Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b06
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 373 e-103
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 373 e-103
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 373 e-103
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 372 e-103
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 372 e-103
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 372 e-103
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 372 e-103
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 372 e-103
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 338 8e-93
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 191 2e-48
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.002
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.014
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 6.5
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 373 bits (917), Expect = e-103
Identities = 167/208 (80%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 373 bits (917), Expect = e-103
Identities = 167/208 (80%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 373 bits (917), Expect = e-103
Identities = 167/208 (80%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 372 bits (916), Expect = e-103
Identities = 166/208 (79%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 372 bits (916), Expect = e-103
Identities = 166/208 (79%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 372 bits (916), Expect = e-103
Identities = 166/208 (79%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 372 bits (916), Expect = e-103
Identities = 166/208 (79%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 372 bits (916), Expect = e-103
Identities = 166/208 (79%), Positives = 187/208 (89%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 28 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 87
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTR 315
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TR
Sbjct: 88 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTR 147
Query: 314 VKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPV 135
VKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV
Sbjct: 148 VKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPV 207
Query: 134 EHPHGGGNHQHIGKASTVKRGTSAGRKV 51
EHP GGGNHQHIGK ST++R AGRKV
Sbjct: 208 EHPFGGGNHQHIGKPSTIRRDAPAGRKV 235
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 338 bits (832), Expect = 8e-93
Identities = 152/189 (80%), Positives = 168/189 (88%)
Frame = -1
Query: 617 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 438
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 437 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 258
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 257 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 78
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 77 RGTSAGRKV 51
R AGRKV
Sbjct: 181 RDAPAGRKV 189
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 191 bits (465), Expect = 2e-48
Identities = 85/107 (79%), Positives = 97/107 (90%)
Frame = -1
Query: 674 KLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQF 495
+LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQF
Sbjct: 24 RLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQF 83
Query: 494 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 354
VYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 84 VYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 42.3 bits (95), Expect = 0.002
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = -1
Query: 647 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 480
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 479 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 303
A G+ P+GA+P GT++ N+E + G + RA+G ++ + ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLP 229
Query: 302 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = -1
Query: 647 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 480
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 479 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 303
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 302 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = -1
Query: 647 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 480
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 479 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 303
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 302 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -1
Query: 545 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 381
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 380 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 204
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 6.5
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1
Query: 175 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 270
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,951,724
Number of Sequences: 237096
Number of extensions: 2803147
Number of successful extensions: 6463
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6461
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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