Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt14a04
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053348-1|AAH53348.1|  553|Homo sapiens solute carrier family 2...    29   7.7  
AY358183-1|AAQ88550.1|  445|Homo sapiens SLC22A12 protein.             29   7.7  
AC044790-2|AAK68156.1|  553|Homo sapiens RST protein.                  29   7.7  
AB071863-1|BAB96750.1|  553|Homo sapiens URAT1 protein.                29   7.7  
AB050269-1|BAB68364.1|  552|Homo sapiens organic anion transpote...    29   7.7  

>BC053348-1|AAH53348.1|  553|Homo sapiens solute carrier family 22
           (organic anion/cation transporter), member 12 protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 177 TFLWHGFLTFTFMGLCLDWKRIGSFIF 97
           T  W  F  FTF GL LD + +GS IF
Sbjct: 354 TLCWFAF-GFTFFGLALDLQALGSNIF 379


>AY358183-1|AAQ88550.1|  445|Homo sapiens SLC22A12 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 177 TFLWHGFLTFTFMGLCLDWKRIGSFIF 97
           T  W  F  FTF GL LD + +GS IF
Sbjct: 246 TLCWFAF-GFTFFGLALDLQALGSNIF 271


>AC044790-2|AAK68156.1|  553|Homo sapiens RST protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 177 TFLWHGFLTFTFMGLCLDWKRIGSFIF 97
           T  W  F  FTF GL LD + +GS IF
Sbjct: 354 TLCWFAF-GFTFFGLALDLQALGSNIF 379


>AB071863-1|BAB96750.1|  553|Homo sapiens URAT1 protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 177 TFLWHGFLTFTFMGLCLDWKRIGSFIF 97
           T  W  F  FTF GL LD + +GS IF
Sbjct: 354 TLCWFAF-GFTFFGLALDLQALGSNIF 379


>AB050269-1|BAB68364.1|  552|Homo sapiens organic anion transpoter 4
           like protein protein.
          Length = 552

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -2

Query: 177 TFLWHGFLTFTFMGLCLDWKRIGSFIF 97
           T  W  F  FTF GL LD + +GS IF
Sbjct: 353 TLCWFAF-GFTFFGLALDLQALGSNIF 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,490,222
Number of Sequences: 237096
Number of extensions: 1128538
Number of successful extensions: 1875
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1875
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)