Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b14
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 204 2e-52
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 111 2e-24
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 111 2e-24
AK098225-1|BAC05263.1| 236|Homo sapiens protein ( Homo sapiens ... 29 9.5
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 204 bits (498), Expect = 2e-52
Identities = 96/173 (55%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIG-CPGDDA 241
+WI+ NGG M +L++ K+ IY I+ S GFY PV RSKMN+PFRIG GDDA
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDA 315
Query: 240 LEKEFLKGAETLGLIQLKGHRDVGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
LEK FL A L ++ LKGHR VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 316 LEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 368
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 111 bits (266), Expect = 2e-24
Identities = 49/94 (52%), Positives = 68/94 (72%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 316
+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -1
Query: 174 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 111 bits (266), Expect = 2e-24
Identities = 49/94 (52%), Positives = 68/94 (72%)
Frame = -1
Query: 597 AGAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVL 418
AGAQKN+G++GV +VIVR+DLL AL CPS+L++ +S+ NTPP F+IY+MG VL
Sbjct: 196 AGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVL 255
Query: 417 QWIQRNGGLEGMSQLATKKASLIYNTIEQSNGFY 316
+WI+ NGG M +L++ K+ IY I+ S GFY
Sbjct: 256 EWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFY 289
Score = 46.0 bits (104), Expect = 1e-04
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = -1
Query: 174 VGGIRASIYNAVTLEEVQALVQYMEEFYKKH 82
VGGIRAS+YNAVT+E+VQ L +M++F + H
Sbjct: 292 VGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 322
>AK098225-1|BAC05263.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ40906 fis, clone UTERU2004698, highly similar to
Mus musculus mRNA for thrombospondin type 1 domain. ).
Length = 236
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 298 KCSQ*NECAIQNWLPW**CLRKRILEGC*DFGTYSAKRTQR 176
+CS +C + W PW C +K+ L G F S +RT+R
Sbjct: 114 ECSSPAQCEVSEWSPWGPCSKKQQLCG---FRRGSEERTRR 151
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,752,586
Number of Sequences: 237096
Number of extensions: 2003182
Number of successful extensions: 7701
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7679
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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