Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c06
(639 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical ... 212 2e-55
AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa dehy... 204 3e-53
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 138 2e-33
U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical pr... 138 2e-33
U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical p... 130 1e-30
U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical pr... 107 9e-24
U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical pr... 106 2e-23
U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical pr... 101 4e-22
AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical ... 93 1e-19
U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical pr... 81 5e-16
L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 79 4e-15
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 79 4e-15
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa dehy... 63 2e-10
Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical pr... 61 8e-10
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 59 3e-09
U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical ... 50 1e-06
AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical ... 50 1e-06
U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical pr... 35 0.043
AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine re... 29 2.8
U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interactin... 27 8.6
U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division c... 27 8.6
U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division c... 27 8.6
U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division c... 27 8.6
U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division c... 27 8.6
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 27 8.6
AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14 phosph... 27 8.6
AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14 phosph... 27 8.6
AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14 phosph... 27 8.6
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 27 8.6
AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14 phosph... 27 8.6
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 27 8.6
AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine re... 27 8.6
AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein phosp... 27 8.6
>AF039038-2|AAK21433.1| 419|Caenorhabditis elegans Hypothetical
protein K06A5.6 protein.
Length = 419
Score = 212 bits (517), Expect = 2e-55
Identities = 97/159 (61%), Positives = 125/159 (78%)
Frame = -1
Query: 639 LENMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQ 460
L KG LN GRIGI AQM+GL QGC D TIPY +R+QFG+++ +FQG+ +Q
Sbjct: 259 LGEYGKGYKYAIECLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRLIDFQGMQHQ 318
Query: 459 IAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFT 280
I + ++EAARLL YNAAR+K++G FV+EAAMAK FAS++A T TSKC++++GGVGFT
Sbjct: 319 IGQTRMEIEAARLLVYNAARMKQNGLPFVREAAMAKLFASQVATTATSKCVEWLGGVGFT 378
Query: 279 RDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ 163
++FP EKFYRD+KIGTIYEGTSN+QL TIAKL++ EY Q
Sbjct: 379 KEFPVEKFYRDSKIGTIYEGTSNIQLNTIAKLVDIEYQQ 417
>AC006625-5|AAK68275.1| 427|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform a protein.
Length = 427
Score = 204 bits (499), Expect = 3e-53
Identities = 93/157 (59%), Positives = 122/157 (77%)
Frame = -1
Query: 639 LENMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQ 460
L KG LN GRI I AQMIGL QGC D TIPY +R+QFG+++ +FQG+ +Q
Sbjct: 267 LGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQGLQHQ 326
Query: 459 IAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFT 280
IA +T++EAARLL YNAAR+KE+G +V+EAAMAK FAS++A + +++C+ ++GGVGFT
Sbjct: 327 IAQARTEIEAARLLVYNAARMKEYGIPYVREAAMAKLFASQVATSTSAQCVKWLGGVGFT 386
Query: 279 RDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 169
++FP EKFYRDA IG IYEGTSN+QL TIAKL++ EY
Sbjct: 387 KEFPAEKFYRDAMIGEIYEGTSNIQLNTIAKLIDNEY 423
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 138 bits (335), Expect = 2e-33
Identities = 61/102 (59%), Positives = 83/102 (81%)
Frame = -1
Query: 474 GISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMG 295
G+ +QIA +QT++EAARL+ YN AR+K+ G FVKEA+MAKY+A E+A T +CI+++G
Sbjct: 115 GLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLG 174
Query: 294 GVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 169
GVGFT++F EKFYRDA +G IYEGTSN+QL TIAK ++ E+
Sbjct: 175 GVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 216
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 637 GEYGKGYKYA 608
GEYGKGYKYA
Sbjct: 90 GEYGKGYKYA 99
>U41279-8|AAL02436.1| 307|Caenorhabditis elegans Hypothetical
protein C17C3.12b protein.
