Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14b05
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 264 3e-71
Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical pr... 254 3e-68
AF039046-12|AAB94215.1| 299|Caenorhabditis elegans Hydroxy-acyl... 200 6e-52
AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical ... 127 9e-30
AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical ... 127 9e-30
AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical ... 127 9e-30
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 120 7e-28
Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical pr... 100 9e-22
AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical... 60 1e-09
AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical... 60 1e-09
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 3.2
U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical pr... 28 5.5
U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical pr... 28 5.5
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 264 bits (648), Expect = 3e-71
Identities = 118/191 (61%), Positives = 152/191 (79%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
I EN ++K KLF +++ A T+ +NTSSL + +I +K K +FGGLHFFNPVP+M+
Sbjct: 115 IVENIDIKRKLFAEVEVAAKPTTLITTNTSSLRLADIGLNLKDKSRFGGLHFFNPVPMMK 174
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLEVV+ +ETS+AT+ ++++GK+VGKT + CKDTPGF+VNRLLVPY+ EA+RLYERGDA
Sbjct: 175 LLEVVRHTETSDATFNQLVDYGKTVGKTTVACKDTPGFIVNRLLVPYMFEALRLYERGDA 234
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
S DID+AMKLGAGYPMGP EL+DYVGLDT KFI+DGWH ++P++ F P PLL LV
Sbjct: 235 SMEDIDVAMKLGAGYPMGPFELSDYVGLDTCKFIMDGWHAQYPEEVAFTPSPLLNSLVDS 294
Query: 150 GKLGVKTGEGF 118
GK G K+GEGF
Sbjct: 295 GKNGRKSGEGF 305
>Z22178-1|CAA80153.1| 298|Caenorhabditis elegans Hypothetical
protein F54C8.1 protein.
Length = 298
Score = 254 bits (623), Expect = 3e-68
Identities = 111/189 (58%), Positives = 149/189 (78%)
Frame = -3
Query: 684 ENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLL 505
EN ++K +F Q++ +I +NTSS + ++A ++ K +FGGLHFFNPVPVM+LL
Sbjct: 105 ENIDLKRGIFAQIEQSCKKDSILTTNTSSFLLEDVAKGLQDKTRFGGLHFFNPVPVMKLL 164
Query: 504 EVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDASA 325
EV++ +TS+ TY T++++G +VGKT + CKD+PGF+VNRLL+PY EA R+YERGDAS
Sbjct: 165 EVIRSDDTSDETYATLIKFGTAVGKTTVACKDSPGFIVNRLLIPYFFEAARMYERGDASM 224
Query: 324 RDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAEGK 145
DID AMKLGAG+PMGP ELADY+GLDT KF++DGW K+P+ QLF+ PL++KLVAEGK
Sbjct: 225 TDIDEAMKLGAGHPMGPFELADYIGLDTVKFVMDGWAAKYPEVQLFEASPLVDKLVAEGK 284
Query: 144 LGVKTGEGF 118
LG KTG+GF
Sbjct: 285 LGRKTGDGF 293
>AF039046-12|AAB94215.1| 299|Caenorhabditis elegans
Hydroxy-acyl-coa dehydrogenaseprotein 1 protein.
Length = 299
Score = 200 bits (489), Expect = 6e-52
Identities = 92/191 (48%), Positives = 128/191 (67%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ EN ++K +F+ + P + + +NTSSL ++++ V++ F GLHFFNPVPVM+
Sbjct: 106 VAENLDLKLDIFQTIQKTCPQNCMLITNTSSLKLSQMLPVIQNPALFAGLHFFNPVPVMK 165
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
L+EVV ETS T + + K + K + KDTPGF+VNRLL+PY+ ++IR+ ERGDA
Sbjct: 166 LVEVVSTDETSPETTNFLFNFCKEIKKLPVAAKDTPGFIVNRLLIPYLMDSIRMLERGDA 225
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
+ DID AM+ G YPMGP+EL DYVGLD + L + + P F PIPL++KLVAE
Sbjct: 226 TKEDIDTAMRFGTSYPMGPIELCDYVGLDVLQSTLKIFRETIPGDARFAPIPLMDKLVAE 285
Query: 150 GKLGVKTGEGF 118
GKLG KT +GF
Sbjct: 286 GKLGRKTKQGF 296
>AF000263-3|AAL77185.1| 697|Caenorhabditis elegans Hypothetical
protein T08B2.7c protein.
