Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c09
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein. 135 2e-31
BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase, G... 135 2e-31
BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein. 135 2e-31
BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for IM... 135 2e-31
BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase, G... 135 2e-31
AF131748-1|AAD20032.1| 199|Homo sapiens GTP-specific succinyl-C... 135 2e-31
AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-C... 135 2e-31
BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein pr... 100 1e-20
BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase, A... 100 1e-20
AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase, A... 100 1e-20
AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase, A... 100 1e-20
AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein pr... 100 1e-20
AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens ... 100 1e-20
AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens ... 100 1e-20
AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA synth... 100 1e-20
AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-C... 100 1e-20
AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl C... 100 1e-20
AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase, A... 45 3e-04
>BC068602-1|AAH68602.1| 432|Homo sapiens SUCLG2 protein protein.
Length = 432
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 319 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 378
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 379 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 412
>BC047024-1|AAH47024.1| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 271 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 330
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 331 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 364
>BC035149-1|AAH35149.1| 362|Homo sapiens SUCLG2 protein protein.
Length = 362
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 249 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 308
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 309 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 342
>BC019868-1|AAH19868.1| 321|Homo sapiens Unknown (protein for
IMAGE:4996134) protein.
Length = 321
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 208 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 267
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 268 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 301
>BC007716-1|AAH07716.3| 384|Homo sapiens succinate-CoA ligase,
GDP-forming, beta subunit protein.
Length = 384
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 271 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 330
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 331 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 364
>AF131748-1|AAD20032.1| 199|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 199
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 86 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 145
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 146 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 179
>AF058954-1|AAC64397.1| 404|Homo sapiens GTP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 404
Score = 135 bits (326), Expect = 2e-31
Identities = 65/94 (69%), Positives = 74/94 (78%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLDLGGGV ++QV A K+L +DPKV+ I VN+FGGIVNCA IANGI
Sbjct: 291 IIFLNGGKPANFLDLGGGVKEAQVYQAFKLLTADPKVEAILVNIFGGIVNCAIIANGITK 350
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
ACRE K PLV+RLEGTN EA+KIL SGLP+
Sbjct: 351 ACRELELKVPLVVRLEGTNVQEAQKILNNSGLPI 384
>BX640602-1|CAE45708.1| 472|Homo sapiens hypothetical protein
protein.
Length = 472
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 343 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 402
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 403 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 436
>BC027587-1|AAH27587.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 334 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 393
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 394 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 427
>AL157369-4|CAI15153.1| 441|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 441
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 312 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 371
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 372 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 405
>AL157369-1|CAI15149.1| 463|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 463
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 334 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 393
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 394 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 427
>AL080096-1|CAB45708.2| 211|Homo sapiens hypothetical protein
protein.
Length = 211
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 82 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 141
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 142 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 175
>AK001847-1|BAA91939.1| 463|Homo sapiens protein ( Homo sapiens
cDNA FLJ10985 fis, clone PLACE1001817, highly similar to
Homo sapiens ATP-specific succinyl-CoA synthetase beta
subunit ).
Length = 463
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 334 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 393
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 394 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 427
>AK001458-1|BAA91703.1| 441|Homo sapiens protein ( Homo sapiens
cDNA FLJ10596 fis, clone NT2RP2004799, moderately
similar to PROBABLE SUCCINYL-COA LIGASE [GDP-FORMING],
BETA-CHAIN ).
Length = 441
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 312 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 371
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 372 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 405
>AF087890-1|AAP97189.1| 403|Homo sapiens beta-succinyl CoA
synthetase protein.
Length = 403
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 274 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 333
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 334 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 367
>AF058953-1|AAC64396.1| 426|Homo sapiens ATP-specific succinyl-CoA
synthetase beta subunit protein.
Length = 426
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 297 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 356
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 357 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 390
>AB035863-1|BAA92873.1| 463|Homo sapiens ATP specific succinyl CoA
synthetase beta subunit precursor protein.
Length = 463
Score = 99.5 bits (237), Expect = 1e-20
Identities = 47/94 (50%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L+GG PANFLD+GGG QV+ A K++ SD KV I VN+FGGI+ C IA GIV
Sbjct: 334 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSDKKVLAILVNIFGGIMRCDVIAQGIVM 393
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ K P+V+RL+GT +A+ ++ SGL +
Sbjct: 394 AVKDLEIKIPVVVRLQGTRVDDAKALIADSGLKI 427
>AL157369-2|CAI15150.1| 298|Homo sapiens succinate-CoA ligase,
ADP-forming, beta subunit protein.
Length = 298
Score = 44.8 bits (101), Expect = 3e-04
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESD 595
II L+GG PANFLD+GGG QV+ A K++ SD
Sbjct: 264 IIKLHGGTPANFLDVGGGATVHQVTEAFKLITSD 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,950,646
Number of Sequences: 237096
Number of extensions: 1746831
Number of successful extensions: 2743
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2743
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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