Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13p10
(221 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT016084-1|AAV36969.1| 359|Drosophila melanogaster LD45683p pro... 27 2.7
AY122167-1|AAM52679.1| 361|Drosophila melanogaster LD24586p pro... 27 2.7
BT001555-1|AAN71310.1| 828|Drosophila melanogaster RE12363p pro... 26 6.2
AE014134-2006|AAF53045.1| 827|Drosophila melanogaster CG16833-P... 26 6.2
AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-P... 26 6.2
AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-P... 26 6.2
BT025954-1|ABG02198.1| 132|Drosophila melanogaster IP15522p pro... 26 8.2
BT025890-1|ABG02134.1| 236|Drosophila melanogaster IP02096p pro... 26 8.2
AY075299-1|AAL68166.1| 228|Drosophila melanogaster AT31109p pro... 26 8.2
AE014297-2935|AAF55854.2| 228|Drosophila melanogaster CG5793-PA... 26 8.2
>BT016084-1|AAV36969.1| 359|Drosophila melanogaster LD45683p
protein.
Length = 359
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 10 VNAILYLHTKFIIMTRRI*KKKQQPFCLILPRVASVPSPWKYTIWNKFQFVKKLHSRRR 186
VNAI L T+ + I K +P +LPR+ P P T W KF K + +++
Sbjct: 79 VNAIWELPTERV--DESIVAKLPEP-TTVLPRLRKPPGPRPLTKWEKFAKEKGISKKKK 134
>AY122167-1|AAM52679.1| 361|Drosophila melanogaster LD24586p
protein.
Length = 361
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 10 VNAILYLHTKFIIMTRRI*KKKQQPFCLILPRVASVPSPWKYTIWNKFQFVKKLHSRRR 186
VNAI L T+ + I K +P +LPR+ P P T W KF K + +++
Sbjct: 81 VNAIWELPTERV--DESIVAKLPEP-TTVLPRLRKPPGPRPLTKWEKFAKEKGISKKKK 136
>BT001555-1|AAN71310.1| 828|Drosophila melanogaster RE12363p
protein.
Length = 828
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 192 KHSSSTV*FFNKLKFVPNCIFPRRRH-*SYAR*N*TKWLL 76
KHS+ F + +PN + RRH YA+ N TKW++
Sbjct: 401 KHSNKEFGFMPRTYIIPNDLGALRRHWPKYAQRN-TKWII 439
>AE014134-2006|AAF53045.1| 827|Drosophila melanogaster CG16833-PA,
isoform A protein.
Length = 827
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 192 KHSSSTV*FFNKLKFVPNCIFPRRRH-*SYAR*N*TKWLL 76
KHS+ F + +PN + RRH YA+ N TKW++
Sbjct: 401 KHSNKEFGFMPRTYIIPNDLGALRRHWPKYAQRN-TKWII 439
>AE014134-2005|AAN10771.1| 1070|Drosophila melanogaster CG16833-PC,
isoform C protein.
Length = 1070
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 192 KHSSSTV*FFNKLKFVPNCIFPRRRH-*SYAR*N*TKWLL 76
KHS+ F + +PN + RRH YA+ N TKW++
Sbjct: 644 KHSNKEFGFMPRTYIIPNDLGALRRHWPKYAQRN-TKWII 682
>AE014134-2004|AAN10770.1| 1070|Drosophila melanogaster CG16833-PB,
isoform B protein.
Length = 1070
Score = 26.2 bits (55), Expect = 6.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 192 KHSSSTV*FFNKLKFVPNCIFPRRRH-*SYAR*N*TKWLL 76
KHS+ F + +PN + RRH YA+ N TKW++
Sbjct: 644 KHSNKEFGFMPRTYIIPNDLGALRRHWPKYAQRN-TKWII 682
>BT025954-1|ABG02198.1| 132|Drosophila melanogaster IP15522p
protein.
Length = 132
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 101 GKIKQNGCCFFFQIRLVIIINFVCKY 24
G +KQNGC ++ II++V KY
Sbjct: 64 GDLKQNGCTADLIFKVPDIISYVSKY 89
>BT025890-1|ABG02134.1| 236|Drosophila melanogaster IP02096p
protein.
Length = 236
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 101 GKIKQNGCCFFFQIRLVIIINFVCKY 24
G +KQNGC ++ II++V KY
Sbjct: 168 GDLKQNGCTADLIFKVPDIISYVSKY 193
>AY075299-1|AAL68166.1| 228|Drosophila melanogaster AT31109p
protein.
Length = 228
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 101 GKIKQNGCCFFFQIRLVIIINFVCKY 24
G +KQNGC ++ II++V KY
Sbjct: 160 GDLKQNGCTADLIFKVPDIISYVSKY 185
>AE014297-2935|AAF55854.2| 228|Drosophila melanogaster CG5793-PA
protein.
Length = 228
Score = 25.8 bits (54), Expect = 8.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 101 GKIKQNGCCFFFQIRLVIIINFVCKY 24
G +KQNGC ++ II++V KY
Sbjct: 160 GDLKQNGCTADLIFKVPDIISYVSKY 185
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,972,074
Number of Sequences: 53049
Number of extensions: 146776
Number of successful extensions: 260
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 24,988,368
effective HSP length: 53
effective length of database: 22,176,771
effective search space used: 443535420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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