Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmmt13o05
(702 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U94175-1|AAC51919.1| 445|Homo sapiens mammary tumor-associated ... 335 1e-91
U85947-1|AAB88873.1| 445|Homo sapiens Int-6 protein. 335 1e-91
U62962-1|AAB58251.1| 445|Homo sapiens Int-6 protein. 335 1e-91
U54562-1|AAC51760.1| 445|Homo sapiens eIF3-p48 protein. 335 1e-91
CR542275-1|CAG47071.1| 445|Homo sapiens EIF3S6 protein. 335 1e-91
BC021679-1|AAH21679.1| 445|Homo sapiens eukaryotic translation ... 335 1e-91
BC017887-1|AAH17887.1| 445|Homo sapiens eukaryotic translation ... 335 1e-91
BC016706-1|AAH16706.1| 445|Homo sapiens eukaryotic translation ... 335 1e-91
BC008419-1|AAH08419.1| 445|Homo sapiens eukaryotic translation ... 335 1e-91
BC000734-1|AAH00734.1| 445|Homo sapiens eukaryotic translation ... 335 1e-91
CR457029-1|CAG33310.1| 445|Homo sapiens EIF3S6 protein. 334 2e-91
U94174-1|AAC51917.1| 445|Homo sapiens mammary tumor-associated ... 327 2e-89
AK222679-1|BAD96399.1| 456|Homo sapiens proteasome 26S non-ATPa... 34 0.43
BC065826-1|AAH65826.1| 397|Homo sapiens proteasome (prosome, ma... 34 0.57
BC019062-1|AAH19062.1| 456|Homo sapiens proteasome (prosome, ma... 34 0.57
AB003103-1|BAA19749.1| 456|Homo sapiens 26S proteasome subunit ... 34 0.57
>U94175-1|AAC51919.1| 445|Homo sapiens mammary tumor-associated
protein INT6 protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>U85947-1|AAB88873.1| 445|Homo sapiens Int-6 protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>U62962-1|AAB58251.1| 445|Homo sapiens Int-6 protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>U54562-1|AAC51760.1| 445|Homo sapiens eIF3-p48 protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>CR542275-1|CAG47071.1| 445|Homo sapiens EIF3S6 protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>BC021679-1|AAH21679.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>BC017887-1|AAH17887.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>BC016706-1|AAH16706.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>BC008419-1|AAH08419.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>BC000734-1|AAH00734.1| 445|Homo sapiens eukaryotic translation
initiation factor 3, subunit 6 48kDa protein.
Length = 445
Score = 335 bits (823), Expect = 1e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>CR457029-1|CAG33310.1| 445|Homo sapiens EIF3S6 protein.
Length = 445
Score = 334 bits (820), Expect = 2e-91
Identities = 156/227 (68%), Positives = 187/227 (82%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRLVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFETFCRIHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETFCRIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++E+ SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIEKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>U94174-1|AAC51917.1| 445|Homo sapiens mammary tumor-associated
protein INT6 protein.
Length = 445
Score = 327 bits (804), Expect = 2e-89
Identities = 153/227 (67%), Positives = 184/227 (81%), Gaps = 5/227 (2%)
Frame = -3
Query: 700 VHWSLFVFFNHVKGRDLIIEMFLYKPLYLNAIQTMCPHILRYLATAVIIN---RSRRNAL 530
+HWSLFVFFNH KGRD II++FLY+P YLNAIQTMCPHILRYL TAVI N R RR L
Sbjct: 215 IHWSLFVFFNHPKGRDNIIDLFLYQPQYLNAIQTMCPHILRYLTTAVITNKDVRKRRQVL 274
Query: 529 KDLVKVIQQEAYTYRDPITEFIEHLYVNFDFEAARRKLNQCQAVLLTDFFLIACLEEFVE 350
KDLVKVIQQE+YTY+DPITEF+E LYVNFDF+ A++KL +C++VL+ DFFL+ACLE+F+E
Sbjct: 275 KDLVKVIQQESYTYKDPITEFVECLYVNFDFDGAQKKLRECESVLVNDFFLVACLEDFIE 334
Query: 349 NARLMIFETFCRIHQVISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMG 170
NARL IFET C IHQ ISI MLA+ LNM P+EAE WIVNLIRNARLDAKIDSKLGHVVMG
Sbjct: 335 NARLFIFETXCXIHQCISINMLADKLNMTPEEAERWIVNLIRNARLDAKIDSKLGHVVMG 394
Query: 169 AQPLSPYQQLVERIDSLAVRSEALTSLVERK--HKARNQDIRWGAQE 35
+SPYQQ++ + SL+ RS+ L +E+K +R++ W Q+
Sbjct: 395 NNAVSPYQQVIXKTKSLSFRSQMLAMNIEKKLNQNSRSEAPNWATQD 441
>AK222679-1|BAD96399.1| 456|Homo sapiens proteasome 26S non-ATPase
subunit 12 isoform 1 variant protein.
Length = 456
Score = 34.3 bits (75), Expect = 0.43
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -3
Query: 301 ISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMGAQPLSPYQQL---VER 131
I++ +A+ L++ DE+E ++ NL+ N + AK+D +L ++ +P P L ++
Sbjct: 373 ITMKRMAQLLDLSVDESEAFLSNLVDNKTIFAKVD-RLAGIINFQRPKDPNNLLNDWSQK 431
Query: 130 IDSLAVRSEALTSLVERKHKARN 62
++SL T L+ ++ N
Sbjct: 432 LNSLMSLVNKTTHLIAKEEMIHN 454
>BC065826-1|AAH65826.1| 397|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 12 protein.
Length = 397
Score = 33.9 bits (74), Expect = 0.57
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -3
Query: 301 ISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMGAQPLSPYQQL---VER 131
I++ +A+ L++ DE+E ++ NL+ N + AK+D +L ++ +P P L ++
Sbjct: 314 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVD-RLAGIINFQRPKDPNNLLNDWSQK 372
Query: 130 IDSLAVRSEALTSLVERKHKARN 62
++SL T L+ ++ N
Sbjct: 373 LNSLMSLVNKTTHLIAKEEMIHN 395
>BC019062-1|AAH19062.1| 456|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 12 protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.57
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -3
Query: 301 ISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMGAQPLSPYQQL---VER 131
I++ +A+ L++ DE+E ++ NL+ N + AK+D +L ++ +P P L ++
Sbjct: 373 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVD-RLAGIINFQRPKDPNNLLNDWSQK 431
Query: 130 IDSLAVRSEALTSLVERKHKARN 62
++SL T L+ ++ N
Sbjct: 432 LNSLMSLVNKTTHLIAKEEMIHN 454
>AB003103-1|BAA19749.1| 456|Homo sapiens 26S proteasome subunit p55
protein.
Length = 456
Score = 33.9 bits (74), Expect = 0.57
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -3
Query: 301 ISIGMLAENLNMQPDEAECWIVNLIRNARLDAKIDSKLGHVVMGAQPLSPYQQL---VER 131
I++ +A+ L++ DE+E ++ NL+ N + AK+D +L ++ +P P L ++
Sbjct: 373 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVD-RLAGIINFQRPKDPNNLLNDWSQK 431
Query: 130 IDSLAVRSEALTSLVERKHKARN 62
++SL T L+ ++ N
Sbjct: 432 LNSLMSLVNKTTHLIAKEEMIHN 454
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,781,944
Number of Sequences: 237096
Number of extensions: 1870384
Number of successful extensions: 4081
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4069
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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