Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c23
(607 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 24 1.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.8
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 2.3
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 23 3.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 3.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 7.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 7.1
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -2
Query: 579 NDNRIKEKTNHHSTTSNVSDLRSITGTMIQ 490
N+NR+ ++ N N L++ITG ++
Sbjct: 329 NENRLLDRRNIEVVAKNKETLQAITGLKVK 358
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 1.8
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -2
Query: 525 SDLRSITGTMIQLNLVSWKCPIAIPSARLNNSKS*RNT*LP--IIMKKTVSSLRNKPIEL 352
S L SIT + + + C A P+A + + + P I+ VS RNK + L
Sbjct: 671 SSLLSITNLAAE-HSGDYTCVAANPAAEVRYTAKLQVKVPPRWIVEPTDVSVERNKHVAL 729
Query: 351 RCKAFDLVTP 322
C+A + TP
Sbjct: 730 HCQAQGVPTP 739
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 67 LLAFFLTTLVRTTAV 23
L FFLTT+V TT +
Sbjct: 433 LCVFFLTTIVSTTVI 447
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 22.6 bits (46), Expect = 3.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +1
Query: 367 VPQRAYSLLHNYGQLCISLTL*IVQSCRRNCNW 465
V Q A YGQL + TL + R NW
Sbjct: 181 VEQEAKRRFEKYGQLFMEETLKAAKRMRPAANW 213
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 402 IIMKKTVSSLRNKPIELRCKAFDLVTP 322
I+ VS RNK + L C+A + TP
Sbjct: 709 IVEPTDVSVERNKHVALHCQAQGVPTP 735
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDLRSI 508
YSNY N N N+ N++ + I
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIEQI 119
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 594 YSNYTNDNRIKEKTNHHSTTSNVSDL 517
YSNY N N +K + + N+ +
Sbjct: 91 YSNYNNYNNYNKKLYYKNYIINIEQI 116
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,880
Number of Sequences: 438
Number of extensions: 2949
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17848938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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