Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b22
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 121 5e-28
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 107 8e-24
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 107 8e-24
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 106 1e-23
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 106 1e-23
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 101 5e-22
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 101 5e-22
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 82 3e-16
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 82 3e-16
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 80 1e-15
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 80 1e-15
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 65 3e-11
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 62 2e-10
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 62 2e-10
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 55 5e-08
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 45 4e-05
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 44 8e-05
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 44 8e-05
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 42 3e-04
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 42 3e-04
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 39 0.002
U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical pr... 37 0.010
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 36 0.022
AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math ... 33 0.16
U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 29 1.9
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 29 3.4
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 29 3.4
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 29 3.4
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 29 3.4
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 4.5
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 27 7.9
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 121 bits (291), Expect = 5e-28
Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
Frame = -1
Query: 607 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASG--P 434
F MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+ +E+ +D M+ EA G P
Sbjct: 21 FAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQP 80
Query: 433 INFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEV 260
INFT LTLF +++ G+D ++V+ NAF+ FDE+ GK++ E LR L T G+++S ++V
Sbjct: 81 INFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQV 139
Query: 259 DEAYDQMDIDDKGYIDTTKLIAML 188
DE + I G D + ML
Sbjct: 140 DELFRDAPIKG-GQFDYVEFTRML 162
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 121 bits (291), Expect = 5e-28
Identities = 62/144 (43%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
Frame = -1
Query: 607 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASG--P 434
F MF Q Q+ EFKEAF ++D ++DG I + DL+ F SLG+ +E+ +D M+ EA G P
Sbjct: 21 FAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQP 80
Query: 433 INFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEV 260
INFT LTLF +++ G+D ++V+ NAF+ FDE+ GK++ E LR L T G+++S ++V
Sbjct: 81 INFTMFLTLFGEKLT-GTDPEEVIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQV 139
Query: 259 DEAYDQMDIDDKGYIDTTKLIAML 188
DE + I G D + ML
Sbjct: 140 DELFRDAPIKG-GQFDYVEFTRML 162
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 107 bits (256), Expect = 8e-24
Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 419
F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A + ++D M+ EASGPINFT
Sbjct: 21 FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80
Query: 418 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 248
LTLF R++ G+D + +I AF FD++ GKI + L L G+ DEV Y
Sbjct: 81 FLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
+ G +D ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 107 bits (256), Expect = 8e-24
Identities = 58/141 (41%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 419
F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A + ++D M+ EASGPINFT
Sbjct: 21 FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80
