Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b24
(622 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000217-1|AAH00217.1| 161|Homo sapiens mitochondrial ribosomal... 85 2e-16
AK126402-1|BAC86542.1| 191|Homo sapiens protein ( Homo sapiens ... 85 2e-16
BC022391-1|AAH22391.1| 161|Homo sapiens mitochondrial ribosomal... 83 8e-16
AC092587-4|AAX88929.1| 161|Homo sapiens unknown protein. 83 8e-16
AB051342-1|BAB54932.1| 68|Homo sapiens mitochondrial ribosomal... 56 1e-07
M63871-1|AAA59984.1| 508|Homo sapiens CYP17 protein. 30 5.7
M31153-1|AAA52140.1| 508|Homo sapiens CYP17 protein. 30 5.7
M19489-1|AAA36405.1| 508|Homo sapiens CYP17 protein. 30 5.7
M14564-1|AAA52151.1| 508|Homo sapiens CYP17 protein. 30 5.7
DQ530598-1|ABF50972.1| 508|Homo sapiens cytochrome P450, family... 30 5.7
BT020000-1|AAV38803.1| 508|Homo sapiens cytochrome P450, family... 30 5.7
BC063388-1|AAH63388.1| 508|Homo sapiens cytochrome P450, family... 30 5.7
BC062997-1|AAH62997.1| 508|Homo sapiens cytochrome P450, family... 30 5.7
AL358790-3|CAI52498.1| 508|Homo sapiens cytochrome P450, family... 30 5.7
>BC000217-1|AAH00217.1| 161|Homo sapiens mitochondrial ribosomal
protein L30 protein.
Length = 161
Score = 85.0 bits (201), Expect = 2e-16
Identities = 42/96 (43%), Positives = 61/96 (63%)
Frame = -2
Query: 432 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 253
DP+ P KL V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI
Sbjct: 59 DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117
Query: 252 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 145
+I P++ P G PT ++++ T LK G+ +V L+P
Sbjct: 118 RIKPLKLPQGLPTEENMSNTCLKSTGELVVQWHLKP 153
>AK126402-1|BAC86542.1| 191|Homo sapiens protein ( Homo sapiens
cDNA FLJ44438 fis, clone UTERU2019940, moderately
similar to Homo sapiens mitochondrial ribosomal protein
L30 (MRPL30). ).
Length = 191
Score = 85.0 bits (201), Expect = 2e-16
Identities = 42/96 (43%), Positives = 61/96 (63%)
Frame = -2
Query: 432 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 253
DP+ P KL V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI
Sbjct: 89 DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 147
Query: 252 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 145
+I P++ P G PT ++++ T LK G+ +V L+P
Sbjct: 148 RIKPLKLPQGLPTEENMSNTCLKSTGELVVQWHLKP 183
>BC022391-1|AAH22391.1| 161|Homo sapiens mitochondrial ribosomal
protein L30 protein.
Length = 161
Score = 83.0 bits (196), Expect = 8e-16
Identities = 41/96 (42%), Positives = 60/96 (62%)
Frame = -2
Query: 432 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 253
DP+ P KL V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI
Sbjct: 59 DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117
Query: 252 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 145
+I P++ P G P ++++ T LK G+ +V L+P
Sbjct: 118 RIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 153
>AC092587-4|AAX88929.1| 161|Homo sapiens unknown protein.
Length = 161
Score = 83.0 bits (196), Expect = 8e-16
Identities = 41/96 (42%), Positives = 60/96 (62%)
Frame = -2
Query: 432 DPEITPSKLFRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 253
DP+ P KL V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI
Sbjct: 59 DPQ-NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLI 117
Query: 252 KITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 145
+I P++ P G P ++++ T LK G+ +V L+P
Sbjct: 118 RIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 153
>AB051342-1|BAB54932.1| 68|Homo sapiens mitochondrial ribosomal
protein L30 protein.
Length = 68
Score = 56.0 bits (129), Expect = 1e-07
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = -2
Query: 309 VVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKENGQCLVTKKLEP 145
V KNIP +NAKL +KHLI+I P++ P G P ++++ T LK G+ +V L+P
Sbjct: 6 VHKNIPSVNAKLKVVKHLIRIKPLKLPQGLPAEENMSNTCLKSTGELVVQWHLKP 60
>M63871-1|AAA59984.1| 508|Homo sapiens CYP17 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>M31153-1|AAA52140.1| 508|Homo sapiens CYP17 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>M19489-1|AAA36405.1| 508|Homo sapiens CYP17 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>M14564-1|AAA52151.1| 508|Homo sapiens CYP17 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>DQ530598-1|ABF50972.1| 508|Homo sapiens cytochrome P450, family
17, subfamily A, polypeptide 1 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>BT020000-1|AAV38803.1| 508|Homo sapiens cytochrome P450, family
17, subfamily A, polypeptide 1 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>BC063388-1|AAH63388.1| 508|Homo sapiens cytochrome P450, family
17, subfamily A, polypeptide 1 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>BC062997-1|AAH62997.1| 508|Homo sapiens cytochrome P450, family
17, subfamily A, polypeptide 1 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
>AL358790-3|CAI52498.1| 508|Homo sapiens cytochrome P450, family
17, subfamily A, polypeptide 1 protein.
Length = 508
Score = 30.3 bits (65), Expect = 5.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -3
Query: 308 WLKIYQKSMLNYGKSSI*LKLHQLNFLMENQLQMI*TTQSLKKMVNAWLQKNWNRNSARS 129
WLKI+ L KS + ++ LN ++EN + + S+ M++ +Q N ++ +
Sbjct: 220 WLKIFPNKTLEKLKSHVKIRNDLLNKILENYKEKF-RSDSITNMLDTLMQAKMNSDNGNA 278
Query: 128 RP 123
P
Sbjct: 279 GP 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,433,977
Number of Sequences: 237096
Number of extensions: 2058226
Number of successful extensions: 4232
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4221
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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