Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14c05
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 22 4.8
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 4.8
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 4.8
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 4.8
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 6.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 8.5
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 21 8.5
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 21 8.5
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 8.5
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 8.5
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 8.5
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 8.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.5
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E+++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYRKKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E+++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYRKKD-RQYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E+++ D Y K+HN K ++ + +K + + + N
Sbjct: 233 EYRKKD-RQYEKLHNEKEKLLEERTSRKRYSRSREREQN 270
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/39 (23%), Positives = 20/39 (51%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E+++ D Y K+HN K ++ + +K + + + N
Sbjct: 244 EYRKKD-RQYEKLHNEKEKLLEERTSRKRYSRSREREQN 281
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.4
Identities = 6/17 (35%), Positives = 12/17 (70%)
Frame = -1
Query: 659 IYNINLLLFVT*YWLYY 609
I+ ++ +LF YW++Y
Sbjct: 471 IFPVSFMLFNAIYWIFY 487
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 11 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 48
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 233 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 270
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/39 (23%), Positives = 19/39 (48%)
Frame = +3
Query: 120 EFQRTD*TTYHKIHNYKSNVINTKFQQKTILKKKTQNIN 236
E++ D Y K+HN K ++ + +K + + + N
Sbjct: 244 EYKEKD-RRYEKLHNEKEKLLEERTSRKRYSRSREREQN 281
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,573
Number of Sequences: 438
Number of extensions: 3718
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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