Length = 697
Score = 127 bits (306), Expect = 9e-30
Identities = 73/190 (38%), Positives = 103/190 (54%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ ++KHK+ KQ++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV M+
Sbjct: 465 VFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQ 524
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T T + G GK + KD PGF V R L P E +RL + G
Sbjct: 525 LLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLGPMTAEIMRLLQEGVD 584
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
A + K G+P+G LAD VGLD + + K + LL +LV
Sbjct: 585 PAELDKLTTKF--GFPVGAATLADEVGLDVAEHVAQFLGKALGPRLGGGSADLLSELVKA 642
Query: 150 GKLGVKTGEG 121
G G KTG+G
Sbjct: 643 GHKGRKTGKG 652
>AF000263-2|AAK21464.1| 755|Caenorhabditis elegans Hypothetical
protein T08B2.7b protein.
Length = 755
Score = 127 bits (306), Expect = 9e-30
Identities = 73/190 (38%), Positives = 103/190 (54%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ ++KHK+ KQ++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV M+
Sbjct: 439 VFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQ 498
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T T + G GK + KD PGF V R L P E +RL + G
Sbjct: 499 LLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLGPMTAEIMRLLQEGVD 558
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
A + K G+P+G LAD VGLD + + K + LL +LV
Sbjct: 559 PAELDKLTTKF--GFPVGAATLADEVGLDVAEHVAQFLGKALGPRLGGGSADLLSELVKA 616
Query: 150 GKLGVKTGEG 121
G G KTG+G
Sbjct: 617 GHKGRKTGKG 626
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -3
Query: 387 RLLVPYICEAIRLYERGD-ASARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFILDG 220
RL+ ++ EA+ E G AS D DIA G G+P GP D G D ++
Sbjct: 668 RLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADKLVKSMEK 727
Query: 219 WHKKFPDQQLFKPIPLLEKLVAEGK 145
+ + Q F+P LL+ GK
Sbjct: 728 FAGAYEAVQ-FEPCQLLKDHAKSGK 751
>AF000263-1|AAK21462.1| 781|Caenorhabditis elegans Hypothetical
protein T08B2.7a protein.
Length = 781
Score = 127 bits (306), Expect = 9e-30
Identities = 73/190 (38%), Positives = 103/190 (54%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ ++KHK+ KQ++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV M+
Sbjct: 465 VFEDLQLKHKVIKQIESVVGPNTIIASNTSALPIKDIAAASSRPDKVIGMHYFSPVEKMQ 524
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T T + G GK + KD PGF V R L P E +RL + G
Sbjct: 525 LLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLGPMTAEIMRLLQEGVD 584
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
A + K G+P+G LAD VGLD + + K + LL +LV
Sbjct: 585 PAELDKLTTKF--GFPVGAATLADEVGLDVAEHVAQFLGKALGPRLGGGSADLLSELVKA 642
Query: 150 GKLGVKTGEG 121
G G KTG+G
Sbjct: 643 GHKGRKTGKG 652
Score = 32.7 bits (71), Expect = 0.26
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Frame = -3
Query: 387 RLLVPYICEAIRLYERGD-ASARDIDIAMKLGAGYPM---GPLELADYVGLDTNKFILDG 220
RL+ ++ EA+ E G AS D DIA G G+P GP D G D ++
Sbjct: 694 RLVSRFVNEALLCLEEGVLASPSDGDIASVFGVGFPPFWGGPFRFVDLYGADKLVKSMEK 753
Query: 219 WHKKFPDQQLFKPIPLLEKLVAEGK 145
+ + Q F+P LL+ GK
Sbjct: 754 FAGAYEAVQ-FEPCQLLKDHAKSGK 777
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical protein
C29F3.1 protein.
Length = 755
Score = 120 bits (290), Expect = 7e-28
Identities = 68/190 (35%), Positives = 102/190 (53%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ +KHK+ +Q++ V +TI ASNTS+L I +IA+ R DK G+H+F+PV M+
Sbjct: 439 VFEDLPLKHKVIRQIENVVGPNTIIASNTSALPIKDIAAASSRSDKVIGMHYFSPVEKMQ 498
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRLYERGDA 331
LLE++ TS+ T T + G GK + KD PGF V R L P + E +RL + G
Sbjct: 499 LLEIITHDGTSKETLATAAQLGLKQGKLVVVVKDCPGFFVVRCLSPMMSEIVRLLQEG-V 557
Query: 330 SARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVAE 151
++D + G+P+G LAD GLD + + + + LL +LV
Sbjct: 558 EPSELD-KLTTKFGFPVGAATLADEAGLDVAEHVARYLGTALGPRVHGGSVDLLSELVRA 616
Query: 150 GKLGVKTGEG 121
G G KT +G
Sbjct: 617 GHKGRKTSKG 626
>Z81055-2|CAB02891.2| 437|Caenorhabditis elegans Hypothetical
protein F01G10.2 protein.
