Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13p18
(268 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein. 101 1e-22
AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-P... 101 1e-22
AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-P... 101 1e-22
AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-P... 101 1e-22
AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p pro... 84 3e-17
AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB... 29 1.2
AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA... 27 2.7
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 27 3.6
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 27 3.6
Y12498-1|CAA73100.1| 506|Drosophila melanogaster p60 protein. 27 4.8
Y11143-1|CAA72030.1| 506|Drosophila melanogaster phosphatidylin... 27 4.8
U39303-1|AAB34134.1| 439|Drosophila melanogaster P26s4 protein. 27 4.8
AY060429-1|AAL25468.1| 506|Drosophila melanogaster LD42724p pro... 27 4.8
AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC... 27 4.8
AE014134-81|AAF51510.2| 506|Drosophila melanogaster CG2699-PA p... 27 4.8
AY058759-1|AAL13988.1| 439|Drosophila melanogaster SD02658p pro... 26 6.3
AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p pro... 26 6.3
AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-P... 26 6.3
AE014297-3409|AAF56205.1| 439|Drosophila melanogaster CG5289-PA... 26 6.3
AF181625-1|AAD55411.1| 770|Drosophila melanogaster semaphorin-l... 26 8.3
AF007158-1|AAC19159.1| 770|Drosophila melanogaster similar to s... 26 8.3
AE013599-2532|AAS64817.1| 770|Drosophila melanogaster CG6446-PB... 26 8.3
AE013599-2531|AAF57816.1| 770|Drosophila melanogaster CG6446-PA... 26 8.3
>U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein.
Length = 76
Score = 101 bits (243), Expect = 1e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARA 42
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKRY 60
Query: 41 AERKATPRSK 12
ER A+ + K
Sbjct: 61 NERIASQKGK 70
>AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-PC,
isoform C protein.
Length = 76
Score = 101 bits (243), Expect = 1e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARA 42
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKRY 60
Query: 41 AERKATPRSK 12
ER A+ + K
Sbjct: 61 NERIASQKGK 70
>AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-PB,
isoform B protein.
Length = 76
Score = 101 bits (243), Expect = 1e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARA 42
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKRY 60
Query: 41 AERKATPRSK 12
ER A+ + K
Sbjct: 61 NERIASQKGK 70
>AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-PA,
isoform A protein.
Length = 76
Score = 101 bits (243), Expect = 1e-22
Identities = 46/70 (65%), Positives = 55/70 (78%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARA 42
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQR+ +KGNL + + R
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKGNLSREESVKRY 60
Query: 41 AERKATPRSK 12
ER A+ + K
Sbjct: 61 NERIASQKGK 70
>AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p
protein.
Length = 56
Score = 83.8 bits (198), Expect = 3e-17
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFLRNQRF 87
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTLGMD KFL NQ +
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQHY 45
>AE014297-506|AAS65120.1| 777|Drosophila melanogaster CG31481-PB,
isoform B protein.
Length = 777
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 224 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST--LGMDPKFLRNQRFCKKGNLKPAKQL 51
K K+ N+NQ + +NG+ + +T + +T L ++ +F N+ C+ ++ A L
Sbjct: 171 KKTSRKSSNNNNQGDNSIKNGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASL 230
>AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA
protein.
Length = 604
Score = 27.5 bits (58), Expect = 2.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 164 HFCELCGFGYDLYDSLTLPF 223
HF C +GYD + ++T PF
Sbjct: 313 HFKVTCEYGYDFWKTVTFPF 332
>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
isoform B protein.
Length = 3313
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 212 SKNHTNHNQNRKAHRNG 162
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
isoform A protein.
Length = 3313
Score = 27.1 bits (57), Expect = 3.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 212 SKNHTNHNQNRKAHRNG 162
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>Y12498-1|CAA73100.1| 506|Drosophila melanogaster p60 protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 147 EDQARIHPWHGSKIFK-ESKVLQEG*PEASQATRE 46
ED+ R+ PW+ +I + E+K + G P+ S R+
Sbjct: 24 EDELRMAPWYWGRISREEAKSILHGKPDGSFLVRD 58
>Y11143-1|CAA72030.1| 506|Drosophila melanogaster
phosphatidylinositol 3-kinaseregulatory subunit protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 147 EDQARIHPWHGSKIFK-ESKVLQEG*PEASQATRE 46
ED+ R+ PW+ +I + E+K + G P+ S R+
Sbjct: 24 EDELRMAPWYWGRISREEAKSILHGKPDGSFLVRD 58
>U39303-1|AAB34134.1| 439|Drosophila melanogaster P26s4 protein.
