Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14a24
(655 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 367 e-101
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 367 e-101
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 367 e-101
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 347 2e-95
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 176 5e-44
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.002
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.003
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 41 0.003
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.014
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 6.3
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (903), Expect = e-101
Identities = 166/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 VGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (903), Expect = e-101
Identities = 166/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 VGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (903), Expect = e-101
Identities = 166/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 VGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (902), Expect = e-101
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 367 bits (902), Expect = e-101
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (902), Expect = e-101
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (902), Expect = e-101
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 367 bits (902), Expect = e-101
Identities = 165/203 (81%), Positives = 182/203 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 38 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 97
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 295
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV
Sbjct: 98 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKV 157
Query: 294 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQ 115
+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQ
Sbjct: 158 ISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQ 217
Query: 114 HIGKASTVKRGTSAGRKVGLIAA 46
HIGK ST++R AGRKVGLIAA
Sbjct: 218 HIGKPSTIRRDAPAGRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 347 bits (854), Expect = 2e-95
Identities = 157/194 (80%), Positives = 173/194 (89%)
Frame = -2
Query: 627 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 448
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 447 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 268
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 267 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVK 88
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 87 RGTSAGRKVGLIAA 46
R AGRKVGLIAA
Sbjct: 181 RDAPAGRKVGLIAA 194
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 176 bits (429), Expect = 5e-44
Identities = 79/97 (81%), Positives = 87/97 (89%)
Frame = -2
Query: 654 HGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLE 475
HGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L
Sbjct: 34 HGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLN 93
Query: 474 VGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 364
+GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 94 IGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 41.9 bits (94), Expect = 0.002
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Frame = -2
Query: 633 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 469
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 468 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 289
+ P+GA+P GT++ N+E + G + RA+G ++ + ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLPSKRQMQVL 237
Query: 288 SSNRGMVGIVAGGGRIDKPILKAGR 214
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = -2
Query: 633 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 469
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 468 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 289
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 288 SSNRGMVGIVAGGGRIDKPILKAGR 214
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.1 bits (92), Expect = 0.003
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Frame = -2
Query: 633 VKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGKKATL-EVG 469
V + +DP R A +A+V +RK IA E + G + + G+ A G
Sbjct: 126 VIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREG 179
Query: 468 NVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLP 289
+ P+GA+P GT++ N+E + G + RA+G ++ ++LPS + +
Sbjct: 180 DAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVL 237
Query: 288 SSNRGMVGIVAGGGRIDKPILKAGR 214
+ VG V+ + I KAGR
Sbjct: 238 ETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = -2
Query: 555 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 391
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 390 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 214
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 185 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 280
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,456,425
Number of Sequences: 237096
Number of extensions: 2793635
Number of successful extensions: 6514
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6512
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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