Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13o08
(630 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.9
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 1.9
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 23 3.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 3.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 3.2
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.9
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 21 9.9
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 67 HNFRNAIKNNFITSYRLTYYYN 132
+N N NN+ T+Y+ YYN
Sbjct: 95 NNNYNNYNNNYNTNYKKLQYYN 116
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.4 bits (48), Expect = 1.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 297 IHTFFICWAWYY 262
I FFICW YY
Sbjct: 266 IAVFFICWTPYY 277
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 291 TFFICWAWYY 262
TFFICWA ++
Sbjct: 268 TFFICWAPFH 277
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 79 NAIKNNFITSYRLTYYYN 132
N NN+ T+Y+ YYN
Sbjct: 95 NNYNNNYNTNYKKLQYYN 112
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 237 KYHEVTKYCSTKPNI*KMYVFKSWPSQ*LH 326
K HE T C KP + ++K+ LH
Sbjct: 2 KEHEATGTCQKKPTKLRNLIYKTEAFDSLH 31
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 321 VIGLAKI*IHTFFICWAWYY 262
VI + + FFICWA ++
Sbjct: 268 VIKMLSAVVILFFICWAPFH 287
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 21.0 bits (42), Expect = 9.9
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 569 GLK*APADVQPFVLSPN 619
GL+ A A VQP V+S N
Sbjct: 572 GLRVADASVQPQVISGN 588
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,505
Number of Sequences: 438
Number of extensions: 3667
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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