Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b07
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094929-1|AAM11282.1| 204|Drosophila melanogaster RH49505p pro... 153 2e-37
AE014297-1036|AAF54447.1| 204|Drosophila melanogaster CG9471-PA... 152 5e-37
AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p pro... 31 1.1
AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA... 31 1.1
AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-P... 30 3.5
AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p pro... 29 4.6
AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB... 29 4.6
AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA... 29 4.6
AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD2383... 29 8.1
AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA ... 29 8.1
>AY094929-1|AAM11282.1| 204|Drosophila melanogaster RH49505p
protein.
Length = 204
Score = 153 bits (371), Expect = 2e-37
Identities = 73/172 (42%), Positives = 104/172 (60%)
Frame = -1
Query: 697 RDPAKLPEHLXDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNI 518
R +PE KVE+VKG+V + V +EG DAV + LGTRN L T++LS GT+N+
Sbjct: 33 RSEKTVPERFKSKVELVKGDVTNYEDVQRVIEGVDAVAVILGTRNKLEATTELSRGTENL 92
Query: 517 IDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHF 338
I AM+ + S +S+FL +VP +F LNE+H+RM K L+WIA PPH
Sbjct: 93 IKAMKEAKLTKFSIVMSSFLLRPLNEVPTVFHRLNEEHQRMLDLTKACDLDWIAILPPHI 152
Query: 337 TDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKYYKAVIGICNVPK 182
D+P+ V E+ PGR ++K DLG F++D+L +P++Y+ V GI PK
Sbjct: 153 ADEPA--TAYTVLHEEAPGRLVSKYDLGKFIIDSLEQPEHYRKVCGIGKSPK 202
>AE014297-1036|AAF54447.1| 204|Drosophila melanogaster CG9471-PA
protein.
Length = 204
Score = 152 bits (368), Expect = 5e-37
Identities = 72/172 (41%), Positives = 104/172 (60%)
Frame = -1
Query: 697 RDPAKLPEHLXDKVEIVKGNVLEPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNI 518
R +PE KVE+VKG+V + V +EG DAV + LGTRN L T++LS GT+N+
Sbjct: 33 RSEKTVPERFKSKVELVKGDVTNYEDVQRVIEGVDAVAVILGTRNKLEATTELSRGTENL 92
Query: 517 IDAMRAKNVKTVSACLSAFLFYEQEKVPPIFVNLNEDHKRMFQALKDSGLNWIAAFPPHF 338
I AM+ + S +S+FL +VP +F LNE+H+RM K L+WIA PPH
Sbjct: 93 IKAMKEAKLTKFSIVMSSFLLRPLNEVPTVFHRLNEEHQRMLDLTKACDLDWIAILPPHI 152
Query: 337 TDDPSREMIIEVNPEKTPGRTIAKCDLGTFLVDALSEPKYYKAVIGICNVPK 182
D+P+ V ++ PGR ++K DLG F++D+L +P++Y+ V GI PK
Sbjct: 153 ADEPA--TAYTVLHDEAPGRLVSKYDLGKFIIDSLEQPEHYRKVCGIGKSPK 202
>AY060800-1|AAL28348.1| 985|Drosophila melanogaster GH26463p
protein.
Length = 985
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/94 (31%), Positives = 44/94 (46%)
Frame = +3
Query: 411 SFKLTKIGGTFSCS*NKNADKQADTVLTFFALIASIMFLVPSDKSEVGARSFLVPRVMTT 590
S L G F C + D D +LT + AS F P+D+ EVG++S + +
Sbjct: 390 SCNLENSSGLF-CDLRQPDDCTIDDILT--PVNASNSF--PADEFEVGSQSQVNESSLDK 444
Query: 591 ASVPSTASCTESGSRTFPLTISTLSLRCSGSFAG 692
A ST +C SGS +S++ +GSF G
Sbjct: 445 AKSASTETCDASGSNPATRLLSSI----NGSFVG 474
>AE013599-3767|AAF47129.2| 985|Drosophila melanogaster CG3105-PA
protein.
Length = 985
Score = 31.5 bits (68), Expect = 1.1
Identities = 30/94 (31%), Positives = 44/94 (46%)
Frame = +3
Query: 411 SFKLTKIGGTFSCS*NKNADKQADTVLTFFALIASIMFLVPSDKSEVGARSFLVPRVMTT 590
S L G F C + D D +LT + AS F P+D+ EVG++S + +
Sbjct: 390 SCNLENSSGLF-CDLRQPDDCTIDDILT--PVNASNSF--PADEFEVGSQSQVNESSLDK 444
Query: 591 ASVPSTASCTESGSRTFPLTISTLSLRCSGSFAG 692
A ST +C SGS +S++ +GSF G
Sbjct: 445 AKSASTETCDASGSNPATRLLSSI----NGSFVG 474
>AE014297-3155|AAF55996.2| 2059|Drosophila melanogaster CG12499-PA
protein.
Length = 2059
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 305 FNNHFSAWVVCEVWRKRGDPI*AAVFQSLEHSLVVFVQIDEDRRHLFLFIK 457
++N+ +A V E +K G+ + F L H LV F I+ L++FIK
Sbjct: 556 YSNYMNAIAVREQSKKAGNSLRKFKFDLLNHLLVHFPTIESILYSLYMFIK 606
>AY119584-1|AAM50238.1| 534|Drosophila melanogaster LD14064p
protein.
Length = 534
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -1
Query: 631 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 452
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 451 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 356
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
>AE014296-1373|AAS65055.1| 534|Drosophila melanogaster CG7942-PB,
isoform B protein.
Length = 534
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -1
Query: 631 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 452
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 451 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 356
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
>AE014296-1372|AAF50486.1| 534|Drosophila melanogaster CG7942-PA,
isoform A protein.
Length = 534
Score = 29.5 bits (63), Expect = 4.6
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Frame = -1
Query: 631 EPDSVHEAVEGTDAVVITLGTRNDLAPTSDLSEGTKNIIDAMRAKNVKTVSACLSAFLFY 452
E + +++ +EG + V GT+ DL + T+N+ D K S + +Y
Sbjct: 12 ELERIYDTIEGIEKVG---GTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFYKYY 68
Query: 451 EQEKVPP---IFVNLNEDHKRMFQALKDSGLNWIA 356
E V P IF+ N + Q L G W+A
Sbjct: 69 SGELVAPVLTIFIGGNHEASNYLQELPYGG--WVA 101
>AF181654-1|AAD55439.1| 652|Drosophila melanogaster BcDNA.LD23830
protein.
Length = 652
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 78 SYIEKITRKKM*KYPFNLTTYWIY*TNNDYRFL 176
S+I KITR + P+ TT +Y + DY++L
Sbjct: 183 SFINKITRADVEVQPYAFTTKSLYVGHTDYKYL 215
>AE013599-854|AAF58945.1| 652|Drosophila melanogaster CG8801-PA
protein.
Length = 652
Score = 28.7 bits (61), Expect = 8.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 78 SYIEKITRKKM*KYPFNLTTYWIY*TNNDYRFL 176
S+I KITR + P+ TT +Y + DY++L
Sbjct: 183 SFINKITRADVEVQPYAFTTKSLYVGHTDYKYL 215
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,110,970
Number of Sequences: 53049
Number of extensions: 691119
Number of successful extensions: 2097
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2095
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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