Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt14a10
(682 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021303-1|AAX33451.1| 584|Drosophila melanogaster RE19818p pro... 55 8e-08
AY118405-1|AAM48434.1| 584|Drosophila melanogaster RE62222p pro... 55 8e-08
AF271666-1|AAG33131.1| 567|Drosophila melanogaster matrix metal... 55 8e-08
AE013599-3937|AAM68327.1| 570|Drosophila melanogaster CG4859-PB... 55 8e-08
AE013599-3936|AAF47255.2| 613|Drosophila melanogaster CG4859-PA... 55 8e-08
BT021212-1|AAX33360.1| 758|Drosophila melanogaster SD03462p pro... 47 3e-05
AJ289232-1|CAC81969.1| 758|Drosophila melanogaster matrix metal... 47 3e-05
AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,... 47 3e-05
AE013599-906|AAS64885.1| 758|Drosophila melanogaster CG1794-PB,... 47 3e-05
X01918-3|CAA25994.1| 307|Drosophila melanogaster salivary gland... 30 2.5
AE014296-1961|AAF50056.1| 307|Drosophila melanogaster CG11720-P... 30 2.5
>BT021303-1|AAX33451.1| 584|Drosophila melanogaster RE19818p
protein.
Length = 584
Score = 55.2 bits (127), Expect = 8e-08
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFND 599
P+N+DAAL+YTNGYTYFFKG Y+RF+D
Sbjct: 443 PNNLDAALKYTNGYTYFFKGDKYYRFHD 470
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFNDR 596
P NIDAA Y NG TYFFKG YWR+ R
Sbjct: 348 PGNIDAAFTYKNGKTYFFKGTQYWRYQGR 376
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 591 FSVDTDNPQFPRSTAFWWLGCSSAPRGTVGVV 496
F+VD+ P FPR TA WW GC + P T +V
Sbjct: 473 FAVDSATPPFPRPTAHWWFGCKNTPSSTGNIV 504
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 682 PDNIDAALQYT-NGYTYFFKGGSYWRFN 602
PD++DAA+ + NG YFFKG +WRF+
Sbjct: 394 PDHLDAAMVWGGNGKIYFFKGSKFWRFD 421
>AY118405-1|AAM48434.1| 584|Drosophila melanogaster RE62222p
protein.
Length = 584
Score = 55.2 bits (127), Expect = 8e-08
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFND 599
P+N+DAAL+YTNGYTYFFKG Y+RF+D
Sbjct: 443 PNNLDAALKYTNGYTYFFKGDKYYRFHD 470
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFNDR 596
P NIDAA Y NG TYFFKG YWR+ R
Sbjct: 348 PGNIDAAFTYKNGKTYFFKGTQYWRYQGR 376
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 591 FSVDTDNPQFPRSTAFWWLGCSSAPRGTVGVV 496
F+VD+ P FPR TA WW GC + P T +V
Sbjct: 473 FAVDSATPPFPRPTAHWWFGCKNTPSSTGNIV 504
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 682 PDNIDAALQYT-NGYTYFFKGGSYWRFN 602
PD++DAA+ + NG YFFKG +WRF+
Sbjct: 394 PDHLDAAMVWGGNGKIYFFKGSKFWRFD 421
>AF271666-1|AAG33131.1| 567|Drosophila melanogaster matrix
metalloproteinase 1 protein.
Length = 567
Score = 55.2 bits (127), Expect = 8e-08
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFND 599
P+N+DAAL+YTNGYTYFFKG Y+RF+D
Sbjct: 469 PNNLDAALKYTNGYTYFFKGDKYYRFHD 496
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFNDR 596
P NIDAA Y NG TYFFKG YWR+ R
Sbjct: 374 PGNIDAAFTYKNGKTYFFKGTQYWRYQGR 402
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 591 FSVDTDNPQFPRSTAFWWLGCSSAPRGTVGVV 496
F+VD+ P FPR TA WW GC + P T +V
Sbjct: 499 FAVDSATPPFPRPTAHWWFGCKNTPSSTGNIV 530
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 682 PDNIDAALQYT-NGYTYFFKGGSYWRFN 602
PD++DAA+ + NG YFFKG +WRF+
Sbjct: 420 PDHLDAAMVWGGNGKIYFFKGSKFWRFD 447
>AE013599-3937|AAM68327.1| 570|Drosophila melanogaster CG4859-PB,
isoform B protein.
