Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14a24
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p pro... 392 e-109
AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p pro... 392 e-109
AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal pr... 392 e-109
AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,... 392 e-109
AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,... 392 e-109
BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p pro... 356 2e-98
AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p pro... 43 3e-04
AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA... 43 3e-04
U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein. 34 0.19
DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge spli... 34 0.19
AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge prot... 34 0.19
AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA... 34 0.19
AY070942-1|AAL48564.1| 286|Drosophila melanogaster RE03883p pro... 29 7.3
AE013599-1623|AAF58435.2| 286|Drosophila melanogaster CG13321-P... 29 7.3
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 28 9.6
AE014298-1064|AAF46277.1| 667|Drosophila melanogaster CG15326-P... 28 9.6
>BT014913-1|AAT47764.1| 256|Drosophila melanogaster RH21963p
protein.
Length = 256
Score = 392 bits (966), Expect = e-109
Identities = 177/202 (87%), Positives = 191/202 (94%)
Frame = -2
Query: 651 GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 472
GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++
Sbjct: 39 GYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Query: 471 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 292
GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+
Sbjct: 99 GNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Query: 291 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQH
Sbjct: 159 PSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQH 218
Query: 111 IGKASTVKRGTSAGRKVGLIAA 46
IGKASTVKRGTSAGRKVGLIAA
Sbjct: 219 IGKASTVKRGTSAGRKVGLIAA 240
>AY071342-1|AAL48964.1| 256|Drosophila melanogaster RE37829p
protein.
Length = 256
Score = 392 bits (966), Expect = e-109
Identities = 177/202 (87%), Positives = 191/202 (94%)
Frame = -2
Query: 651 GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 472
GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++
Sbjct: 39 GYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Query: 471 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 292
GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+
Sbjct: 99 GNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Query: 291 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQH
Sbjct: 159 PSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQH 218
Query: 111 IGKASTVKRGTSAGRKVGLIAA 46
IGKASTVKRGTSAGRKVGLIAA
Sbjct: 219 IGKASTVKRGTSAGRKVGLIAA 240
>AF098520-1|AAF06828.1| 256|Drosophila melanogaster ribosomal
protein L8 protein.
Length = 256
Score = 392 bits (966), Expect = e-109
Identities = 177/202 (87%), Positives = 191/202 (94%)
Frame = -2
Query: 651 GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 472
GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++
Sbjct: 39 GYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Query: 471 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 292
GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+
Sbjct: 99 GNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Query: 291 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQH
Sbjct: 159 PSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQH 218
Query: 111 IGKASTVKRGTSAGRKVGLIAA 46
IGKASTVKRGTSAGRKVGLIAA
Sbjct: 219 IGKASTVKRGTSAGRKVGLIAA 240
>AE014296-477|AAF47660.1| 256|Drosophila melanogaster CG1263-PB,
isoform B protein.
Length = 256
Score = 392 bits (966), Expect = e-109
Identities = 177/202 (87%), Positives = 191/202 (94%)
Frame = -2
Query: 651 GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 472
GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++
Sbjct: 39 GYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Query: 471 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 292
GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+
Sbjct: 99 GNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Query: 291 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQH
Sbjct: 159 PSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQH 218
Query: 111 IGKASTVKRGTSAGRKVGLIAA 46
IGKASTVKRGTSAGRKVGLIAA
Sbjct: 219 IGKASTVKRGTSAGRKVGLIAA 240
>AE014296-476|AAF47659.1| 256|Drosophila melanogaster CG1263-PA,
isoform A protein.
Length = 256
Score = 392 bits (966), Expect = e-109
Identities = 177/202 (87%), Positives = 191/202 (94%)
Frame = -2
Query: 651 GYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEV 472
GYI+GVVKDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++
Sbjct: 39 GYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQI 98
Query: 471 GNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVL 292
GNVMP+ MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+
Sbjct: 99 GNVMPLSQMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVV 158
Query: 291 PSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
PS+NR MVGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQH
Sbjct: 159 PSANRAMVGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQH 218
Query: 111 IGKASTVKRGTSAGRKVGLIAA 46
IGKASTVKRGTSAGRKVGLIAA
Sbjct: 219 IGKASTVKRGTSAGRKVGLIAA 240
>BT022891-1|AAY55307.1| 579|Drosophila melanogaster IP12501p
protein.