Length = 307
Score = 138 bits (335), Expect = 2e-33
Identities = 61/102 (59%), Positives = 83/102 (81%)
Frame = -1
Query: 474 GISYQIAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMG 295
G+ +QIA +QT++EAARL+ YN AR+K+ G FVKEA+MAKY+A E+A T +CI+++G
Sbjct: 202 GLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFVKEASMAKYYAPEVACKTTKQCIEWLG 261
Query: 294 GVGFTRDFPQEKFYRDAKIGTIYEGTSNMQLQTIAKLLEREY 169
GVGFT++F EKFYRDA +G IYEGTSN+QL TIAK ++ E+
Sbjct: 262 GVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFIDNEF 303
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 637 GEYGKGYKYA 608
GEYGKGYKYA
Sbjct: 177 GEYGKGYKYA 186
>U97403-10|AAB52476.3| 319|Caenorhabditis elegans Hypothetical
protein T10E9.9 protein.
Length = 319
Score = 130 bits (313), Expect = 1e-30
Identities = 60/100 (60%), Positives = 76/100 (76%)
Frame = -1
Query: 639 LENMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQ 460
L KG +LN GRIGI AQM+GL QGC D TIPY +R+QFG++I +FQG+ +Q
Sbjct: 194 LGEFGKGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQTIPYLQQREQFGQRIIDFQGMQHQ 253
Query: 459 IAHLQTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFAS 340
IA ++T++EAARLL YNAAR+K+HG FV+EAAMAK FAS
Sbjct: 254 IAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFAS 293
>U43283-1|AAC69025.1| 412|Caenorhabditis elegans Hypothetical
protein T25G12.5 protein.
Length = 412
Score = 107 bits (256), Expect = 9e-24
Identities = 53/132 (40%), Positives = 74/132 (56%)
Frame = -1
Query: 576 IAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNAARL 397
+AA G+ C+D Y+LERK FG +I QG+S+ +A + E ARL+TY +
Sbjct: 271 VAALATGVAYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINCELARLMTYKSGAE 330
Query: 396 KEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIYEGT 217
+ G A++AK FAS+ A + + GG GF ++P EK RDAKI IYEGT
Sbjct: 331 VDAGRPGSYYASIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYEGT 390
Query: 216 SNMQLQTIAKLL 181
S +Q IA+ L
Sbjct: 391 SQIQRMVIARQL 402
>U42838-2|AAB52493.1| 417|Caenorhabditis elegans Hypothetical
protein T08G2.3 protein.
Length = 417
Score = 106 bits (254), Expect = 2e-23
Identities = 54/141 (38%), Positives = 79/141 (56%)
Frame = -1
Query: 585 RIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLLTYNA 406
R G+AA +GL C+D + Y LERK FG I Q + + +A + LE ARL+TY +
Sbjct: 271 RPGVAAGALGLSWRCLDESAKYALERKAFGTVIANHQAVQFMLADMAVNLELARLITYKS 330
Query: 405 ARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAKIGTIY 226
A ++ A++AK FA++ A + + GG GF ++P EK RDAKI IY
Sbjct: 331 ANDVDNKVRSSYNASIAKCFAADTANQAATNAVQIFGGNGFNSEYPVEKLMRDAKIYQIY 390
Query: 225 EGTSNMQLQTIAKLLEREYTQ 163
EGTS +Q I+++L + Q
Sbjct: 391 EGTSQIQRIVISRMLLGHFAQ 411
>U29377-4|AAA68712.1| 412|Caenorhabditis elegans Hypothetical
protein K05F1.3 protein.
Length = 412
Score = 101 bits (242), Expect = 4e-22
Identities = 54/153 (35%), Positives = 77/153 (50%)
Frame = -1
Query: 621 GTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQT 442
G G + R +AA +GL C+D + Y +ER FG I QG+ + IA +
Sbjct: 253 GFKVAMGAFDLTRPQVAASAVGLAWRCLDESTKYAMERHAFGTPIANHQGVQFMIADMAI 312
Query: 441 QLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQE 262
LE +RL TY AA + A++AK FA++ A + GG GF ++P E
Sbjct: 313 NLELSRLFTYRAAAEVDSYGVSSYNASIAKCFAADTANVAATNACQIFGGAGFNCEYPVE 372
Query: 261 KFYRDAKIGTIYEGTSNMQLQTIAKLLEREYTQ 163
K RDAKI IYEGTS +Q I + L + + +
Sbjct: 373 KLMRDAKIYQIYEGTSQIQRMVIGRTLFQNFAK 405
>AC006632-9|AAK85472.1| 409|Caenorhabditis elegans Hypothetical
protein F28A10.6 protein.