Length = 437
Score = 104 bits (249), Expect = 7e-23
Identities = 61/161 (37%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ ++K +LF +LD + IF +NTSSL +NE++SV++ K G+HFFNP ++R
Sbjct: 126 VFEDMKLKKELFTKLDKICKPSCIFGTNTSSLDLNEMSSVLRDPTKVVGIHFFNPANLIR 185
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRL-YERGD 334
++EV+ GS+TS T E +S+ K + + P FV NRLL Y+ ++ +L YE G
Sbjct: 186 MVEVIYGSKTSSKAVATAFEACRSIKKLPVLVGNCPAFVFNRLLGVYLNQSQKLMYEYG- 244
Query: 333 ASARDIDIAMKLGAGYPMGPLELADYVGLDTNKFIL--DGW 217
ID + G+ MGPL +AD GLD + + +GW
Sbjct: 245 YLPHQID-KIITNFGFLMGPLTVADMNGLDVMEKLKKENGW 284
>Z81055-3|CAB02892.2| 434|Caenorhabditis elegans Hypothetical
protein F01G10.3 protein.
Length = 434
Score = 100 bits (240), Expect = 9e-22
Identities = 64/192 (33%), Positives = 102/192 (53%), Gaps = 1/192 (0%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMR 511
+ E+ ++K +LF L+ + S IF +NTSSL +NEI+SV++ G+HFFNP V+R
Sbjct: 123 VIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIR 182
Query: 510 LLEVVKGSETSEATYKTMMEWGKSVGKTCITCKDTPGFVVNRLLVPYICEAIRL-YERGD 334
L+E++ GS TS T + +S+ K + + FV NRLL Y ++ +L YE G
Sbjct: 183 LVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYG- 241
Query: 333 ASARDIDIAMKLGAGYPMGPLELADYVGLDTNKFILDGWHKKFPDQQLFKPIPLLEKLVA 154
ID + G+ MGP+ +AD G D +K + +P P+ +++
Sbjct: 242 YLPHQID-KIITNFGFLMGPMTVADMNGFDV--------MEKLKKENGLEPNPIEKEMWR 292
Query: 153 EGKLGVKTGEGF 118
+ G KT +GF
Sbjct: 293 LKRYGRKTNKGF 304
>AC024201-11|ABQ13050.1| 284|Caenorhabditis elegans Hypothetical
protein Y71F9B.9a protein.
Length = 284
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = -3
Query: 684 ENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLL 505
E+ + + +K +D +A TI AS+TS++ ++ + K++ +H NP + L
Sbjct: 64 EDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFLPLT 123
Query: 504 EVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYICEAIRLYERGDAS 328
E+V TS+ T E +SV + + K + GFVVNRL + E RL G
Sbjct: 124 ELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIG 183
Query: 327 ARDIDIAMKLGAG 289
D+D M G G
Sbjct: 184 VNDVDAVMSAGLG 196
>AC024201-10|ABQ13051.1| 281|Caenorhabditis elegans Hypothetical
protein Y71F9B.9b protein.
Length = 281
Score = 60.1 bits (139), Expect = 1e-09
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Frame = -3
Query: 684 ENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDKFGGLHFFNPVPVMRLL 505
E+ + + +K +D +A TI AS+TS++ ++ + K++ +H NP + L
Sbjct: 64 EDLNFRIQFYKVIDEIADPTTILASSTSTIPASKFTDGLINKERCLIVHPVNPPLFLPLT 123
Query: 504 EVVKGSETSEATYKTMMEWGKSVGKTCITCK-DTPGFVVNRLLVPYICEAIRLYERGDAS 328
E+V TS+ T E +SV + + K + GFVVNRL + E RL G
Sbjct: 124 ELVPAPWTSQDTVDRAAEIMRSVKQEPVKLKKEVLGFVVNRLQFALLAETWRLVADGVIG 183
Query: 327 ARDIDIAMKLGAG 289
D+D M G G
Sbjct: 184 VNDVDAVMSAGLG 196
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = -3
Query: 690 IXENXEVKHKLFKQLDGVAPSHTIFASNTSSLSINEIASVVKRKDK 553
+ E E++ L L+ +PS F + S+S+ ++ S+ + +DK
Sbjct: 12 LMERMELQELLIVSLESKSPSQAAFGAPFGSMSVADLGSLTRLEDK 57
>U97192-2|AAO38678.1| 622|Caenorhabditis elegans Hypothetical
protein C01F4.2b protein.
Length = 622
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 491 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 625
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
>U97192-1|AAB52434.2| 986|Caenorhabditis elegans Hypothetical
protein C01F4.2a protein.
Length = 986
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 491 PLTTSSKRITGTGLKK*RPPNLSFLFTTDA-ISFIDREDVFDAKIV 625
P T +++TG LKK RP + SF + DA I +D + KIV
Sbjct: 487 PTTCEPQQVTGRFLKKQRPASASFSCSLDANIDDVDPHALQVPKIV 532
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,382,079
Number of Sequences: 27780
Number of extensions: 333260
Number of successful extensions: 756
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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