Query: 418 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 248
LTLF R++ G+D + +I AF FD++ GKI + L L G+ DEV Y
Sbjct: 81 FLTLFGERLT-GTDPEATIIGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
+ G +D ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 106 bits (255), Expect = 1e-23
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 419
F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A + ++D M+ EASGPINFT
Sbjct: 21 FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80
Query: 418 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 248
LTLF R++ G+D + ++ AF FD++ GKI + L L G+ DEV Y
Sbjct: 81 FLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
+ G +D ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 106 bits (255), Expect = 1e-23
Identities = 57/141 (40%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQ 419
F QK + EFKEAF +MD +KDGII K+DL+ + S+G++A + ++D M+ EASGPINFT
Sbjct: 21 FDQKTIQEFKEAFGIMDQNKDGIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTV 80
Query: 418 LLTLFANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAY 248
LTLF R++ G+D + ++ AF FD++ GKI + L L G+ DEV Y
Sbjct: 81 FLTLFGERLT-GTDPEATIVGAFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMY 139
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
+ G +D ++T
Sbjct: 140 KGKPPIEGGEVDYKAFAHLIT 160
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 101 bits (241), Expect = 5e-22
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
Frame = -1
Query: 595 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 428
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 427 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 254
F + LT+ A +M +D ++ + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 253 AYDQMDIDDKGYIDTTKLIAMLT 185
+ DID G ++ + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 101 bits (241), Expect = 5e-22
Identities = 52/143 (36%), Positives = 84/143 (58%), Gaps = 6/143 (4%)
Frame = -1
Query: 595 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPIN 428
+++Q+AEFKEAF L D D DG I +L SLG+ +E EL +M+ E +G I+
Sbjct: 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
Query: 427 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 254
F + LT+ A +M +D ++ + AF+ FD++G I + LRH + G+K + +EVDE
Sbjct: 66 FPEFLTMMARKMK-DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 124
Query: 253 AYDQMDIDDKGYIDTTKLIAMLT 185
+ DID G ++ + + M+T
Sbjct: 125 MIREADIDGDGQVNYEEFVTMMT 147
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 81.8 bits (193), Expect = 3e-16
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Frame = -1
Query: 607 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----AS 440
F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +MV E S
Sbjct: 26 FDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGS 85
Query: 439 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSAD 266
G I+F + + RM+ +D +++ AF+ FD +G I ++ R+ + GD+FS
Sbjct: 86 GTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQ 143
Query: 265 EVDEAYDQMDIDDKGYIDTTKLIAMLTA 182
EVDE ++DID G ID + + +A
Sbjct: 144 EVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 81.8 bits (193), Expect = 3e-16
Identities = 49/148 (33%), Positives = 82/148 (55%), Gaps = 6/148 (4%)
Frame = -1
Query: 607 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----AS 440
F +++++ E+K AF+L D D +G I +L SLG+ +E+EL +MV E S
Sbjct: 26 FDGLNEEEIMEYKAAFRLFDKDGNGSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGS 85
Query: 439 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSAD 266
G I+F + + RM+ +D +++ AF+ FD +G I ++ R+ + GD+FS
Sbjct: 86 GTIDFGEFCQMM-KRMNKEND-SEMIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQ 143
Query: 265 EVDEAYDQMDIDDKGYIDTTKLIAMLTA 182
EVDE ++DID G ID + + +A
Sbjct: 144 EVDEIIAEIDIDGDGQIDYEEFASTFSA 171
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Frame = -1
Query: 589 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFT 422
+++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E +G I F
Sbjct: 78 EEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFP 137
Query: 421 QLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAY 248
+ + M + +++ AF+ FD++G I ++ R+ ++ G +FS +EVDE
Sbjct: 138 EFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 195