Length = 409
Score = 93.5 bits (222), Expect = 1e-19
Identities = 51/138 (36%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = -1
Query: 597 LNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARLL 418
LN GRI IA+ +G Q MD I + RKQFGK + +FQ +++A L T+L +RL+
Sbjct: 261 LNGGRINIASCSLGAAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLYTSRLI 320
Query: 417 TYNAA-RLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAK 241
NAA +L E V AMAK A++ + + + GG GF +D+P +++ RD +
Sbjct: 321 VRNAAEQLDNDDPEKVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDIR 380
Query: 240 IGTIYEGTSNMQLQTIAK 187
+ I EGT+ M I++
Sbjct: 381 VHQILEGTNEMMRLLISR 398
>U28943-2|AAA68357.1| 613|Caenorhabditis elegans Hypothetical
protein E04F6.5a protein.
Length = 613
Score = 83.0 bits (196), Expect = 2e-16
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQ 445
+G LN GR GI A G + C+ T+ + R QFGKK+ EF I ++ +
Sbjct: 296 EGFKVAMNILNNGRFGIPAACTGAMKHCIQKTVDHITTRVQFGKKLQEFGNIQEKLVEMI 355
Query: 444 TQLEAARLLTYNAARLKEHG-HEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFP 268
++L A + Y + + G E+ EAA+ K ASE A + I GG+GF R+
Sbjct: 356 SKLYATESIVYMLSSNMDRGIKEYQLEAAIGKVLASENAWLVCDDAIQVHGGMGFMRETG 415
Query: 267 QEKFYRDAKIGTIYEGTSNM 208
E+ RD +I I+EG +++
Sbjct: 416 LERVLRDLRIFRIFEGANDV 435
>U97194-5|AAB52448.1| 442|Caenorhabditis elegans Hypothetical
protein C37A2.3 protein.
Length = 442
Score = 81.4 bits (192), Expect = 5e-16
Identities = 43/142 (30%), Positives = 73/142 (51%)
Frame = -1
Query: 600 FLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARL 421
F +E + +A ++ L Q C+D TI Y +R FGK + + Q I +Q+A L+ +LEA R
Sbjct: 296 FNDERLVTVAVGLLPL-QKCIDETIEYARDRLLFGKTLLDQQYIQFQLAELEAELEATRA 354
Query: 420 LTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAK 241
L Y + G + AMAK +A+ +T +C+ GG G+ + + +RD +
Sbjct: 355 LLYRTVLARSRGDDVSMLTAMAKLKIGRLARAITDQCLQVWGGAGYLNENGISRAFRDFR 414
Query: 240 IGTIYEGTSNMQLQTIAKLLER 175
+ +I G + ++ I K R
Sbjct: 415 LFSIGAGCDEVMMRIIHKAQSR 436
>L16622-6|AAA27913.2| 408|Caenorhabditis elegans Hypothetical
protein C02D5.1 protein.
