Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c09
(696 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051980-1|AAK93404.1| 416|Drosophila melanogaster LD44970p pro... 131 8e-31
AJ252069-1|CAB64384.1| 416|Drosophila melanogaster putative suc... 131 8e-31
AE014296-966|AAF50771.1| 416|Drosophila melanogaster CG10622-PA... 131 8e-31
AY058331-1|AAL13560.1| 503|Drosophila melanogaster GH10480p pro... 104 1e-22
AE014297-840|AAF54308.2| 502|Drosophila melanogaster CG11963-PA... 104 1e-22
AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep pro... 29 8.0
AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-P... 29 8.0
>AY051980-1|AAK93404.1| 416|Drosophila melanogaster LD44970p
protein.
Length = 416
Score = 131 bits (317), Expect = 8e-31
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLD+GGGV + QV+ A +IL +DPKVK I VNVFGGIVNCATIANGIV+
Sbjct: 305 IIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVA 364
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPVK 412
A ++ PLV+RLEGTN +AR+IL+ SGLP++
Sbjct: 365 ASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQ 399
>AJ252069-1|CAB64384.1| 416|Drosophila melanogaster putative
succinyl-coa ligase (GDP-forming) beta-chain precursor
protein.
Length = 416
Score = 131 bits (317), Expect = 8e-31
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLD+GGGV + QV+ A +IL +DPKVK I VNVFGGIVNCATIANGIV+
Sbjct: 305 IIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVA 364
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPVK 412
A ++ PLV+RLEGTN +AR+IL+ SGLP++
Sbjct: 365 ASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQ 399
>AE014296-966|AAF50771.1| 416|Drosophila melanogaster CG10622-PA,
isoform A protein.
Length = 416
Score = 131 bits (317), Expect = 8e-31
Identities = 63/95 (66%), Positives = 77/95 (81%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II LNGG PANFLD+GGGV + QV+ A +IL +DPKVK I VNVFGGIVNCATIANGIV+
Sbjct: 305 IIKLNGGEPANFLDVGGGVREDQVAKAFEILTADPKVKGILVNVFGGIVNCATIANGIVA 364
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPVK 412
A ++ PLV+RLEGTN +AR+IL+ SGLP++
Sbjct: 365 ASKKLQLNVPLVVRLEGTNVNQAREILKNSGLPIQ 399
>AY058331-1|AAL13560.1| 503|Drosophila melanogaster GH10480p
protein.
Length = 503
Score = 104 bits (249), Expect = 1e-22
Identities = 50/94 (53%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L GG PANFLD+GGG V AA KI+ SDPKV I VN+FGGI+ C IA GI+S
Sbjct: 320 IIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIIS 379
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ P+V+RL+GT EAR+++ SGL +
Sbjct: 380 ATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKI 413
>AE014297-840|AAF54308.2| 502|Drosophila melanogaster CG11963-PA
protein.
Length = 502
Score = 104 bits (249), Expect = 1e-22
Identities = 50/94 (53%), Positives = 64/94 (68%)
Frame = -1
Query: 696 IITLNGGXPANFLDLGGGVGQSQVSAALKILESDPKVKTIFVNVFGGIVNCATIANGIVS 517
II L GG PANFLD+GGG V AA KI+ SDPKV I VN+FGGI+ C IA GI+S
Sbjct: 319 IIKLYGGEPANFLDVGGGATAEAVKAAFKIITSDPKVLCILVNIFGGIMRCDVIAEGIIS 378
Query: 516 ACRENPPKHPLVIRLEGTNSGEARKILEQSGLPV 415
A ++ P+V+RL+GT EAR+++ SGL +
Sbjct: 379 ATKDLNLNMPVVVRLQGTKVKEARELIRTSGLKI 412
>AF358267-1|AAK40237.1| 939|Drosophila melanogaster sidestep
protein.
Length = 939
Score = 28.7 bits (61), Expect = 8.0
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = -1
Query: 651 GGGVGQSQVSAALKI---LESDP-KVKTIF----VNVFGGIVNCATIANGIVSACRENP- 499
GGGVG S S+ L S P K T+ V V G +V + I GIV CR P
Sbjct: 765 GGGVGGSGSSSGLGTGASTGSGPEKQSTLLILAAVVVIGAVVVTSIIVAGIVVVCRHRPR 824
Query: 498 PKHPLVIR 475
P P +R
Sbjct: 825 PPEPQEVR 832
>AE014297-4124|AAF56708.2| 939|Drosophila melanogaster CG31062-PA
protein.
Length = 939
Score = 28.7 bits (61), Expect = 8.0
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = -1
Query: 651 GGGVGQSQVSAALKI---LESDP-KVKTIF----VNVFGGIVNCATIANGIVSACRENP- 499
GGGVG S S+ L S P K T+ V V G +V + I GIV CR P
Sbjct: 765 GGGVGGSGSSSGLGTGASTGSGPEKQSTLLILAAVVVIGAVVVTSIIVAGIVVVCRHRPR 824
Query: 498 PKHPLVIR 475
P P +R
Sbjct: 825 PPEPQEVR 832
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,296,751
Number of Sequences: 53049
Number of extensions: 519283
Number of successful extensions: 1144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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