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
++D+D G ID + + M++
Sbjct: 196 KEVDVDGDGEIDYEEFVKMMS 216
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -1
Query: 601 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGP 434
M + +EAF++ D D +G+I + R +G SE+E+DEM+ E G
Sbjct: 146 MMKETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGE 205
Query: 433 INFTQLLTLFANR 395
I++ + + + +N+
Sbjct: 206 IDYEEFVKMMSNQ 218
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 79.8 bits (188), Expect = 1e-15
Identities = 42/141 (29%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Frame = -1
Query: 589 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFT 422
+++ EF+EAF + D D +G I +L SLG+ +E+E+ EM+ E +G I F
Sbjct: 21 EEIDEFREAFMMFDKDGNGTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFP 80
Query: 421 QLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAY 248
+ + M + +++ AF+ FD++G I ++ R+ ++ G +FS +EVDE
Sbjct: 81 EFCVMMKRMMK--ETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMI 138
Query: 247 DQMDIDDKGYIDTTKLIAMLT 185
++D+D G ID + + M++
Sbjct: 139 KEVDVDGDGEIDYEEFVKMMS 159
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = -1
Query: 601 MFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGP 434
M + +EAF++ D D +G+I + R +G SE+E+DEM+ E G
Sbjct: 89 MMKETDSEMIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGE 148
Query: 433 INFTQLLTLFANR 395
I++ + + + +N+
Sbjct: 149 IDYEEFVKMMSNQ 161
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 70.1 bits (164), Expect = 1e-12
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 6/143 (4%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 431
F+ +++ EF +AF+L D D + + +L LG +E+EL MV E +G I
Sbjct: 17 FTPEELQEFAQAFKLFDKDGNNTMNIKELGEAMRMLGLNPTEEELLNMVNEYDVDGNGKI 76
Query: 430 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVD 257
+F + + M+ +D++ + + AFK FD++G I ++ +H + T G++FS +EVD
Sbjct: 77 DFGEFCKMM-KEMNKETDQELIRL-AFKVFDKDGNGYITAQEFKHFMTTMGERFSEEEVD 134
Query: 256 EAYDQMDIDDKGYIDTTKLIAML 188
E ++D D ID + + M+
Sbjct: 135 EIIREVDKDGDEQIDLDEFVNMV 157
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPI 431
+S++++ E+++ F + D D+ G I ++L A +LG + ELD+++ E + I
Sbjct: 50 YSEEELQEYRQVFNMFDADRSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQI 109
Query: 430 NFTQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVD 257
+F + + S+ ++VV F FD E G I + R L GD +D
Sbjct: 110 DFDEFCVVMRRLTMKKSNWNEVVKECFTVFDRSENGGISKKDFRFILRELGDITDNQIID 169
Query: 256 EAYDQMDIDDKGYIDTTKLIAML 188
E +++ D+D G ID + M+
Sbjct: 170 EIFNEADVDGNGVIDYDEFTYMV 192
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin related
genes protein 3 protein.
Length = 164
Score = 62.5 bits (145), Expect = 2e-10
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Frame = -1
Query: 595 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG----EASGPIN 428
+++++ EFKEAF L D D +G I +L +LG+ +E+++ E++ + +G +
Sbjct: 24 TEEEIHEFKEAFLLFDKDGNGTISIKELGVAMRALGQNPTEQQMMEIIHDVDLDGNGQVE 83
Query: 427 FTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 254
F + + M + +++ AFK FD +G I + + ++ G F EV+E
Sbjct: 84 FPEFCVMMKRIMK--ETDSEMIREAFKIFDRDGNGVITANEFKLFMINMGMCFDEVEVEE 141
Query: 253 AYDQMDIDDKGYIDTTKLIAMLT 185
+++D D G ID + + + +
Sbjct: 142 MMNEVDCDGNGEIDYEEFVKIFS 164
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = -1
Query: 466 LDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALM 293
++E+ + +G I+F + LT+ A +M G +D ++ + AF+ FD++G I + LRH +
Sbjct: 2 INEVDADGNGTIDFPEFLTVMARKMKG-TDSEEEIREAFRVFDKDGNGFISAAELRHVMT 60
Query: 292 TWGDKFSADEVDEAYDQMDIDDKGYI 215
G+K + +EVDE + DID G I
Sbjct: 61 NLGEKLTDEEVDEMIREADIDGDGQI 86
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/45 (40%), Positives = 29/45 (64%)
Frame = -1
Query: 577 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 443
E +EAF++ D D +G I +LR +LG +++E+DEM+ EA
Sbjct: 34 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA 78
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/144 (20%), Positives = 72/144 (50%), Gaps = 7/144 (4%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPI 431
+++K++ E+++ F + D D G IG +L+ S+G A++ E+D ++ E +G I
Sbjct: 45 YTRKELKEYRQLFNMFDTDGSGAIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEI 104