Length = 408
Score = 79.4 bits (187), Expect = 2e-15
Identities = 43/138 (31%), Positives = 72/138 (52%)
Frame = -1
Query: 600 FLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQLEAARL 421
F +E + +A ++ L Q C++ TI Y ER FGK + + Q + +++A L+ +LEA R
Sbjct: 262 FNDERLVTVAVGLLPL-QKCINETIEYARERLIFGKTLLDQQYVQFRLAELEAELEATRS 320
Query: 420 LTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQEKFYRDAK 241
L Y + G + AMAK +A+ +T +C+ GG G+ D + +RD +
Sbjct: 321 LLYRTVLARCQGEDVSMLTAMAKLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFR 380
Query: 240 IGTIYEGTSNMQLQTIAK 187
I +I G + +Q I K
Sbjct: 381 IFSIGAGCDEVMMQIIHK 398
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 78.6 bits (185), Expect = 4e-15
Identities = 45/153 (29%), Positives = 74/153 (48%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQ 445
KG L+ R+ ++ +GL Q D Y +R FG+KI FQ + ++A +
Sbjct: 266 KGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMY 325
Query: 444 TQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQ 265
T L A+R Y A+ + G+ K+ A + +E + I +GG G+ D+P
Sbjct: 326 TTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPA 385
Query: 264 EKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYT 166
+ RDAK+ I GTS ++ I + L +EY+
Sbjct: 386 GRLLRDAKLYEIGAGTSEVRRLIIGRALNKEYS 418
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 78.6 bits (185), Expect = 4e-15
Identities = 45/153 (29%), Positives = 74/153 (48%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQ 445
KG L+ R+ ++ +GL Q D Y +R FG+KI FQ + ++A +
Sbjct: 266 KGVYVLMTGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMY 325
Query: 444 TQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFPQ 265
T L A+R Y A+ + G+ K+ A + +E + I +GG G+ D+P
Sbjct: 326 TTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPA 385
Query: 264 EKFYRDAKIGTIYEGTSNMQLQTIAKLLEREYT 166
+ RDAK+ I GTS ++ I + L +EY+
Sbjct: 386 GRLLRDAKLYEIGAGTSEVRRLIIGRALNKEYS 418
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical protein
K09H11.1 protein.
Length = 985
Score = 66.5 bits (155), Expect = 2e-11
Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQ 445
KG G L GRI A ++IG + +D L R FG+K+ +F + ++A +
Sbjct: 831 KGFEIAQGRLGPGRIHHAMRLIGHAERAIDVIKDRLLTRIAFGRKLVQFDSLRKELALSR 890
Query: 444 TQLEAARLLTYNAARLKE--HGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDF 271
++E ARLL AA + + E E AM K A +A ++ + + G G T
Sbjct: 891 CEVEQARLLVLKAAHMIDTVGPKEAKSEIAMIKVVAPNMAISILDRAMQQQGARGLTPFT 950
Query: 270 PQEKFYRDAKIGTIYEGTSNMQLQTIAKL 184
P FY A+ I +G + L+TIAK+
Sbjct: 951 PLASFYVWARSLRIADGPDAVHLETIAKI 979
>AC006625-6|AAN84837.1| 252|Caenorhabditis elegans Acyl coa
dehydrogenase protein1, isoform b protein.
Length = 252
Score = 62.9 bits (146), Expect = 2e-10
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = -1
Query: 639 LENMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGI 469
L KG LN GRI I AQMIGL QGC D TIPY +R+QFG+++ +FQ I
Sbjct: 174 LGEYGKGYKYAIECLNAGRIAIGAQMIGLAQGCFDQTIPYLQQREQFGQRLIDFQVI 230
>Z66513-4|CAA91333.1| 409|Caenorhabditis elegans Hypothetical
protein F54D5.7 protein.
Length = 409
Score = 60.9 bits (141), Expect = 8e-10
Identities = 36/149 (24%), Positives = 70/149 (46%)
Frame = -1
Query: 627 AKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHL 448
A+G G LN R+GIA +G + C YTL+R+QFG+ + + Q + ++A +
Sbjct: 254 AEGLQGPFGCLNNARLGIAWGALGAAEECFHLARQYTLDRQQFGRPLAQNQLMQLKMADM 313
Query: 447 QTQLEAARLLTYNAARLKEHGHEFVKEAAMAKYFASEIAQTLTSKCIDFMGGVGFTRDFP 268
T++ +RLK+ G ++ ++ K + A + K D +GG G ++
Sbjct: 314 LTEISLGLQGCLRVSRLKDEGKVQSEQISIIKRNSCGKALEVARKARDMLGGNGIVDEYH 373
Query: 267 QEKFYRDAKIGTIYEGTSNMQLQTIAKLL 181
+ + + YEGT ++ + + +
Sbjct: 374 IMRHMVNLETVNTYEGTHDVHALILGRAI 402
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 58.8 bits (136), Expect = 3e-09
Identities = 27/49 (55%), Positives = 31/49 (63%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEF 478
KG LN RI I AQM+GL QGC D TIPY ERKQFG ++ +F
Sbjct: 260 KGYKYAIEVLNASRIVIGAQMVGLAQGCFDQTIPYLQERKQFGSRLIDF 308
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3
Query: 637 GEYGKGYKYA 608
GEYGKGYKYA
Sbjct: 256 GEYGKGYKYA 265
>U28943-3|AAT81203.1| 408|Caenorhabditis elegans Hypothetical
protein E04F6.5b protein.
