+
Sbjct: 321 SALAFELHHSKSFSDGDFEVKL---------VYYYNSEDKFPKELTIPNCDAPCSLTQFE 371
Query: 427 ELTKYIIAHNYEEDCK 380
K ++ NY+E C+
Sbjct: 372 ASVKALLLDNYDETCE 387
>AY118831-1|AAM50691.1| 410|Drosophila melanogaster GH28721p
protein.
Length = 410
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAH-NYEEDCKLVAEQ 365
+IY+ +D EP+ +++P C C I + ELTK II Y E CK Q
Sbjct: 351 EIYFQNDPHKEPQQLQIPGCEKQCPIGKLLELTKDIIPDAPYAELCKAKGTQ 402
>AE014296-3160|AAF49155.1| 410|Drosophila melanogaster CG9451-PA
protein.
Length = 410
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 517 KIYYWDDDSAEPRLMEVPNCNSFCTIEQFKELTKYIIAH-NYEEDCKLVAEQ 365
+IY+ +D EP+ +++P C C I + ELTK II Y E CK Q
Sbjct: 351 EIYFQNDPHKEPQQLQIPGCEKQCPIGKLLELTKDIIPDAPYAELCKAKGTQ 402
>BT001641-1|AAN71396.1| 455|Drosophila melanogaster RE40943p
protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -1
Query: 604 AALLFELHERQPNKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKE 425
A LFELH DE ++ + +AEP +++P C C + +
Sbjct: 328 ALKLFELHSPPYTACIMMELRVDETNTPLVSIFYKNTTAEPLPLDIPGCGPSCPLTKLMN 387
Query: 424 LTKYIIAHNYEEDCKL 377
+ + ++ ++E +CKL
Sbjct: 388 IYEDVLPVDWERECKL 403
>AY071077-1|AAL48699.1| 438|Drosophila melanogaster RE14694p
protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -1
Query: 604 AALLFELHERQPNKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKE 425
A LFELH DE ++ + +AEP +++P C C + +
Sbjct: 311 ALKLFELHSPPYTACIMMELRVDETNTPLVSIFYKNTTAEPLPLDIPGCGPSCPLTKLMN 370
Query: 424 LTKYIIAHNYEEDCKL 377
+ + ++ ++E +CKL
Sbjct: 371 IYEDVLPVDWERECKL 386
>AE014297-4496|AAF56981.1| 438|Drosophila melanogaster CG7899-PA,
isoform A protein.
Length = 438
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -1
Query: 604 AALLFELHERQPNKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKE 425
A LFELH DE ++ + +AEP +++P C C + +
Sbjct: 311 ALKLFELHSPPYTACIMMELRVDETNTPLVSIFYKNTTAEPLPLDIPGCGPSCPLTKLMN 370
Query: 424 LTKYIIAHNYEEDCKL 377
+ + ++ ++E +CKL
Sbjct: 371 IYEDVLPVDWERECKL 386
>AE014297-4495|AAN14203.1| 455|Drosophila melanogaster CG7899-PB,
isoform B protein.
Length = 455
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/76 (23%), Positives = 34/76 (44%)
Frame = -1
Query: 604 AALLFELHERQPNKGKNEPSLNDEQRFGFKIYYWDDDSAEPRLMEVPNCNSFCTIEQFKE 425
A LFELH DE ++ + +AEP +++P C C + +
Sbjct: 328 ALKLFELHSPPYTACIMMELRVDETNTPLVSIFYKNTTAEPLPLDIPGCGPSCPLTKLMN 387
Query: 424 LTKYIIAHNYEEDCKL 377
+ + ++ ++E +CKL
Sbjct: 388 IYEDVLPVDWERECKL 403
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,080,994
Number of Sequences: 53049
Number of extensions: 405406
Number of successful extensions: 996
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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