Query: 430 NFTQLLTLFANRMS-GGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEV 260
+F + + S ++++ F+ FD++ G I ++ +GD F +
Sbjct: 105 DFEEFCACMKKSQNIVKSTNEELIRECFEIFDQDRNGIITENEFKYIAKEFGD-FDDELA 163
Query: 259 DEAYDQMDIDDKGYIDTTKLIAML 188
++ + ++D+ G++ + ++
Sbjct: 164 EKVFRELDVSANGHLSADQFATIV 187
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
Frame = -1
Query: 580 AEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLL 413
AE +E F+ D + DG I + +L LG AS +++ M+ +A +G I+ + L
Sbjct: 7 AEIREVFREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFL 66
Query: 412 TLFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQM 239
+ ++ +E ++ + F FD+ +G I + L + G+K + E E Q
Sbjct: 67 NVLRRQICDPKEERELR-DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQG 125
Query: 238 DIDDKGYIDTTKLIAML 188
D+D G ID + + ++
Sbjct: 126 DLDHDGMIDFQEFVNII 142
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Frame = -1
Query: 589 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFT 422
K+ E ++ F + D + DG+I +DL LG +E E EM+ + G I+F
Sbjct: 77 KEERELRDVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQ 136
Query: 421 QLLTL 407
+ + +
Sbjct: 137 EFVNI 141
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 45.2 bits (102), Expect = 4e-05
Identities = 38/136 (27%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Frame = -1
Query: 577 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLT 410
+ K F+ D + DG I + +LRA +G+ +E ELD M A G I+F + L
Sbjct: 22 DLKGIFREFDLNGDGYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLV 81
Query: 409 LF-ANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDI 233
+ AN +S V D +G I LR A G S ++ Y +D
Sbjct: 82 IAKANPLSLSL---KAVFEELDV-DGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQ 137
Query: 232 DDKGYIDTTKLIAMLT 185
++ G I+ + M+T
Sbjct: 138 NNDGKINFQEFCEMMT 153
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = -1
Query: 577 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 410
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 409 LFA 401
+ +
Sbjct: 156 MMS 158
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 44.0 bits (99), Expect = 8e-05
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Frame = -1
Query: 577 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 410
E +EAF+L D + +G I +DLR +L SE+ELDEM+ E SG ++F + +
Sbjct: 96 ELREAFRLYDKEGNGYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFME 155
Query: 409 LFA 401
+ +
Sbjct: 156 MMS 158
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 41.9 bits (94), Expect = 3e-04
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Frame = -1
Query: 571 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 419
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 418 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 254
L ++ A G+ D K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123
Query: 253 AYDQMDIDDKGYIDTTKLIAMLTA 182
++ D +G + I + A
Sbjct: 124 LLKGVE-DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 41.9 bits (94), Expect = 3e-04
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 14/144 (9%)
Frame = -1
Query: 571 KEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEASGP---------INFTQ 419
KE F L D + DG I + + R A K MV +A+G + F +
Sbjct: 10 KEIFNLYDEELDGKIDGTQV----GDVARAAGLKPTQAMVTKAAGQEFKRKGEKRLTFEE 65
Query: 418 LLTLF---ANRMSGGSDEDDVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDE 254
L ++ A G+ D K FD+E GKI + LRH L+ G++ SADE DE
Sbjct: 66 WLPMYEQLAKEKEQGTYAD--FYEGLKVFDKEETGKILAAELRHILLALGERLSADEADE 123
Query: 253 AYDQMDIDDKGYIDTTKLIAMLTA 182
++ D +G + I + A
Sbjct: 124 LLKGVE-DGEGMVKYEDFIKKVLA 146
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Frame = -1
Query: 583 VAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVG--EASGPINFTQLLT 410
+A+ +E F D D I + +LG+ +E E+ + VG + ++F +
Sbjct: 4 LADCREVFAYFDSKGDERISVQQVGDVLRALGQNPTEAEIHKCVGSFDREARLSFEDFVP 63
Query: 409 LFANRMSGGSDEDDV--VINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDE 254
+F + +S ++ V + FD+EG I+ LRH L T G++ S ++VD+
Sbjct: 64 IFQS-VSKNREKHTVEEFVEGLSHFDKEGNGMINVAELRHLLTTLGERLSDEDVDQ 118
>Z70753-8|CAA94763.1| 137|Caenorhabditis elegans Hypothetical
protein F40F9.8 protein.