Length = 408
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = -1
Query: 624 KGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQ 445
+G LN GR GI A G + C+ T+ + R QFGKK+ EF I ++ +
Sbjct: 296 EGFKVAMNILNNGRFGIPAACTGAMKHCIQKTVDHITTRVQFGKKLQEFGNIQEKLVEMI 355
Query: 444 TQLEAARLLTYNAARLKEHG-HEFVKEAAMAK 352
++L A + Y + + G E+ EAA+ K
Sbjct: 356 SKLYATESIVYMLSSNMDRGIKEYQLEAAIGK 387
>AL032621-7|CAJ30236.1| 608|Caenorhabditis elegans Hypothetical
protein Y45F3A.3b protein.
Length = 608
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Frame = -1
Query: 633 NMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIA 454
+ +G + + LN RI A +G + + Y+ +R FG+ ++ + +A
Sbjct: 309 DQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLA 368
Query: 453 HLQTQLEAARLLTYNAARL---KEHGHEFVKEAAMA-------KYFASEIAQTLTSKCID 304
++ + LL + AARL E G EA M K +A + A + S+ I+
Sbjct: 369 KMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIE 428
Query: 303 FMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNM 208
GG G+ D RDA++ I+EGT+N+
Sbjct: 429 CFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNV 460
>AL032621-6|CAA21490.1| 617|Caenorhabditis elegans Hypothetical
protein Y45F3A.3a protein.
Length = 617
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 10/152 (6%)
Frame = -1
Query: 633 NMAKGTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIA 454
+ +G + + LN RI A +G + + Y+ +R FG+ ++ + +A
Sbjct: 318 DQGRGVAGISNMLNITRIHNAVASLGYMRRIISLARDYSTKRVVFGQTQSKWPLHTTTLA 377
Query: 453 HLQTQLEAARLLTYNAARL---KEHGHEFVKEAAMA-------KYFASEIAQTLTSKCID 304
++ + LL + AARL E G EA M K +A + A + S+ I+
Sbjct: 378 KMEVDTRGSMLLLFEAARLLGLSEAGKSSDVEAMMLRLITPVLKLYAGKQAVPMVSEGIE 437
Query: 303 FMGGVGFTRDFPQEKFYRDAKIGTIYEGTSNM 208
GG G+ D RDA++ I+EGT+N+
Sbjct: 438 CFGGQGYMEDTGLPTLLRDAQVTPIWEGTTNV 469
>U58756-9|AAC48086.1| 667|Caenorhabditis elegans Hypothetical
protein F58F9.7 protein.
Length = 667
Score = 35.1 bits (77), Expect = 0.043
Identities = 23/73 (31%), Positives = 36/73 (49%)
Frame = -1
Query: 615 STRAGFLNEGRIGIAAQMIGLCQGCMDATIPYTLERKQFGKKIYEFQGISYQIAHLQTQL 436
S G L+ GR+GI A+ + C I Y++ R+QFG +G +I L+ L
Sbjct: 278 SVSLGTLSVGRLGIIAKGMMACTFASTIAIRYSVARRQFG----PVKGAENEIPVLEYPL 333
Query: 435 EAARLLTYNAARL 397
+ RL Y +A +
Sbjct: 334 QQYRLFPYLSAAI 346
>AF022983-1|AAB69946.2| 324|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 16 protein.