Length = 439
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -3
Query: 170 RNGIKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATPRSKG 9
R +K + R + L M+ +F+RNQ K + K ++ ++ + + TP S G
Sbjct: 56 RARLKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVG 109
>AY060429-1|AAL25468.1| 506|Drosophila melanogaster LD42724p
protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 147 EDQARIHPWHGSKIFK-ESKVLQEG*PEASQATRE 46
ED+ R+ PW+ +I + E+K + G P+ S R+
Sbjct: 24 EDELRMAPWYWGRISREEAKSILHGKPDGSFLVRD 58
>AE014297-505|AAS65119.1| 777|Drosophila melanogaster CG31481-PC,
isoform C protein.
Length = 777
Score = 26.6 bits (56), Expect = 4.8
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 224 KMAKSKNHTNHNQNRKAHRNGIKKPRKTRHEST--LGMDPKFLRNQRFCKKGNLKPAKQL 51
K K+ N+NQ NG+ + +T + +T L ++ +F N+ C+ ++ A L
Sbjct: 171 KKTSRKSSNNNNQAEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASL 230
>AE014134-81|AAF51510.2| 506|Drosophila melanogaster CG2699-PA
protein.
Length = 506
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 147 EDQARIHPWHGSKIFK-ESKVLQEG*PEASQATRE 46
ED+ R+ PW+ +I + E+K + G P+ S R+
Sbjct: 24 EDELRMAPWYWGRISREEAKSILHGKPDGSFLVRD 58
>AY058759-1|AAL13988.1| 439|Drosophila melanogaster SD02658p
protein.
Length = 439
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 161 IKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATPRSKG 9
+K + R + L M+ +F+RNQ K + K ++ ++ + + TP S G
Sbjct: 59 LKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVG 109
>AY058706-1|AAL13935.1| 1556|Drosophila melanogaster LD43050p protein.
Length = 1556
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIK 156
+A+ NH NHNQ ++ H+ +K
Sbjct: 1084 VAEPANHHNHNQGQQNHQGHLK 1105
>AE014298-2605|AAF48759.2| 1556|Drosophila melanogaster CG32560-PA
protein.
Length = 1556
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = -3
Query: 221 MAKSKNHTNHNQNRKAHRNGIK 156
+A+ NH NHNQ ++ H+ +K
Sbjct: 1084 VAEPANHHNHNQGQQNHQGHLK 1105
>AE014297-3409|AAF56205.1| 439|Drosophila melanogaster CG5289-PA
protein.
Length = 439
Score = 26.2 bits (55), Expect = 6.3
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = -3
Query: 161 IKKPRKTRHESTLGMDPKFLRNQRFCKKGNLKPAKQLARAAERKATPRSKG 9
+K + R + L M+ +F+RNQ K + K ++ ++ + + TP S G
Sbjct: 59 LKLLKLERIKDYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVG 109
>AF181625-1|AAD55411.1| 770|Drosophila melanogaster semaphorin-like
protein.
Length = 770
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 215 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFL 102
K+K+ Q ++HRN KP + +H++T G D L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719
>AF007158-1|AAC19159.1| 770|Drosophila melanogaster similar to
semaphorin-I protein.
Length = 770
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 215 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFL 102
K+K+ Q ++HRN KP + +H++T G D L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719
>AE013599-2532|AAS64817.1| 770|Drosophila melanogaster CG6446-PB,
isoform B protein.
Length = 770
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 215 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFL 102
K+K+ Q ++HRN KP + +H++T G D L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719
>AE013599-2531|AAF57816.1| 770|Drosophila melanogaster CG6446-PA,
isoform A protein.
Length = 770
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -3
Query: 215 KSKNHTNHNQNRKAHRNGIKKPRKTRHESTLGMDPKFL 102
K+K+ Q ++HRN KP + +H++T G D L
Sbjct: 683 KAKSRLMEAQMDESHRNHFGKPMQFKHQNT-GKDINLL 719
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,987,531
Number of Sequences: 53049
Number of extensions: 217090
Number of successful extensions: 949
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 24,988,368
effective HSP length: 67
effective length of database: 21,434,085
effective search space used: 450115785
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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