Length = 137
Score = 39.5 bits (88), Expect = 0.002
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 6/121 (4%)
Frame = -1
Query: 556 LMDHDKDGIIGKNDLRATFDSLGRLASEKEL---DEMVGEASGPINFTQLLTLFANRMSG 386
+ D D DG+I +D+ S G S+ EL E + +G ++F LL +
Sbjct: 1 MFDEDSDGLIETDDVSHVLRSFGLNPSQTELQLVSEQTAKKNGRVSFDDLLPRVVLAIQN 60
Query: 385 GSDEDDV---VINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYI 215
+DD + AF+ + + L L + G+ + EV + + + I G I
Sbjct: 61 EEWKDDTPKQIHAAFQVITSNNYVQKDTLLQLLTSIGEPLTPQEVKQFLNHVSIRANGDI 120
Query: 214 D 212
D
Sbjct: 121 D 121
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 39.1 bits (87), Expect = 0.002
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -1
Query: 607 FXMFSQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASE---KELDEMVGE-AS 440
F FS+KQ+ F F+ D D+D I N+L+ + LG + KEL + V E
Sbjct: 535 FSEFSRKQIQYFSGIFKKYDEDQDSYIDFNELKRMMEKLGEAQTHIALKELIKKVDEDQD 594
Query: 439 GPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSE 314
G I+ + +F SG +V FKT E + E
Sbjct: 595 GKISQREFFLIFRLAASGELSCSEV----FKTLAESVDVSKE 632
>U40427-2|AAA81468.2| 159|Caenorhabditis elegans Hypothetical
protein F43C9.2 protein.
Length = 159
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Frame = -1
Query: 577 EFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLT 410
+ E F L+D DKDG + +N++ A ++ + ELD + GE +G I+ + +
Sbjct: 23 QLSETFDLLDVDKDGRLSRNEIAALLRTINVEPTRVELDFIFGEMDTDKTGKISKEEFVN 82
Query: 409 LFANRMSGGSDEDDVVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMD 236
+ + ++ + F+ FD +G I + + L D + + + D
Sbjct: 83 YMKSPPIHRTTLRELEVQ-FRKFDSDGDGAITEDEMAEILRRTADLGDRAAISDMFKATD 141
Query: 235 IDDKGYIDTTKLIAML 188
++ G I + + M+
Sbjct: 142 LNGDGKITFFEFVKMM 157
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 8/134 (5%)
Frame = -1
Query: 592 QKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMV----GEASGPINF 425
+ ++ E+K AF D + DG I ++L G+ ++ EL ++ + +G I F
Sbjct: 124 KNKIEEYKRAFNFFDANNDGRITIDELEKAMQKCGQKPTKLELRLIMYHGDNDQNGVITF 183
Query: 424 TQLLTLFANRMSGGSDEDDVVINAFKTF--DEEGKIDSERLRHAL--MTWGDKFSADEVD 257
+ L S D + F F D++G I+ + + ++ F V+
Sbjct: 184 DEFAHLMNGTASMNQYTYDQLREQFDMFDKDKDGFIEKMEMLSIVRELSLQASFPRQVVE 243
Query: 256 EAYDQMDIDDKGYI 215
+ +++ DID G I
Sbjct: 244 QLFNEADIDGDGKI 257
>AF098504-1|AAC67412.1| 364|Caenorhabditis elegans Btb and math
domain containingprotein 25 protein.
Length = 364
Score = 33.1 bits (72), Expect = 0.16
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -1
Query: 589 KQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLGRLASEKELDEMVGEA 443
K E ++ FQ +D D DG I +L+A +L +E+E+D+ + A
Sbjct: 276 KTEEEIRKVFQDLDKDGDGFISVAELQAVMTNLQAWLTEEEIDDGIRSA 324
>U97405-6|AAB53013.2| 142|Caenorhabditis elegans Hypothetical
protein T09B4.4 protein.