Length = 570
Score = 55.2 bits (127), Expect = 8e-08
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFND 599
P+N+DAAL+YTNGYTYFFKG Y+RF+D
Sbjct: 472 PNNLDAALKYTNGYTYFFKGDKYYRFHD 499
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFNDR 596
P NIDAA Y NG TYFFKG YWR+ R
Sbjct: 377 PGNIDAAFTYKNGKTYFFKGTQYWRYQGR 405
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 591 FSVDTDNPQFPRSTAFWWLGCSSAPRGTVGVV 496
F+VD+ P FPR TA WW GC + P T +V
Sbjct: 502 FAVDSATPPFPRPTAHWWFGCKNTPSSTGNIV 533
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 682 PDNIDAALQYT-NGYTYFFKGGSYWRFN 602
PD++DAA+ + NG YFFKG +WRF+
Sbjct: 423 PDHLDAAMVWGGNGKIYFFKGSKFWRFD 450
>AE013599-3936|AAF47255.2| 613|Drosophila melanogaster CG4859-PA,
isoform A protein.
Length = 613
Score = 55.2 bits (127), Expect = 8e-08
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFND 599
P+N+DAAL+YTNGYTYFFKG Y+RF+D
Sbjct: 472 PNNLDAALKYTNGYTYFFKGDKYYRFHD 499
Score = 47.6 bits (108), Expect = 2e-05
Identities = 19/29 (65%), Positives = 20/29 (68%)
Frame = -1
Query: 682 PDNIDAALQYTNGYTYFFKGGSYWRFNDR 596
P NIDAA Y NG TYFFKG YWR+ R
Sbjct: 377 PGNIDAAFTYKNGKTYFFKGTQYWRYQGR 405
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 591 FSVDTDNPQFPRSTAFWWLGCSSAPRGTVGVV 496
F+VD+ P FPR TA WW GC + P T +V
Sbjct: 502 FAVDSATPPFPRPTAHWWFGCKNTPSSTGNIV 533
Score = 37.9 bits (84), Expect = 0.013
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -1
Query: 682 PDNIDAALQYT-NGYTYFFKGGSYWRFN 602
PD++DAA+ + NG YFFKG +WRF+
Sbjct: 423 PDHLDAAMVWGGNGKIYFFKGSKFWRFD 450
>BT021212-1|AAX33360.1| 758|Drosophila melanogaster SD03462p
protein.
Length = 758
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1
Query: 676 NIDAALQYTNGYTYFFKGGSYWRFNDRFVQRGHRQPSVPA 557
NIDAA QY +G TYFFK YW FND ++ H + + A
Sbjct: 662 NIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSA 701
>AJ289232-1|CAC81969.1| 758|Drosophila melanogaster matrix
metalloproteinase 2-MMP protein.
Length = 758
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1
Query: 676 NIDAALQYTNGYTYFFKGGSYWRFNDRFVQRGHRQPSVPA 557
NIDAA QY +G TYFFK YW FND ++ H + + A
Sbjct: 662 NIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSA 701
>AE013599-907|AAF58911.5| 1136|Drosophila melanogaster CG1794-PA,
isoform A protein.
Length = 1136
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1
Query: 676 NIDAALQYTNGYTYFFKGGSYWRFNDRFVQRGHRQPSVPA 557
NIDAA QY +G TYFFK YW FND ++ H + + A
Sbjct: 1040 NIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSA 1079
>AE013599-906|AAS64885.1| 758|Drosophila melanogaster CG1794-PB,
isoform B protein.
Length = 758
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = -1
Query: 676 NIDAALQYTNGYTYFFKGGSYWRFNDRFVQRGHRQPSVPA 557
NIDAA QY +G TYFFK YW FND ++ H + + A
Sbjct: 662 NIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSA 701
>X01918-3|CAA25994.1| 307|Drosophila melanogaster salivary gland
glue protein protein.
Length = 307
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 675 TSTPPCSTLTDTPTSSRGDHTGDSTTDLFSVDTDNPQFPRST 550
T+ PPC+T T T T++ T STT T P P+ T
Sbjct: 39 TTQPPCTTTTTTTTTTCAPPTQQSTTQP-PCTTSKPTTPKQT 79
>AE014296-1961|AAF50056.1| 307|Drosophila melanogaster CG11720-PA
protein.
Length = 307
Score = 30.3 bits (65), Expect = 2.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -2
Query: 675 TSTPPCSTLTDTPTSSRGDHTGDSTTDLFSVDTDNPQFPRST 550
T+ PPC+T T T T++ T STT T P P+ T
Sbjct: 39 TTQPPCTTTTTTTTTTCAPPTQQSTTQP-PCTTSKPTTPKQT 79
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,681,725
Number of Sequences: 53049
Number of extensions: 582423
Number of successful extensions: 1780
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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