Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b05
(692 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF181648-1|AAD55434.1| 783|Drosophila melanogaster BcDNA.GH1255... 126 2e-29
AE014134-1659|AAN10698.1| 744|Drosophila melanogaster CG4389-PC... 126 2e-29
AE014134-1658|AAN10697.1| 744|Drosophila melanogaster CG4389-PB... 126 2e-29
AE014134-1657|AAF52789.1| 783|Drosophila melanogaster CG4389-PA... 126 2e-29
BT009948-1|AAQ22417.1| 315|Drosophila melanogaster RH68464p pro... 66 3e-11
AE014298-2360|AAF48586.2| 315|Drosophila melanogaster CG9914-PA... 66 3e-11
BT015982-1|AAV36867.1| 315|Drosophila melanogaster RE67096p pro... 56 3e-08
AY069189-1|AAL39334.1| 296|Drosophila melanogaster GH23990p pro... 56 3e-08
AE013599-1926|AAF58227.1| 315|Drosophila melanogaster CG10131-P... 56 3e-08
AY113421-1|AAM29426.1| 511|Drosophila melanogaster RE18828p pro... 29 7.9
AE014296-2738|AAF49463.1| 511|Drosophila melanogaster CG4573-PA... 29 7.9
>AF181648-1|AAD55434.1| 783|Drosophila melanogaster BcDNA.GH12558
protein.
Length = 783
Score = 126 bits (305), Expect = 2e-29
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ +VKH++ K+L+ V P H + A+NTS++ I +IA+ R +K G+H+F+PV M+
Sbjct: 460 VFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPVDKMQ 519
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T + G GK IT D PGF R+L + EAIRL + G
Sbjct: 520 LLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEG-V 578
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
+D+D K G+P+G LAD VG+D I K F ++ + ++ LV
Sbjct: 579 DPKDLDQYTK-KFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLA 637
Query: 150 GKLGVKTGEG 121
G LG K+G+G
Sbjct: 638 GFLGRKSGKG 647
>AE014134-1659|AAN10698.1| 744|Drosophila melanogaster CG4389-PC,
isoform C protein.
Length = 744
Score = 126 bits (305), Expect = 2e-29
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ +VKH++ K+L+ V P H + A+NTS++ I +IA+ R +K G+H+F+PV M+
Sbjct: 421 VFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPVDKMQ 480
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T + G GK IT D PGF R+L + EAIRL + G
Sbjct: 481 LLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEG-V 539
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
+D+D K G+P+G LAD VG+D I K F ++ + ++ LV
Sbjct: 540 DPKDLDQYTK-KFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLA 598
Query: 150 GKLGVKTGEG 121
G LG K+G+G
Sbjct: 599 GFLGRKSGKG 608
>AE014134-1658|AAN10697.1| 744|Drosophila melanogaster CG4389-PB,
isoform B protein.
Length = 744
Score = 126 bits (305), Expect = 2e-29
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ +VKH++ K+L+ V P H + A+NTS++ I +IA+ R +K G+H+F+PV M+
Sbjct: 421 VFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPVDKMQ 480
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T + G GK IT D PGF R+L + EAIRL + G
Sbjct: 481 LLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEG-V 539
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
+D+D K G+P+G LAD VG+D I K F ++ + ++ LV
Sbjct: 540 DPKDLDQYTK-KFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLA 598
Query: 150 GKLGVKTGEG 121
G LG K+G+G
Sbjct: 599 GFLGRKSGKG 608
>AE014134-1657|AAF52789.1| 783|Drosophila melanogaster CG4389-PA,
isoform A protein.
Length = 783
Score = 126 bits (305), Expect = 2e-29
Identities = 70/190 (36%), Positives = 107/190 (56%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ +VKH++ K+L+ V P H + A+NTS++ I +IA+ R +K G+H+F+PV M+
Sbjct: 460 VFEDIKVKHRVIKELEAVVPEHCVIATNTSAIPITKIAAGSSRPEKVVGMHYFSPVDKMQ 519
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T + G GK IT D PGF R+L + EAIRL + G
Sbjct: 520 LLEIITHPGTSKDTIAQAVAVGLKQGKVVITVGDGPGFYTTRILSTMLSEAIRLLQEG-V 578
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
+D+D K G+P+G LAD VG+D I K F ++ + ++ LV
Sbjct: 579 DPKDLDQYTK-KFGFPVGAATLADEVGIDVGSHIAVDLAKAFGERFSGGNLEVMNDLVLA 637
Query: 150 GKLGVKTGEG 121
G LG K+G+G
Sbjct: 638 GFLGRKSGKG 647
>BT009948-1|AAQ22417.1| 315|Drosophila melanogaster RH68464p
protein.