Length = 324
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -3
Query: 106 KHLGHLIL*NMFPMLYFKQIHRTYYPGFIVQMCKK 2
KHL H +F ++YF I+ P +I Q KK
Sbjct: 261 KHLDHADYYALFEVIYFVPIYSLIMPAYIYQFSKK 295
>U40797-10|AAK95871.1| 617|Caenorhabditis elegans Gex interacting
protein protein9, isoform a protein.
Length = 617
Score = 27.5 bits (58), Expect = 8.6
Identities = 33/153 (21%), Positives = 59/153 (38%), Gaps = 9/153 (5%)
Frame = -1
Query: 621 GTSTRAGFLNEGRIGIAAQMIGLCQGCMDATIPY---TLERKQFGKKIYEFQGISYQIAH 451
G+ + + GR+ AA IG+ + + + T R+ + + +
Sbjct: 292 GSEIASELVGSGRMPFAAATIGMARRALRELSIWCNRTPSRQNDRTTLADDSRSQRIVTE 351
Query: 450 LQTQLEAARLLTYNAARLKEHGHEFVK--EAAMAKYFASEIAQTLTSKCIDFMGGVGFTR 277
L ++ A Y + L + G V E ++ ++ Q + S ++ +G
Sbjct: 352 LALKVYALESSLYYLSGLIDEGLSVVVDIENSLLSIMTRDVLQAVISAQLELVGVAASDA 411
Query: 276 DFPQEKFYRDAK--IGTIYEGTSNMQ--LQTIA 190
FP EK +RD + I EG Q L TIA
Sbjct: 412 SFPHEKLFRDVTTLLSIIDEGADVEQIGLATIA 444
>U28739-7|AAB93458.1| 681|Caenorhabditis elegans Cell division
cycle related protein14, isoform c protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>U28739-6|AAM54206.1| 695|Caenorhabditis elegans Cell division
cycle related protein14, isoform d protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>U28739-5|AAT68903.1| 707|Caenorhabditis elegans Cell division
cycle related protein14, isoform e protein.
Length = 707
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 581 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 615
>U28739-4|AAM54205.1| 693|Caenorhabditis elegans Cell division
cycle related protein14, isoform a protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division
cycle related protein14, isoform b protein.
Length = 1063
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>AY661747-1|AAT74546.1| 707|Caenorhabditis elegans CDC-14
phosphatase isoform E protein.
Length = 707
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 581 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 615
>AY661746-1|AAT74545.1| 695|Caenorhabditis elegans CDC-14
phosphatase isoform D protein.
Length = 695
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>AY661745-1|AAT74544.1| 681|Caenorhabditis elegans CDC-14
phosphatase isoform C protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14
phosphatase isoform B protein.
Length = 1063
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>AY661743-1|AAT74542.1| 693|Caenorhabditis elegans CDC-14
phosphatase isoform A protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -3
Query: 238 WYNLRGYQQHAVTND---CQIIRKGIHTISAFAPNDL*FIFLSFKAYKHL 98
++NLRGY H + +D ++++K IS + N FI ++K K L
Sbjct: 538 FHNLRGYDSHLIFSDGKSSEMLKKEKVNISCISANIEKFISFNYKFEKTL 587
>AF125961-2|AAD14739.1| 343|Caenorhabditis elegans Serpentine
receptor, class j protein15 protein.
Length = 343
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 367 FFNKLVAVFFQSSGVVC 417
FF KLVA FQS+G +C
Sbjct: 121 FFPKLVASIFQSTGCIC 137
>AF000363-1|AAB94407.1| 681|Caenorhabditis elegans protein
phosphatase CDC14 protein.
Length = 681
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 531 LRPYSPDTDRSSEPRYQSDLRSRNQPAYLYPLPYS 635
++P SP + PRY++ LRS N P+S
Sbjct: 567 IKPMSPSYTDGTSPRYKARLRSENPIGSTTSTPFS 601
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,255,051
Number of Sequences: 27780
Number of extensions: 317186
Number of successful extensions: 844
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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