Length = 579
Score = 356 bits (875), Expect = 2e-98
Identities = 159/184 (86%), Positives = 172/184 (93%)
Frame = -2
Query: 630 KDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVG 451
KDIIHDPGRGAPLAVVHFRDPY++K RKELFIAPEG++TGQFVYCG+KATL++GNVMP+
Sbjct: 1 KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60
Query: 450 AMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGM 271
MPEGTI+CNLEEK GDRGRLAR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR M
Sbjct: 61 QMPEGTIICNLEEKTGDRGRLARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAM 120
Query: 270 VGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV 91
VGIVAGGGRIDKPILKAGRAYHKYKVKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTV
Sbjct: 121 VGIVAGGGRIDKPILKAGRAYHKYKVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTV 180
Query: 90 KRGT 79
KR T
Sbjct: 181 KRRT 184
>AY113486-1|AAM29491.1| 294|Drosophila melanogaster RE45450p
protein.
Length = 294
Score = 43.2 bits (97), Expect = 3e-04
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = -2
Query: 636 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 457
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 456 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 310
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>AE014296-1910|AAF50091.1| 294|Drosophila melanogaster CG7636-PA
protein.
Length = 294
Score = 43.2 bits (97), Expect = 3e-04
Identities = 33/109 (30%), Positives = 54/109 (49%)
Frame = -2
Query: 636 VVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMP 457
+V +++ D R A +A+V D K+ E A + L T +F+ E G+ P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165
Query: 456 VGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPS 310
+GA+P GT + LE+ G L A+G F T++ ++ V+LPS
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTIL--RKFDEKVVVQLPS 212
>U47849-1|AAC47196.2| 829|Drosophila melanogaster Lozenge protein.
Length = 829
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 261 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>DQ397338-1|ABD59005.1| 705|Drosophila melanogaster Lozenge splice
variant protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 261 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>AF217651-2|AAF35308.1| 826|Drosophila melanogaster lozenge
protein.
Length = 826
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 261 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>AE014298-1325|AAF46486.2| 826|Drosophila melanogaster CG1689-PA
protein.
Length = 826
Score = 33.9 bits (74), Expect = 0.19
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -2
Query: 261 VAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQH 112
VAG GR+ + I +G ++H + + + PY +P HPH +H H
Sbjct: 90 VAGPGRLGRSINGSGGSHHHHHLHHHYSPYHHAHPYHP-PHPHAPHHHHH 138
>AY070942-1|AAL48564.1| 286|Drosophila melanogaster RE03883p
protein.
Length = 286
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 294 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 202
+ SS RG+V G V GG D + GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180
>AE013599-1623|AAF58435.2| 286|Drosophila melanogaster CG13321-PA
protein.
Length = 286
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -2
Query: 294 LPSSNRGMV-GIVAGGGRIDKPILKAGRAYHK 202
+ SS RG+V G V GG D + GRAYH+
Sbjct: 149 IASSGRGIVPGTVVGGHDADGDQIYVGRAYHE 180
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 28.3 bits (60), Expect = 9.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 189 RNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAG 70
++ WP + N E P GGG + +G A T RGT G
Sbjct: 1049 QSSWPRLE--TGNTTEKPAGGGTTE-VGAAGTAGRGTGGG 1085
>AE014298-1064|AAF46277.1| 667|Drosophila melanogaster CG15326-PA
protein.
Length = 667
Score = 28.3 bits (60), Expect = 9.6
Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 FMATPR-TYGQQLRLTLYLWYALPAFKIGLSIRPP 253
+M+ P YG++++ TL + L +G+ +RPP
Sbjct: 107 YMSMPTDAYGEEMQATLRFLWRLSVLNVGVVLRPP 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,214,897
Number of Sequences: 53049
Number of extensions: 823647
Number of successful extensions: 2812
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2811
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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