Length = 315
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
I E ++K L+KQLD V +TI +S+TS+ + ++ +K K H NP +
Sbjct: 94 IPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKANVLVSHPVNPPYYVP 153
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCIT-CKDTPGFVVNRLLVPYICEAIRLYERGD 334
L+E+V T K + +G+ +T ++ GF +NR+ + E RL E G
Sbjct: 154 LVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQYAILNETWRLVEAGI 213
Query: 333 ASARDIDIAMKLGAG--YP-MGPLELA 262
+ +DID M G G Y +GPLE A
Sbjct: 214 LNVKDIDSVMSNGLGPRYAFLGPLETA 240
>AE014298-2360|AAF48586.2| 315|Drosophila melanogaster CG9914-PA
protein.
Length = 315
Score = 66.5 bits (155), Expect = 3e-11
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 4/147 (2%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
I E ++K L+KQLD V +TI +S+TS+ + ++ +K K H NP +
Sbjct: 94 IPERLDLKKALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKANVLVSHPVNPPYYVP 153
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCIT-CKDTPGFVVNRLLVPYICEAIRLYERGD 334
L+E+V T K + +G+ +T ++ GF +NR+ + E RL E G
Sbjct: 154 LVEIVPAPWTKPEWVKKTRALMEEIGQKPVTLSREIEGFALNRIQYAILNETWRLVEAGI 213
Query: 333 ASARDIDIAMKLGAG--YP-MGPLELA 262
+ +DID M G G Y +GPLE A
Sbjct: 214 LNVKDIDSVMSNGLGPRYAFLGPLETA 240
>BT015982-1|AAV36867.1| 315|Drosophila melanogaster RE67096p
protein.
Length = 315
Score = 56.4 bits (130), Expect = 3e-08
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E +K L+ QLD + T+ AS+TS+ + + ++++ + H NP +
Sbjct: 92 VPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEGLQKRQQMLVAHPLNPPYFIP 151
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYICEAIRLYERGD 334
L+E+V TS + + + S+G+ +T K + GF NR+ + E RL G
Sbjct: 152 LVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQYAILNEVWRLVGSGI 211
Query: 333 ASARDIDIAMKLGAGYP---MGPLELA 262
S D+D + G G +G LE A
Sbjct: 212 LSVADVDRVLSQGLGLRYALLGSLETA 238
>AY069189-1|AAL39334.1| 296|Drosophila melanogaster GH23990p
protein.
Length = 296
Score = 56.4 bits (130), Expect = 3e-08
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E +K L+ QLD + T+ AS+TS+ + + ++++ + H NP +
Sbjct: 73 VPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEGLQKRQQMLVAHPLNPPYFIP 132
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYICEAIRLYERGD 334
L+E+V TS + + + S+G+ +T K + GF NR+ + E RL G
Sbjct: 133 LVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQYAILNEVWRLVGSGI 192
Query: 333 ASARDIDIAMKLGAGYP---MGPLELA 262
S D+D + G G +G LE A
Sbjct: 193 LSVADVDRVLSQGLGLRYALLGSLETA 219
>AE013599-1926|AAF58227.1| 315|Drosophila melanogaster CG10131-PA
protein.
Length = 315
Score = 56.4 bits (130), Expect = 3e-08
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 4/147 (2%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E +K L+ QLD + T+ AS+TS+ + + ++++ + H NP +
Sbjct: 92 VPEVLHLKKSLYSQLDELLEEQTVVASSTSTFMPSLYSEGLQKRQQMLVAHPLNPPYFIP 151
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYICEAIRLYERGD 334
L+E+V TS + + + S+G+ +T K + GF NR+ + E RL G
Sbjct: 152 LVEIVPAPWTSPSAVERTRDLMLSLGQRPVTLKREIQGFATNRIQYAILNEVWRLVGSGI 211
Query: 333 ASARDIDIAMKLGAGYP---MGPLELA 262
S D+D + G G +G LE A
Sbjct: 212 LSVADVDRVLSQGLGLRYALLGSLETA 238
>AY113421-1|AAM29426.1| 511|Drosophila melanogaster RE18828p
protein.
Length = 511
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -3
Query: 657 FKQLDGVAP-SHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVP--VMRLLEVVKGS 487
FK D P I+ ++S NE VV + D+F HF N V +M + V++G
Sbjct: 173 FKLTDHEEPLDDLIYGKVHHNVSDNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGV 232
Query: 486 ETSEATYKTMM 454
E +T K ++
Sbjct: 233 EWQISTTKHLL 243
>AE014296-2738|AAF49463.1| 511|Drosophila melanogaster CG4573-PA
protein.
Length = 511
Score = 28.7 bits (61), Expect = 7.9
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -3
Query: 657 FKQLDGVAP-SHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVP--VMRLLEVVKGS 487
FK D P I+ ++S NE VV + D+F HF N V +M + V++G
Sbjct: 173 FKLTDHEEPLDDLIYGKVHHNVSDNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGV 232
Query: 486 ETSEATYKTMM 454
E +T K ++
Sbjct: 233 EWQISTTKHLL 243
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,981,375
Number of Sequences: 53049
Number of extensions: 645611
Number of successful extensions: 1306
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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