Length = 142
Score = 29.9 bits (64), Expect = 1.5
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = -1
Query: 598 FSQKQVAEFKEAFQLMDHDKDGII-GKNDLRATFDSLGRLASEKELDEMVGEAS-GPINF 425
FSQKQ+ E +E F + G++ + LR SLG + + D + + PI F
Sbjct: 5 FSQKQIDEIRECFNF--YSTSGVLRTDSQLRCALRSLGYSPTASKTDIYFKKLNKKPIEF 62
Query: 424 TQLLTLFANRMSGGSDEDDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVDEA 251
L + + + + + +I A D + + S L L G++ S +E+
Sbjct: 63 ATFLDICKDEQNSPNPLTE-IIKALSGLDRNKTRAMPSRELAAILSHVGEQMSPEEIKYL 121
Query: 250 YDQMDID 230
+++++
Sbjct: 122 LSKVEVN 128
>Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical
protein B0513.5 protein.
Length = 616
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -1
Query: 337 EEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYID 212
+EG++ S+ L G K + V + +D++D D G +D
Sbjct: 283 QEGRLTSQEFYKRLGELGVKTDTESVKKFFDEVDFDSDGIVD 324
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = -1
Query: 328 KIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKL 200
K +S L A++T+GD F+ VD +DID ++ T KL
Sbjct: 34 KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = -1
Query: 430 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALM 293
NF +++ ANRM G ++ +V+ F+T + E ++ + L L+
Sbjct: 171 NFAKMVKPVANRMIDGMNKQVLVVRRFETNETELPLNLDELEQGLL 216
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 28.7 bits (61), Expect = 3.4
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = -1
Query: 595 SQKQVAEFKEAFQLMDHDKDGIIGKNDLRATFDSLG-RLASEKELDEMVG--EASGPINF 425
++KQ+ EFK AF D +K+G + S G + E L E + + S
Sbjct: 227 TEKQLHEFKLAFDYFDQEKNGWLDYEHFELCLKSQGYNFSVESTLKETMSLLDPSTYEKH 286
Query: 424 TQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 245
+ + + + D+ + +A K D KI R + K A + + + D
Sbjct: 287 DYMRYMVKHETTNILDDHSAIEDALKNLDAR-KISDSMSRKEAEFFMSKI-AKKAETSSD 344
Query: 244 QMDIDDKGYIDT 209
Q+ ++ K ++++
Sbjct: 345 QVCLEYKDFVNS 356
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 28.7 bits (61), Expect = 3.4
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -2
Query: 159 VKPRNDSISTIRSKTPAAVITPGHGS 82
+KPR+D I T + TP AV T +GS
Sbjct: 582 LKPRSDDIPTTSTSTPMAVETKPNGS 607
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 565 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 458
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = -1
Query: 565 AFQLMDHDKDGIIGKNDLRATFDSLGRL-ASEKELDE 458
AF+L D D+DG I +N++ + DS+ ++ S +L E
Sbjct: 104 AFKLYDLDQDGFITRNEMLSIVDSIYKMVGSSVQLPE 140
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 409 LFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYD 245
+ N M D DDVV N + D+ GKID ++ AD DE +
Sbjct: 710 MLENEMDEEDDGDDVVENDAEKIDKSGKIDKIDSDDDEEADDEELEADVTDEVVE 764
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = -1
Query: 499 DSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE 332
D LG+ A+ ++ VG+ + FT L LF ++ E D+ + ++ +E+
Sbjct: 186 DELGKFATMFSSNQEVGDHVRKMKFTLLNPLFVQKLFSNIKEGDIPVLMVRSGEEK 241
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 298 LMTWGDKFSADEVDE 254
L WGDK+S DE++E
Sbjct: 625 LQLWGDKYSIDEIEE 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,977,411
Number of Sequences: 27780
Number of extensions: 193530
Number of successful extensions: 764
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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