Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmmt13n16
         (268 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021165-1|AAH21165.1|  609|Homo sapiens ZNF503 protein protein.       27   8.1  
BC013011-1|AAH13011.1|  609|Homo sapiens ZNF503 protein protein.       27   8.1  
BC011625-1|AAH11625.1|  646|Homo sapiens zinc finger protein 503...    27   8.1  
BC007494-1|AAH07494.1|  283|Homo sapiens ZNF503 protein protein.       27   8.1  

>BC021165-1|AAH21165.1|  609|Homo sapiens ZNF503 protein protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 185 TARYRSRVHPYYLEPLRSSPV 247
           TAR    +HP YL+PL S+PV
Sbjct: 81  TARTGHILHPEYLQPLPSTPV 101


>BC013011-1|AAH13011.1|  609|Homo sapiens ZNF503 protein protein.
          Length = 609

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 185 TARYRSRVHPYYLEPLRSSPV 247
           TAR    +HP YL+PL S+PV
Sbjct: 81  TARTGHILHPEYLQPLPSTPV 101


>BC011625-1|AAH11625.1|  646|Homo sapiens zinc finger protein 503
           protein.
          Length = 646

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 185 TARYRSRVHPYYLEPLRSSPV 247
           TAR    +HP YL+PL S+PV
Sbjct: 81  TARTGHILHPEYLQPLPSTPV 101


>BC007494-1|AAH07494.1|  283|Homo sapiens ZNF503 protein protein.
          Length = 283

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +2

Query: 185 TARYRSRVHPYYLEPLRSSPV 247
           TAR    +HP YL+PL S+PV
Sbjct: 81  TARTGHILHPEYLQPLPSTPV 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,706,398
Number of Sequences: 237096
Number of extensions: 790075
Number of successful extensions: 1130
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 76,859,062
effective HSP length: 66
effective length of database: 61,210,726
effective search space used: 1346635972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)